mRNA_M-pyrifera_M_contig112417.2594.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: A0A024UJE0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJE0_9STRA) HSP 1 Score: 112 bits (279), Expect = 5.200e-26 Identity = 60/138 (43.48%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFR---RRSKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHREXXXXXXXXXXXXXXXHLLTSISGDG 405
L T SW++TGS LAVS+GRFDH GWCN R A+CLWN+F SK + + SSG M V HP +PA+VAAG+F G+++VWNTS ++P++ T+ + +Y HRE + + S+SGDG
Sbjct: 138 LECTGVSWNATGSVLAVSYGRFDHSGWCNYR-SALCLWNIFSADFNPSKPNVVLETSSG------LMCVAHHPTNPAVVAAGSFNGELMVWNTS-LEEPLVATSGIGDYFHREPISKLAWVFDTPSREYHIASVSGDG 267
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: A0A6G0WJB3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJB3_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.090e-25 Identity = 59/138 (42.75%), Postives = 82/138 (59.42%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFR---RRSKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHREXXXXXXXXXXXXXXXHLLTSISGDG 405
L T SW++TGS LAVS+GRFDH GWCN R A+CLWN+F SK S + SSG M V HP +PA+VAAG+F G+++VWNT+ ++ ++ T+ + +Y HRE + + S+SGDG
Sbjct: 58 LQCTGVSWNATGSVLAVSYGRFDHSGWCNYR-SALCLWNIFSSDFNASKPSMVLETSSG------LMCVAHHPTNPAMVAAGSFNGELLVWNTA-LEESLVATSGIGDYFHREPITKLAWVYDAQSREYHIASVSGDG 187
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: A0A1W0AAK0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAK0_9STRA) HSP 1 Score: 109 bits (272), Expect = 3.330e-25 Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFRRR---SKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHREXXXXXXXXXXXXXXXHLLTSISGDG 405
L T SW++TGS +AVS+GRFDH GWCN R A+CLWN+F SK + + SSG M V HP PA+VAAGTF G+V+VWNTS ++ ++ ++ + +Y HRE + + S+SGDG
Sbjct: 138 LQCTGVSWNATGSVIAVSYGRFDHTGWCNYR-SALCLWNIFHHDFNPSKPNLVLETSSG------LMCVAHHPTMPAVVAAGTFNGEVIVWNTS-LEENLVASSGIGDYFHREPISKLSWVYDATSRDYNIASVSGDG 267
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: A0A835ZBI6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI6_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.210e-25 Identity = 63/139 (45.32%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFRRRSKASSHADGSSGG--GASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHREXXXXXXXXXXXXXXX--HLLTSISGDG 405
L T SW+STGSTLA S+GR + GWCN GA+ WN F+R S A A + SS M +C HP HPAIVAAG+F G+V+VWNT+ DDP++G +Q+ +Y HRE + L S SGDG
Sbjct: 61 LQCTGVSWNSTGSTLAASYGRLNVAGWCN-EPGALACWNAFKRSSSADEAATLTPDVVFDHSSYLMCLCCHPTHPAIVAAGSFNGEVLVWNTA-ADDPLLGVSQIDDYFHREPVTQVAWVYDMDEQGEGYRLVSTSGDG 197
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: W4FF73_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF73_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.210e-24 Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFR---RRSKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHREXXXXXXXXXXXXXXXHLLTSISGDG 405
L T SW++TGS LAV++GRFDH GWCN R +CLWN+F +K + + SSG M V HP +PA+VAAG+F G+++VWNTS ++P++ T+ + +Y HRE + + S+SGDG
Sbjct: 140 LECTGVSWNATGSVLAVAYGRFDHSGWCNYR-SVLCLWNLFSADFNANKPTLVLETSSG------LMCVAHHPTNPAMVAAGSFNGELMVWNTS-LEEPLVATSGIGDYFHREPITKLAWVYDTPSREYHIASVSGDG 269
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: A0A7S2UTZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTZ9_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.670e-24 Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFRRRSKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHREXXXXXXXXXXXXXXXHLLTSISGDG 405
L T WS+TGS L SFGR D GWC+ G +C WN+F+RR + + SSC M V HP PAI+AAG+F G+V+VW+T+ ++P+I +T++ +Y HRE + ++S+SG+G
Sbjct: 20 LQCTGVGWSATGSVLVASFGRHDLCGWCDIP-GVLCAWNIFQRRGFDPAKPEFVYEH--SSCLMCVACHPTKPAIIAAGSFNGEVLVWDTA-AEEPLIASTKIDDYFHREPIVKVAWVYDLREEEYQVSSVSGEG 150
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: A0A067CJD9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJD9_SAPPC) HSP 1 Score: 106 bits (264), Expect = 4.250e-24 Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFR---RRSKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHREXXXXXXXXXXXXXXXHLLTSISGDG 405
L T+ SW++TGS LAV++GRFDH GWCN R A+CLWN+F +K S + SSG M V HP PA++AAG+F G+V+VWNTS ++ ++ ++ + +Y HRE + + S+SGDG
Sbjct: 139 LQCTAVSWNATGSVLAVAYGRFDHSGWCNYR-SALCLWNIFHPDFNVAKPSLVLETSSG------LMCVAHHPTMPAVIAAGSFNGEVLVWNTS-LEETLVASSGIGDYFHREPIAKVSWVYDPVARDYNIASVSGDG 268
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: A0A6A4ZKX5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZKX5_9STRA) HSP 1 Score: 101 bits (252), Expect = 7.660e-24 Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFR---RRSKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHRE 330
L T SW++TGS LAV++GRFDH GWCN R +CLWN+F +K + + SSG M V HP +PA+VAAG+F G+++VWNTS ++P++ T+ + +Y HRE
Sbjct: 140 LECTGVSWNATGSVLAVAYGRFDHSGWCNYR-SVLCLWNLFSADFNANKPTLVLETSSG------LMCVAHHPTNPAVVAAGSFNGELMVWNTS-LEEPLVATSGIGDYFHRE 244
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: A0A2P4YCZ2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCZ2_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.010e-23 Identity = 57/138 (41.30%), Postives = 79/138 (57.25%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFR---RRSKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHREXXXXXXXXXXXXXXXHLLTSISGDG 405
L T SW++TGS +AV++GRFDH GWCN R A+CLWNVF+ K S + SSG M V FHP++P+IVAAG+F G+V VW+ D + ++ + +Y HRE + + S+SGDG
Sbjct: 148 LSCTGVSWNATGSIIAVAYGRFDHSGWCNYR-SALCLWNVFQSDLNSQKPSLVLETSSG------LMCVAFHPQNPSIVAAGSFNGEVFVWDLEPVDYKFL-SSGIGDYFHREPVTKVAWVYDIQTADYNIASVSGDG 277
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Match: UPI000A2A941C (LOW QUALITY PROTEIN: WD repeat-containing protein 34-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A941C) HSP 1 Score: 103 bits (257), Expect = 2.340e-23 Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 1
Query: 1 LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFRRR---SKASSHADGSSGGGASSCTMSVCFHPEHPAIVAAGTFGGQVVVWNTSKTDDPVIGTTQVSEYGHRE 330
L T SW+STGS +A S+GRFDH WC + ++C WN+ R+ +K S D SSC MS+ FHP+ PA++A GTF G+V VW+ SK DD +IGT+ + HRE
Sbjct: 122 LQVTGLSWNSTGSVIAASYGRFDHEDWCT-HKSSLCTWNIDRKTLKTNKPDSTID------LSSCLMSIAFHPKLPAVIAGGTFNGEVQVWDLSKEDDLLIGTSGLGNESHRE 227 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112417.2594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112417.2594.1 >prot_M-pyrifera_M_contig112417.2594.1 ID=prot_M-pyrifera_M_contig112417.2594.1|Name=mRNA_M-pyrifera_M_contig112417.2594.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp LPATSSSWSSTGSTLAVSFGRFDHIGWCNCRRGAVCLWNVFRRRSKASSHback to top mRNA from alignment at M-pyrifera_M_contig112417:2..557- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112417.2594.1 ID=mRNA_M-pyrifera_M_contig112417.2594.1|Name=mRNA_M-pyrifera_M_contig112417.2594.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=556bp|location=Sequence derived from alignment at M-pyrifera_M_contig112417:2..557- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112417:2..557- >mRNA_M-pyrifera_M_contig112417.2594.1 ID=mRNA_M-pyrifera_M_contig112417.2594.1|Name=mRNA_M-pyrifera_M_contig112417.2594.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig112417:2..557- (Macrocystis pyrifera P11B4 male)back to top |