mRNA_M-pyrifera_M_contig112440.2603.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: A0A7V8VAP8_9BACT (DiS_P_DiS domain-containing protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8VAP8_9BACT) HSP 1 Score: 240 bits (613), Expect = 1.190e-77 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
Query: 1 ALGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELVLFQPHPMVAAGFLLFSVCPGAPYGPPFTAIAKVDTLVSVGLMVV 348
ALGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELVLFQPHPMVAAGFLLFSVCPGAPYGPPFTAIAKVDTLVSVGLMVV
Sbjct: 176 ALGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELVLFQPHPMVAAGFLLFSVCPGAPYGPPFTAIAKVDTLVSVGLMVV 291
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: A0A2S8G2F4_9BACT (DiS_P_DiS domain-containing protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8G2F4_9BACT) HSP 1 Score: 129 bits (324), Expect = 2.230e-33 Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 ALGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELV 216
+LGATIGSFLNVVAYRLPR ES+VF+RS CPQC TQI GRDNVPIFGW+MLGGRCR CQ+ IS RYPIVEL+
Sbjct: 22 SLGATIGSFLNVVAYRLPRRESIVFKRSRCPQCGTQIKGRDNVPIFGWLMLGGRCRACQTPISPRYPIVELI 93
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: A0A5C6BKJ5_9PLAN (Leader peptidase PppA n=2 Tax=Symmachiella macrocystis TaxID=2527985 RepID=A0A5C6BKJ5_9PLAN) HSP 1 Score: 114 bits (286), Expect = 4.060e-27 Identity = 53/70 (75.71%), Postives = 58/70 (82.86%), Query Frame = 1
Query: 7 GATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELV 216
GATIGSFLNVVAYRLPR ESVVF+ SHCP+C +I RDNVPI GW+ LGGRCR CQS IS RYPIVE +
Sbjct: 209 GATIGSFLNVVAYRLPRRESVVFKSSHCPKCGVKIESRDNVPIIGWLRLGGRCRACQSLISMRYPIVESI 278
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: A0A3B8ZH72_9PLAN (DiS_P_DiS domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8ZH72_9PLAN) HSP 1 Score: 112 bits (279), Expect = 6.020e-27 Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 1
Query: 4 LGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELVLFQPHPMVAAG--FLLFSV 267
LG TIGSFLNVVAYR+PRGESV+F+ S CP+C ++ILG+DN+PI GW+ L GRCR C + IS+RYPIVE +AAG FL F V
Sbjct: 12 LGGTIGSFLNVVAYRMPRGESVIFRPSRCPKCESRILGQDNIPIVGWLRLKGRCRVCHAPISSRYPIVE--------SIAAGIFFLFFLV 93
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: A0A5B9Q8T3_9BACT (Leader peptidase PppA n=1 Tax=Bythopirellula goksoeyrii TaxID=1400387 RepID=A0A5B9Q8T3_9BACT) HSP 1 Score: 107 bits (266), Expect = 1.300e-26 Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 4 LGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELVL 219
+GA IGSFLNVVAYRLPRG SVV+Q SHCP+C+ I RDN+PI GW+ LGG+CR+C++ IS RY +VE V+
Sbjct: 18 IGACIGSFLNVVAYRLPRGMSVVWQPSHCPKCNHPIRARDNIPILGWLWLGGKCRDCKATISPRYAVVEGVM 89
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: A0A6P0R2K7_9CYAN (Prepilin leader peptidase/N-methyltransferase n=2 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6P0R2K7_9CYAN) HSP 1 Score: 108 bits (269), Expect = 3.630e-26 Identity = 45/72 (62.50%), Postives = 60/72 (83.33%), Query Frame = 1
Query: 1 ALGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELV 216
ALGA+IGSFLNVV YR+P G S+++ SHCP+CH+++ +NVPIFGW+ LGGRC +C+S IS RYP+VEL+
Sbjct: 7 ALGASIGSFLNVVIYRIPAGLSILWPPSHCPKCHSRLKATENVPIFGWLWLGGRCGHCRSPISIRYPVVELI 78
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: UPI001A0C4E5F (Prepilin peptidase n=1 Tax=Leptolyngbyaceae cyanobacterium M65_K2018_010 TaxID=2747810 RepID=UPI001A0C4E5F) HSP 1 Score: 108 bits (269), Expect = 4.200e-26 Identity = 45/69 (65.22%), Postives = 58/69 (84.06%), Query Frame = 1
Query: 4 LGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVE 210
LGA +GSFLNVV YRLP+G S+++ SHCPQCHT++ DNVPI GW+ LGGRCR+C++ ISARYP++E
Sbjct: 13 LGAALGSFLNVVIYRLPQGLSLLYPPSHCPQCHTRLKPYDNVPILGWLWLGGRCRHCKAPISARYPLIE 81
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: A0A1F4U6M1_9BACT (Prepilin leader peptidase/N-methyltransferase n=1 Tax=candidate division WOR-1 bacterium RIFOXYC2_FULL_46_14 TaxID=1802587 RepID=A0A1F4U6M1_9BACT) HSP 1 Score: 107 bits (267), Expect = 4.480e-26 Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 1 ALGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELV 216
ALGA +GSFLNV YRLPR ESV+F SHCP+C IL DN+P+ W++LGG+CR C+ KISARYP+VEL+
Sbjct: 9 ALGAMLGSFLNVCIYRLPREESVIFPASHCPKCGRNILPLDNIPVLSWLILGGKCRFCKEKISARYPLVELI 80
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: UPI00047CD3D6 (A24 family peptidase n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI00047CD3D6) HSP 1 Score: 108 bits (270), Expect = 6.410e-26 Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 1 ALGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELV 216
ALGA++GSF+NVV YRLP G S++F SHCP C Q+ DNVP+FGW+ L GRCR CQSKIS RYP++E+V
Sbjct: 15 ALGASVGSFINVVVYRLPAGLSIIFPPSHCPHCSNQLKPYDNVPVFGWLWLRGRCRYCQSKISLRYPMIEVV 86
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Match: A0A517SKB8_9PLAN (Leader peptidase PppA n=2 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SKB8_9PLAN) HSP 1 Score: 111 bits (277), Expect = 6.570e-26 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 4 LGATIGSFLNVVAYRLPRGESVVFQRSHCPQCHTQILGRDNVPIFGWVMLGGRCRNCQSKISARYPIVELV 216
LGATIGSFLNVVAYR+PRGESVV + S CP+C T I RDN+P+ GW++L GRCR CQ ISA+YPIVE +
Sbjct: 164 LGATIGSFLNVVAYRMPRGESVVLRSSRCPRCTTAIQPRDNIPVLGWLLLNGRCRACQVPISAQYPIVEFI 234 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112440.2603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112440.2603.1 >prot_M-pyrifera_M_contig112440.2603.1 ID=prot_M-pyrifera_M_contig112440.2603.1|Name=mRNA_M-pyrifera_M_contig112440.2603.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp MLGGRCRNCQSKISARYPIVELVLFQPHPMVAAGFLLFSVCPGAPYGPPFback to top mRNA from alignment at M-pyrifera_M_contig112440:2..418+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112440.2603.1 ID=mRNA_M-pyrifera_M_contig112440.2603.1|Name=mRNA_M-pyrifera_M_contig112440.2603.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig112440:2..418+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112440:2..418+ >mRNA_M-pyrifera_M_contig112440.2603.1 ID=mRNA_M-pyrifera_M_contig112440.2603.1|Name=mRNA_M-pyrifera_M_contig112440.2603.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig112440:2..418+ (Macrocystis pyrifera P11B4 male)back to top |