mRNA_M-pyrifera_M_contig112311.2581.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A1J5GSI2_9BACT (Uncharacterized protein n=4 Tax=unclassified Atribacterota TaxID=1047049 RepID=A0A1J5GSI2_9BACT) HSP 1 Score: 65.5 bits (158), Expect = 3.560e-9 Identity = 44/158 (27.85%), Postives = 77/158 (48.73%), Query Frame = 1
Query: 7 PRVALSTTEIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVRLYTNDPDQPERDITVRAEIVP----EYVIEPAELDLGTLKAGESAAQTFTVRQNGDQALQIECVEASEGLSVSLE 468
P+++ S E D G++K + I ++N G E L +S+++A C C SS + PG +A + Y VK + + +NDP P + IT+ AE+ P + + ++ DLG + G+ FT+ G+ L I ++ SE + +E
Sbjct: 35 PKISFSEEEWDFGKIKEDERPVHIFTIKNIGREELIISRVRASCGCTATMLSSDHILPGKSAELKATFNPTGY-KGLVKKDINIESNDPQIPNKKITIIAEVEPTPSPQAFLSNSQWDLGLISQGDLPTFAFTIENKGELDLVINKIDISEYVQYDVE 191
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A7X9IMY3_9BACT (DUF1573 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X9IMY3_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 1.320e-7 Identity = 44/149 (29.53%), Postives = 68/149 (45.64%), Query Frame = 1
Query: 7 PRVALSTTEIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVRLY----TNDPDQPERDITVRAEI----VPEYVIEPAELDLGTLKAGESAAQTFTVRQNGDQALQIE 429
PRV E D G++K + + +N GT LKVS++ C C S + PG + ++ S G+V Y +NDP QP+ ++T++AE+ + ++ LDLG GE A+ VR G L+IE
Sbjct: 32 PRVVFKELERDFGRIKQGETVSYEFIFKNEGTAPLKVSRVATSCGCAAALVSQKEIAPGKEGRLKV-----SFDSRGYSGQVVKYIYFDSNDPKQPQVELTIKAEVETGPAAKLELDRYNLDLGISLEGEEASAKLLVRNTGQLELRIE 175
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A350D5X9_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A350D5X9_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 1.420e-7 Identity = 44/149 (29.53%), Postives = 68/149 (45.64%), Query Frame = 1
Query: 7 PRVALSTTEIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVRLY----TNDPDQPERDITVRAEI----VPEYVIEPAELDLGTLKAGESAAQTFTVRQNGDQALQIE 429
PRV E D G++K + + +N GT LKVS++ C C S + PG + ++ S G+V Y +NDP QP+ ++T++AE+ + ++ LDLG GE A+ VR G L+IE
Sbjct: 110 PRVVFKELERDFGRIKQGETVSYEFIFKNEGTAPLKVSRVATSCGCAAALVSQKEIAPGKEGRLKV-----SFDSRGYSGQVVKYIYFDSNDPKQPQVELTIKAEVETGPAAKLELDRYNLDLGITLEGEEASAKLLVRNTGQLELRIE 253
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A3N0ZMT4_9BACT (DUF1573 domain-containing protein n=1 Tax=Bacteroidetes/Chlorobi group bacterium MS-B_bin-24 TaxID=2382228 RepID=A0A3N0ZMT4_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 1.300e-6 Identity = 39/153 (25.49%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 37 DLGQVKPV-DGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVRLYTNDPDQPERDITVRAEIVPEYVIEPAE-LDLGTLKAGESAAQTFTVRQNGDQALQIECVEAS-EGLSVSLEALRPKK 486
D G VKP D + ++++N G E LK++++K C C + PG A+ ++ + ++ + N VK +R+ +NDP P + + ++A I I P + G+ + T++ N + + + ++ + + LSV+L PKK
Sbjct: 33 DWGTVKPTQDPLNTKIKLKNVGNEVLKITEVKPGCGCTTAPLDKNELNPGEEATLSVTLRIAGFSGNVVKS-IRIASNDPQNPNKYLYLKANIFHPISISPTSYFAFNEMTVGKESTAKVTIKNNTQEPITLSDIQVTPDNLSVNL----PKK 180
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A3N7GSV8_9FLAO (DUF1573 domain-containing protein n=1 Tax=Chryseobacterium sp. TaxID=1871047 RepID=A0A3N7GSV8_9FLAO) HSP 1 Score: 55.1 bits (131), Expect = 2.950e-6 Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 13 VALSTTEIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVRLYTNDPD 276
+A T ID G+V P +RI+ V+NTGT+ L +S IKA C C S+ +KPG +A I+V T D + + +++NDP+
Sbjct: 22 IAFDRTVIDYGKVMPGSDGQRILTVKNTGTQPLIISDIKASCGCTTPQWSTDPIKPGGSAQ--IKVGYDTNIRGDFRKLIEVFSNDPE 107
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A1W9LDK0_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium A1 TaxID=1934251 RepID=A0A1W9LDK0_9BACT) HSP 1 Score: 56.2 bits (134), Expect = 5.480e-6 Identity = 47/194 (24.23%), Postives = 81/194 (41.75%), Query Frame = 1
Query: 7 PRVALSTTEIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVRLYTNDPDQPERDITVRAEIVPEYVIEPAELDLGTLKAGESAAQTFTVRQNGDQALQIECVEASEG-LSVSLEALRPKKEEGQEQPKRYAVVVTLEPGAPMGVFRGKVAVST 585
P++ + G++ +E ++N GT TL++ Q++A C C +TS V PG T + ++ L K + + +NDP QP + + + E I P +L G + +G + A+ I EA+ L+V+ E K + + VT +P G RG V + T
Sbjct: 30 PKLVCDEPTFNFGEMDNSKDVEHTFLLKNEGTLTLEIGQVRASCGCTVASTSQKTVPPGQTTEVSARLSLRGRQGPQHK-TITVQSNDPQQPNFMLALEGSAISEMQIRPNQLFFGRIASGTIVTGLVELAIESTNAVNILKSEANTPQLAVTTEI--------SADGKLHRIWVTTQPPLSKGTLRGNVHIET 214
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A316MTA5_9BACT (Uncharacterized protein n=2 Tax=Bacteroidales TaxID=171549 RepID=A0A316MTA5_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 1.050e-5 Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 7 PRVALSTTEIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVRLYTNDPDQPERDITVRAEIV 315
P+VALSTT IDLGQ E V V N G + L + +I + VE + + VK G+ A ++V S+ + ++ L TNDPD+P +I V E++
Sbjct: 255 PKVALSTTAIDLGQTAVGTRNEAEVIVENFGKDPLIIRRISSFDPAVEASINKTEVKGGSQAKIKVKVDTRKCESDILNARISLITNDPDRPVSNIRVVGELL 357
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A2S8GEH1_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GEH1_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 1.500e-5 Identity = 48/175 (27.43%), Postives = 77/175 (44.00%), Query Frame = 1
Query: 85 VRNTGTETLKVSQIKALCTCVEVATSS---LVVKPGATASFAIQVMLSTYPSNDVKGKVRLYTNDPDQPERDITVRAEIVPEYVIEPAELDLGTLKAGESAAQTFTVRQNGDQALQIECV----EASEGLSVSLEALRPKK-EEGQEQPKRYAVVVTLEPGAPMGVFRGKVAVST 585
V+N G E L+++ C C L V PG T ++ Y D + TNDP +P ++ + +V V+EP+E+ L + AGE+ V D +I + + SE SVS L P++ +E Y V + ++PG P+G R + V+T
Sbjct: 79 VKNDGKEELELTMEGTTCKCTMADLKEGDVLRVAPGETTEIKLEWRPKAY-QEDFAQTATIATNDPRKPTLELRITGSVVQAVVLEPSEIRLTNMAAGETRKAATKVLSFKDPDFKINDLKVTGDGSELFSVSSRPLEPEELKETSGALAGYLVQLEVKPGLPLGTNRNNIEVAT 252
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A4Y9IYS1_9BACT (DUF1573 domain-containing protein n=1 Tax=Barnesiella sp. WM24 TaxID=2558278 RepID=A0A4Y9IYS1_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 2.620e-5 Identity = 32/103 (31.07%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 7 PRVALSTTEIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVRLYTNDPDQPERDITVRAEIV 315
P++ALS+T IDLGQV E + + N G + L + ++ +L V+ + + VK G+ A ++V + V ++ + TNDPD+P +I V E++
Sbjct: 256 PKIALSSTSIDLGQVAVGTRNEEEIIIENFGKDPLVIRKVASLDPAVQASVNKTEVKGGSNARIKVKVDTRKVEGDIVNARITVITNDPDRPVSNIRVVGELL 358
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Match: A0A367ZIG6_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A367ZIG6_9BACT) HSP 1 Score: 53.5 bits (127), Expect = 2.770e-5 Identity = 40/150 (26.67%), Postives = 71/150 (47.33%), Query Frame = 1
Query: 31 EIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEVATSSLVVKPGATASFAIQVMLSTYPSNDVKGKVR----LYTNDPDQPERDITVRAEIVPEYVIEPAELDLGTLKAGESAAQTFTVRQNGDQALQIECVEAS-EGLSVSL 465
+ D G + +E+IV ++N+G +TL +S ++A C C S V+ P TA+ I + S GKV + +ND P+ I+ A IV +P + LK A+ +V+ N + ++I+ ++ GL+V +
Sbjct: 30 DFDFGDIFAGSKVEKIVTIKNSGKDTLIISNVRASCGCTATLLSDKVLPPKKTATLNIG-----FDSRGFNGKVHKTVTISSNDNANPDLQISFTANIVSLLTFDPPYIYFQQLKPDSVASLRISVKNNTQETIEIKSIQNKITGLTVDI 174 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112311.2581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112311.2581.1 >prot_M-pyrifera_M_contig112311.2581.1 ID=prot_M-pyrifera_M_contig112311.2581.1|Name=mRNA_M-pyrifera_M_contig112311.2581.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp EGPRVALSTTEIDLGQVKPVDGIERIVEVRNTGTETLKVSQIKALCTCVEback to top mRNA from alignment at M-pyrifera_M_contig112311:2..586+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112311.2581.1 ID=mRNA_M-pyrifera_M_contig112311.2581.1|Name=mRNA_M-pyrifera_M_contig112311.2581.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig112311:2..586+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112311:2..586+ >mRNA_M-pyrifera_M_contig112311.2581.1 ID=mRNA_M-pyrifera_M_contig112311.2581.1|Name=mRNA_M-pyrifera_M_contig112311.2581.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig112311:2..586+ (Macrocystis pyrifera P11B4 male)back to top |