mRNA_M-pyrifera_M_contig112743.2648.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: A0A7S4HMI6_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HMI6_9EUKA) HSP 1 Score: 101 bits (252), Expect = 2.070e-23 Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYPRSLGTPYPANDITVTVTVTNDGRNFSNKLSFLYV 276
G + GG E +VGSPFIKGP+++ V +TPHG +E+ +SDG L+R+SE+V+FFTLP YP I VTV VTNDGR+FS L F+Y+
Sbjct: 336 GSVCGGGEYHIVGSPFIKGPALKCVISTPHGKMEMKYSDGTLERYSETVLFFTLPSYPHPDVVTMTEGKIDVTVEVTNDGRHFSAPLPFVYL 427
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: F1A0T9_DICPU (IPT/TIG domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A0T9_DICPU) HSP 1 Score: 88.6 bits (218), Expect = 1.850e-19 Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYPRSLGTPYP-ANDITVTVTVTNDGRNFSNKLSFLYV 276
G GG +M VVGSPFI+ S++ +F TPHG+V + ++ +SESV+FFTLPPYP G P ++ V V +TNDGRNFSN LSF Y+
Sbjct: 152 GTTLGGDQMHVVGSPFIRCNSLKCIFHTPHGDVAASN----IELYSESVLFFTLPPYPIPPGFNSPEGTELPVQVVITNDGRNFSNPLSFTYI 240
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: Q75JY0_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q75JY0_DICDI) HSP 1 Score: 90.1 bits (222), Expect = 4.650e-19 Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYPRSLGTPYP-ANDITVTVTVTNDGRNFSNKLSFLYV 276
G GG +M VVGSPFI+ S++ +F TPHG+V + ++ FSESV+FFTLPPYP G P ++ V V +TNDGRNFSN LSF Y+
Sbjct: 734 GTTLGGDQMHVVGSPFIRCNSLKCIFHTPHGDVPASN----IELFSESVLFFTLPPYPIPQGFNSPEGTELPVQVVITNDGRNFSNPLSFTYI 822
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: L8H608_ACACA (IPT/TIG domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H608_ACACA) HSP 1 Score: 86.3 bits (212), Expect = 1.020e-17 Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYP-RSLGTPY---PANDITVTVTVTNDGRNFSNKLSFLYV 276
G + GG +M V+G PFIKGPS+ ++F TPHG+V + + +S+SV+FF PPYP ++ +PY P ++ V V VTNDGR SN L F Y+
Sbjct: 495 GSVHGGDKMHVIGQPFIKGPSLSIIFATPHGDVTALNPE----MYSDSVLFFEAPPYPCPAIFSPYNRDPVREVKVMVQVTNDGRTMSNPLEFTYI 586
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: F4Q9J0_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q9J0_CAVFA) HSP 1 Score: 86.3 bits (212), Expect = 1.030e-17 Identity = 45/93 (48.39%), Postives = 60/93 (64.52%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYPRSLG-TPYPANDITVTVTVTNDGRNFSNKLSFLYV 276
G GG +M VVGSPFI+ S+R +F TPHG++ + ++ FSESV+FFTLPPYP P ++ V V +TNDGRN+SN L F Y+
Sbjct: 553 GSTQGGDQMHVVGSPFIRCNSLRCIFHTPHGDIPANN----IELFSESVLFFTLPPYPAPANFCPPDGTELPVQVVITNDGRNYSNPLPFTYI 641
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: A0A151ZHG7_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZHG7_9MYCE) HSP 1 Score: 85.9 bits (211), Expect = 1.400e-17 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYPRSLGTPYP-ANDITVTVTVTNDGRNFSNKLSFLYV 276
G GG +M VVGSPFI+ S+R +F TPHG++ + ++ +SESV+FFTLPPYP P ++ V V +TNDGRN+SN L+F Y+
Sbjct: 511 GTSLGGDQMHVVGSPFIRCNSLRCIFHTPHGDIPATN----IELYSESVLFFTLPPYPTPPNFSAPEGTELPVQVVITNDGRNYSNPLAFTYI 599
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: UPI0006449DA0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449DA0) HSP 1 Score: 85.5 bits (210), Expect = 1.840e-17 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYPRSLG-TPYPANDITVTVTVTNDGRNFSNKLSFLYV 276
G GG +M VVGSPFI+ S+R +F TPHG++ + ++ +SESV+FFTLPPYP +P ++ V V +TNDGRN+SN L F Y+
Sbjct: 421 GSTIGGEQMHVVGSPFIRCNSLRCIFHTPHGDIPANN----IELYSESVLFFTLPPYPSPPNFSPPDGTELPVQVVITNDGRNYSNPLPFTYI 509
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: A0A8J4Q3E4_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q3E4_9MYCE) HSP 1 Score: 82.0 bits (201), Expect = 3.180e-16 Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYPRSLGTPYP-ANDITVTVTVTNDGRNFSNKLSFLYV 276
G GG +M VVGSPFI+ S++ + TP G+V + ++ +SESV+FFTLPPYP P ++ V + VTNDGRN+SN LSF Y+
Sbjct: 601 GTTLGGEQMHVVGSPFIRCSSLKCIIHTPQGDVPASN----IELYSESVLFFTLPPYPIPANFSQPEGTELPVQIVVTNDGRNYSNPLSFTYI 689
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Match: UPI000644D875 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D875) HSP 1 Score: 81.6 bits (200), Expect = 4.200e-16 Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 1 GPMTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFTLPPYPRSLG-TPYPANDITVTVTVTNDGRNFSNKLSFLYV 276
G GG +M VVGSPFI+ S+R +F T HG++ + ++ FSESV+FFTLPPYP P ++ V V TNDGRN+SN L F Y+
Sbjct: 424 GSSLGGDQMHVVGSPFIRCNSLRCIFHTAHGDIPANN----IELFSESVLFFTLPPYPAPPNFCPPDGTELAVQVVTTNDGRNYSNPLPFTYI 512 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112743.2648.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112743.2648.1 >prot_M-pyrifera_M_contig112743.2648.1 ID=prot_M-pyrifera_M_contig112743.2648.1|Name=mRNA_M-pyrifera_M_contig112743.2648.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp MTGGVEMCVVGSPFIKGPSMRVVFTTPHGNVELCHSDGALDRFSESVMFFback to top mRNA from alignment at M-pyrifera_M_contig112743:15..290+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112743.2648.1 ID=mRNA_M-pyrifera_M_contig112743.2648.1|Name=mRNA_M-pyrifera_M_contig112743.2648.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=276bp|location=Sequence derived from alignment at M-pyrifera_M_contig112743:15..290+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112743:15..290+ >mRNA_M-pyrifera_M_contig112743.2648.1 ID=mRNA_M-pyrifera_M_contig112743.2648.1|Name=mRNA_M-pyrifera_M_contig112743.2648.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig112743:15..290+ (Macrocystis pyrifera P11B4 male)back to top |