mRNA_M-pyrifera_M_contig112293.2574.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A523K4N5_9GAMM (ABC-F family ATPase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523K4N5_9GAMM) HSP 1 Score: 339 bits (869), Expect = 3.360e-112 Identity = 166/194 (85.57%), Postives = 182/194 (93.81%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
Y VLDTVIMGHE+LW + QER+RLY L E++D EG+RVADLE EFAE+DGY+AESRAGELLEGIGI+V+QH+GPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDI T+RWLED+L S+STMVIISHDRHFLNSVCTHMADLDYGKL VFPGNYDEYMTAATQARERMY +NAKKKAKMA+LQAFVSRF
Sbjct: 79 YRVLDTVIMGHEKLWQVMQERERLYSLPELSDAEGMRVADLEVEFAEMDGYSAESRAGELLEGIGISVEQHDGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDINTIRWLEDFLNESKSTMVIISHDRHFLNSVCTHMADLDYGKLHVFPGNYDEYMTAATQARERMYTNNAKKKAKMAELQAFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A7Y1TBC1_9GAMM (ABC-F family ATPase n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y1TBC1_9GAMM) HSP 1 Score: 330 bits (846), Expect = 9.890e-109 Identity = 162/194 (83.51%), Postives = 181/194 (93.30%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
+ VLD VIMG+E+LW + QER+RLY L EM+DEEGIRVADLE EFAE+DGY+AESRAGELLE IGI V+QH GPMSA+APGWKLRVLLAQALFSDPDILLLDEPTNNLDI T+RWLE++L S+STMVIISHDRHFLNSVC+H+ADLDYGKL+VFPGNYDEYMTAATQARER++ADNAKKKAKMADLQAFVSRF
Sbjct: 79 HRVLDVVIMGYERLWEVMQERNRLYSLPEMSDEEGIRVADLEIEFAEMDGYSAESRAGELLEAIGIPVEQHEGPMSAVAPGWKLRVLLAQALFSDPDILLLDEPTNNLDINTIRWLEEFLDKSKSTMVIISHDRHFLNSVCSHIADLDYGKLNVFPGNYDEYMTAATQARERVHADNAKKKAKMADLQAFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A661BNX9_9GAMM (ABC-F family ATPase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BNX9_9GAMM) HSP 1 Score: 330 bits (845), Expect = 1.400e-108 Identity = 164/192 (85.42%), Postives = 179/192 (93.23%), Query Frame = 1
Query: 7 VLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
V+D VIMG E+LW L QERDRLY L EM+DEEG+ VADLE EFAE+DGY+AESRAGELLEGIGI+V+QH+GPMSA+APG K RVLLAQALFSDPDILLLDEPTNNLDI TVRWLE++LV S+STMVIISHDRHFLNSVCTHMADLDYGKL +FPGNYDEYMTAATQARERMY+DNAKKKAKMADLQAFVSRF
Sbjct: 81 VVDAVIMGPERLWQLVQERDRLYSLPEMSDEEGMLVADLEVEFAEMDGYSAESRAGELLEGIGISVEQHDGPMSAVAPGLKFRVLLAQALFSDPDILLLDEPTNNLDINTVRWLENFLVESKSTMVIISHDRHFLNSVCTHMADLDYGKLQLFPGNYDEYMTAATQARERMYSDNAKKKAKMADLQAFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A2D6IW71_9GAMM (ABC-F family ATPase n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2D6IW71_9GAMM) HSP 1 Score: 327 bits (839), Expect = 1.160e-107 Identity = 162/194 (83.51%), Postives = 176/194 (90.72%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
Y V+DTVIMGHE++W L QER+RLY L EM+DEEG+ VADLE EFAELDGY+AESRA ELLEGIGI V QH GPMSA+APGWKLRVLLAQALFSDPDILLLDEPTNNLDI T+RWLED+L S+STMVIISHDRHFLNSVCTHMADLDYG+L VFPGNYDEYMTAATQA+ER ADNAKKK KMA+LQAFVSRF
Sbjct: 79 YRVVDTVIMGHERMWQLIQERERLYSLPEMSDEEGMLVADLEVEFAELDGYSAESRASELLEGIGIPVGQHEGPMSAVAPGWKLRVLLAQALFSDPDILLLDEPTNNLDINTIRWLEDFLNESKSTMVIISHDRHFLNSVCTHMADLDYGELRVFPGNYDEYMTAATQAQERKQADNAKKKVKMAELQAFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A193LLN3_9GAMM (ABC-F family ATPase n=1 Tax=Woeseia oceani TaxID=1548547 RepID=A0A193LLN3_9GAMM) HSP 1 Score: 324 bits (831), Expect = 1.800e-106 Identity = 156/194 (80.41%), Postives = 176/194 (90.72%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
+ VLDTVIMGHE+LW + QERDRLY E++DE+G+RVADLE EFAE+DGY+AESRAGELL+ IGI ++QH GPMS +APGWKLRVLLAQALFSDPD+LLLDEPTNNLDI T+RWLE+ L S++TMVIISHDRHFLNSVCTHMADLDYGKL +FPGNYDEYMTAA QARER+ ADNAKKKAKMADLQAFVSRF
Sbjct: 79 FRVLDTVIMGHERLWEISQERDRLYSQAELSDEDGMRVADLEVEFAEMDGYSAESRAGELLQSIGIPIEQHEGPMSEVAPGWKLRVLLAQALFSDPDVLLLDEPTNNLDINTIRWLEECLNASKATMVIISHDRHFLNSVCTHMADLDYGKLQLFPGNYDEYMTAAEQARERVQADNAKKKAKMADLQAFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A661GD77_9GAMM (ABC-F family ATPase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GD77_9GAMM) HSP 1 Score: 324 bits (830), Expect = 2.550e-106 Identity = 156/194 (80.41%), Postives = 179/194 (92.27%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
+ VLD VI+G+++LW + QER+RLY L EM+DEEG++VADLE EFAE+DGY+AE+RAGELLEGIGI V+QH GPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDI +RWLE++L G +STMVIISHDRHFLNSVC+HMADLDYGKL VFPGNYDEYMTAATQARER+++DNAKKK KMA+LQAFVSRF
Sbjct: 79 FRVLDAVILGYDKLWKVMQERNRLYSLPEMSDEEGMQVADLEVEFAEMDGYSAEARAGELLEGIGIPVEQHEGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDINAIRWLEEFLDGRKSTMVIISHDRHFLNSVCSHMADLDYGKLQVFPGNYDEYMTAATQARERVHSDNAKKKVKMAELQAFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A2N2AE56_9GAMM (ABC-F family ATPase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2N2AE56_9GAMM) HSP 1 Score: 322 bits (824), Expect = 1.730e-105 Identity = 154/194 (79.38%), Postives = 175/194 (90.21%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
YSVLDTVIMGH +LW +K ERDR+Y L EMT+++G++VADLE +FAE DGYTAE+RAGELL G+GI V+QH+GPMSA+APGWKLRVLLAQALFSDPDILLLDEPTNNLDI T+RWLED L STMVIISHDRHFLNSVCTHMADLDYG+L V+PGNYDEYMTAATQ RER+ ADNAKKKA++A+LQ FVSRF
Sbjct: 79 YSVLDTVIMGHAELWQIKHERDRIYALPEMTEDDGMKVADLEVQFAEFDGYTAEARAGELLLGVGIPVEQHSGPMSAVAPGWKLRVLLAQALFSDPDILLLDEPTNNLDINTIRWLEDVLNARNSTMVIISHDRHFLNSVCTHMADLDYGELRVYPGNYDEYMTAATQVRERLLADNAKKKAQIAELQTFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A849GPI2_9GAMM (ABC-F family ATPase n=3 Tax=Woeseia sp. TaxID=1980636 RepID=A0A849GPI2_9GAMM) HSP 1 Score: 322 bits (824), Expect = 2.050e-105 Identity = 153/194 (78.87%), Postives = 177/194 (91.24%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
Y VLDTVIMGHE+LW + QER+RLY +++D++G+RVADLE EFAE+DGY+AESRAGELL+ IGI ++QH GPMSA+APGWKLRVLLAQALFSDPD+LLLDEPTNNLDI T+RWLE++L S++TMVIISHDRHFLNSVCTHMADLDYG L +FPGNYDEYMTAA QARER+ +DNAKKKAKMADLQAFVSRF
Sbjct: 79 YRVLDTVIMGHERLWEVSQERERLYSQPDLSDDDGMRVADLEVEFAEMDGYSAESRAGELLQSIGIPIEQHTGPMSAVAPGWKLRVLLAQALFSDPDVLLLDEPTNNLDINTIRWLEEFLNASKATMVIISHDRHFLNSVCTHMADLDYGALQLFPGNYDEYMTAAEQARERVQSDNAKKKAKMADLQAFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A426QLV3_9GAMM (ABC-F family ATPase n=1 Tax=Thiohalobacter thiocyanaticus TaxID=585455 RepID=A0A426QLV3_9GAMM) HSP 1 Score: 319 bits (818), Expect = 1.690e-104 Identity = 152/194 (78.35%), Postives = 175/194 (90.21%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
Y+VLDTVIMGH +LW ++QER+R+Y L EMT+ +G+RVADLE FAELDGYTAE+RAGELL+G+ I + QH GPMSA+APGWKLRVLLAQALF+DPDI+LLDEPTNNLDI T+RWLED L TMVIISHDRHFLNSVCTHMADLDYG+L ++PGNYDEYMTAATQARER+YADNAKKKA++ADLQAFVSRF
Sbjct: 79 YTVLDTVIMGHAELWQVRQERERIYALAEMTEADGMRVADLEVRFAELDGYTAEARAGELLQGLEIPLAQHTGPMSAVAPGWKLRVLLAQALFADPDIMLLDEPTNNLDINTIRWLEDVLNARNCTMVIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEYMTAATQARERLYADNAKKKAQIADLQAFVSRF 272
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Match: A0A7D9D2J5_9GAMM (Putative transporter fused subunits of ABC superfamily: ATP-binding components n=2 Tax=root TaxID=1 RepID=A0A7D9D2J5_9GAMM) HSP 1 Score: 321 bits (822), Expect = 1.880e-104 Identity = 156/194 (80.41%), Postives = 177/194 (91.24%), Query Frame = 1
Query: 1 YSVLDTVIMGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGELLEGIGITVDQHNGPMSAIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIKTVRWLEDYLVGSQSTMVIISHDRHFLNSVCTHMADLDYGKLSVFPGNYDEYMTAATQARERMYADNAKKKAKMADLQAFVSRF 582
Y VLD VIMG+E+LW + QER+RLY L EM+DE+G+RVA+LE EFAE+DGY+AESRAGELLEGIGI V+QH GPMSAIAPGWKLRVLLAQAL+SDPDILLLDEPTNNLDI +RWLE +L S+STMVIISHDRHFLNSVC+HMADLDYGKL VFPGNYDEYMTAATQARER++ADNAKKK ++A+LQ FVSRF
Sbjct: 134 YRVLDAVIMGYEKLWQVMQERNRLYSLPEMSDEDGMRVAELEIEFAEMDGYSAESRAGELLEGIGIPVEQHKGPMSAIAPGWKLRVLLAQALYSDPDILLLDEPTNNLDINAIRWLEGFLETSKSTMVIISHDRHFLNSVCSHMADLDYGKLHVFPGNYDEYMTAATQARERVHADNAKKKVRIAELQTFVSRF 327 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112293.2574.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112293.2574.1 >prot_M-pyrifera_M_contig112293.2574.1 ID=prot_M-pyrifera_M_contig112293.2574.1|Name=mRNA_M-pyrifera_M_contig112293.2574.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp MGHEQLWLLKQERDRLYGLTEMTDEEGIRVADLEAEFAELDGYTAESRAGback to top mRNA from alignment at M-pyrifera_M_contig112293:3..584+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112293.2574.1 ID=mRNA_M-pyrifera_M_contig112293.2574.1|Name=mRNA_M-pyrifera_M_contig112293.2574.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig112293:3..584+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112293:3..584+ >mRNA_M-pyrifera_M_contig112293.2574.1 ID=mRNA_M-pyrifera_M_contig112293.2574.1|Name=mRNA_M-pyrifera_M_contig112293.2574.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig112293:3..584+ (Macrocystis pyrifera P11B4 male)back to top |