mRNA_M-pyrifera_M_contig112070.2528.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A1G0E5I3_9GAMM (LysM domain-containing protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1G0E5I3_9GAMM) HSP 1 Score: 226 bits (577), Expect = 5.110e-71 Identity = 108/193 (55.96%), Postives = 138/193 (71.50%), Query Frame = 1
Query: 10 DVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEA-RKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+V E++ ANP I YK+ G + +P Q+ILP K+R+GIVIN+PE+RLYYF DG+ + TYPV LGR WRTP+ VVRK+E PTW+VP SI+ K G LPD++PPGP+NPLG YA+YL GYLIHGT +PNS+G +SSGC+R+ + + LY V+ G PV II YPNK GWRG+KLYLES
Sbjct: 58 EVSYDELLEANPNINFYKLKVGQRIFIPKQFILP--KFRQGIVINIPELRLYYFDPDGSHVHTYPVGLGRMGWRTPMAAATVVRKEEDPTWYVPNSIRDYVLNKTGELLPDAVPPGPKNPLGKYALYLSKNGYLIHGTNAPNSVGTFISSGCMRLLREPIELLYQEVQVGTPVRIINYPNKAGWRGDKLYLES 248
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A2D6YD82_9GAMM (LysM domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2D6YD82_9GAMM) HSP 1 Score: 225 bits (573), Expect = 1.270e-70 Identity = 115/195 (58.97%), Postives = 145/195 (74.36%), Query Frame = 1
Query: 4 RFDVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAE-ARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+ DVGI E+ ANP I K+ G VI+P Q+ILPPQ++RKGIV+N+ E+RLYYF+ +G I TYPV++GR WRTP T +V+ +E PTWHVP SI A K G ELP+SIPPGP NPLG AIYLG+P YLIHGT +P+SIG+ VSSGCIRM+N+DV L+ VK GDPV+II + KVG + N+LYLE+
Sbjct: 47 KHDVGIIELKRANPTISRLKV--GDVVIIPKQFILPPQEFRKGIVLNMAELRLYYFSPNGQFIFTYPVSMGRIGWRTPSASTTIVKMKEYPTWHVPESIAAHHLEKTGNELPESIPPGPDNPLGTRAIYLGLPKYLIHGTNAPSSIGQYVSSGCIRMYNQDVEQLFMFVKPGDPVTIINHRIKVGVKDNQLYLEA 239
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: K2DRN8_9BACT (LysM domain-containing protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=K2DRN8_9BACT) HSP 1 Score: 220 bits (561), Expect = 1.340e-68 Identity = 105/193 (54.40%), Postives = 134/193 (69.43%), Query Frame = 1
Query: 10 DVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEA-RKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+V E++ ANP I Y++ G VI+P Q+ILP K+R+GIVIN E+RLYYF DG I T+PV LGR WRTPL VVRK+ P WHVP I+ +K G LP+++PPGP+NPLG YA+YL GYLIHGT +P+S+G +SSGC+R+ + + LY + G PV II+YPNK GWRGNKLYLES
Sbjct: 57 EVSYDELLEANPNINFYRLRVGQKVIIPKQFILP--KFRRGIVINAAELRLYYFTPDGEYIHTFPVGLGRVDWRTPLASATVVRKEADPVWHVPNDIRDYVYKKTGELLPENVPPGPKNPLGSYALYLSKSGYLIHGTNAPHSVGTFISSGCMRLMREPIEMLYQEAQVGTPVHIIHYPNKAGWRGNKLYLES 247
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A423Q2R7_9GAMM (YkuD domain-containing protein n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A423Q2R7_9GAMM) HSP 1 Score: 212 bits (539), Expect = 3.170e-65 Identity = 101/199 (50.75%), Postives = 138/199 (69.35%), Query Frame = 1
Query: 1 QRFDVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-----ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+R++VG E+ ANP++ P+ GT V++P +Y+LP R+GIVIN+PEMR+YYF +G+ + T+P+ +GRE W TPLGKT +VRK+ PTW PASI+ E G ELPD +P GP NPLG +A+YLGMP YL+HGT P IG VS GCIR++ +D+ L+S V+ G PV+II P K+G GN LY+E+
Sbjct: 56 RRYNVGYRELRLANPEVDPWLPGEGTEVVIPTRYVLPDVP-RRGIVINIPEMRVYYFPPEGSEYAGRVVTHPLGIGREGWSTPLGKTTIVRKKADPTWTPPASIRKEHAAQGEELPDVVPAGPDNPLGQHALYLGMPSYLLHGTNKPAGIGLKVSHGCIRLYPEDIASLFSMVEPGTPVNIISEPYKIGREGNTLYIEA 253
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A2E0J076_9GAMM (L,D-transpeptidase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E0J076_9GAMM) HSP 1 Score: 212 bits (539), Expect = 3.670e-65 Identity = 102/199 (51.26%), Postives = 135/199 (67.84%), Query Frame = 1
Query: 1 QRFDVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAAD-----GTISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+R++VG E+ ANP + P+ GT V++P +Y+LP RKGIVIN+PEMRLYY+ + G + TYP+ +GRE W TPL KT +VRK+ PTW PASI+AE K G LP +P GP NPLG +A+YLG+P YL+HGT P IG VS GCIR++ +D+ L++ V G PV+II P K+GW GN LY+ES
Sbjct: 62 RRYNVGYRELRLANPDVDPWLPGEGTPVVIPTRYVLP-DVARKGIVINIPEMRLYYYPPENSEYAGKVVTYPLGIGREGWSTPLAKTSIVRKKADPTWTPPASIRAEHEKAGDPLPAVVPAGPDNPLGQHALYLGLPSYLLHGTNKPAGIGLKVSHGCIRLYPEDIASLFALVPTGTPVNIISQPYKIGWEGNTLYIES 259
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A0S7Y0H2_9COXI (LysM domain-containing protein n=1 Tax=Coxiella sp. DG_40 TaxID=1703354 RepID=A0A0S7Y0H2_9COXI) HSP 1 Score: 211 bits (536), Expect = 4.840e-65 Identity = 103/197 (52.28%), Postives = 137/197 (69.54%), Query Frame = 1
Query: 1 QRFDVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPG-PRNPLGPYAIYLG-MPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+ ++V E++ ANP+I P ++PGT V++P Q+ILP KYRKGIVIN+PE+RLYYF D + T PV LGR+ WRTP T V++K+ +PTWHVP +I KNG ++P+ +PPG P NPLG Y +YLG GYLIHG P++IG+ SSGCIR++N + LYS V G V II+ P+KVGW +LYLES
Sbjct: 48 KEYEVSYHELLEANPEINPKNLIPGTKVLIPTQFILP--KYRKGIVINIPELRLYYFMPDREHVFTTPVGLGRDSWRTPTMLTGVIKKEANPTWHVPKTILKHEAKNGHQIPNEVPPGDPDNPLGNYVLYLGGKGGYLIHGNNEPDTIGKYYSSGCIRLYNSAMETLYSMVAVGTLVRIIHDPDKVGWLNGELYLES 242
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A3M0YCQ1_9GAMM (L,D-transpeptidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YCQ1_9GAMM) HSP 1 Score: 211 bits (536), Expect = 5.710e-64 Identity = 100/195 (51.28%), Postives = 135/195 (69.23%), Query Frame = 1
Query: 1 QRFDVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+RFD+G E++ NP + P+ GT +++P Q++LP + R+GIV+N+PEMRLYY+ G + TYPV +GRE W TPLGKT +V + +P+W+ PASI+ E G LP +PPGP NPLG +A+ LG PGYLIHGT P IG VS GCIR++ +D+ +L+SRVK G PV II P K GW+ KLYLE+
Sbjct: 46 RRFDLGYDELVRVNPGVDPWLPGEGTEIVLPTQFVLP-RAPREGIVLNLPEMRLYYYPPGGREVVTYPVGIGREGWDTPLGKTRIVARVANPSWYPPASIRKEHEAQGDPLPKVVPPGPDNPLGDFALRLGFPGYLIHGTNKPYGIGMRVSHGCIRLYPEDIAELFSRVKVGTPVHIIDQPYKAGWKEGKLYLEA 239
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: U2E4I5_9GAMM (Peptidoglycan LD-transpeptidase lipoprotein YkuD family SPOR domain-containing n=2 Tax=Salinisphaera TaxID=180541 RepID=U2E4I5_9GAMM) HSP 1 Score: 209 bits (531), Expect = 6.080e-64 Identity = 101/199 (50.75%), Postives = 134/199 (67.34%), Query Frame = 1
Query: 1 QRFDVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADGT-----ISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+R++VG E+ +NP + P+ GT +++P Y+LP RKGIVIN+PEMRLYYF G+ + TYP+ +GRE W TPL KT VVRK+ PTW PASI+AE K G LP +P GP NPLG +A+YLG+P YL+HGT P IG VS GCIR++ +D+ L++ V G PV+I+ P K+GW GN LY+ES
Sbjct: 63 RRYNVGYRELRLSNPDVDPWLPGDGTPMVIPTHYVLP-NVPRKGIVINIPEMRLYYFPPAGSEYAGKVVTYPLGIGREGWSTPLAKTTVVRKRADPTWTPPASIRAEHEKAGDPLPAVVPAGPDNPLGQHALYLGLPSYLLHGTNKPAGIGLKVSHGCIRLYPEDIASLFALVPTGTPVNIVSEPYKIGWEGNTLYIES 260
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: A0A2E3MFB4_9GAMM (LysM domain-containing protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MFB4_9GAMM) HSP 1 Score: 206 bits (524), Expect = 7.310e-63 Identity = 93/195 (47.69%), Postives = 135/195 (69.23%), Query Frame = 1
Query: 1 QRFDVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAADG-TISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
QR +G E++ ANP++ P + + GT ++VP +++LP + RKGIVIN+ E+RLYY+ + T+ TYP+ +GR+ W TP G ++++++ P W VPAS+ A+A +NG LP +PPGP NPLG YA+ L P YLIHGT PN +GR VS+GCIRM+ +D+ +YS+V PV+I+ P K GW KLYLE+
Sbjct: 74 QRNHIGYYELLEANPQVNPMQPIAGTKILVPTRFVLP-KAPRKGIVINLAELRLYYYPPNSNTVQTYPIGIGRQGWETPTGTLKIIQRKKDPAWRVPASVWADAAENGIVLPKVVPPGPDNPLGQYALRLSRPNYLIHGTNKPNGVGRRVSAGCIRMYPEDIKRMYSQVSINTPVTIVNQPFKTGWLNGKLYLEA 267
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Match: D5BWC6_NITHN (ErfK/YbiS/YcfS/YnhG family protein n=3 Tax=Nitrosococcus TaxID=1227 RepID=D5BWC6_NITHN) HSP 1 Score: 205 bits (521), Expect = 2.130e-62 Identity = 102/199 (51.26%), Postives = 136/199 (68.34%), Query Frame = 1
Query: 1 QRFDVGISEMMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAAD-----GTISTYPVALGREKWRTPLGKTYVVRKQESPTWHVPASIQAEARKNGRELPDSIPPGPRNPLGPYAIYLGMPGYLIHGTTSPNSIGRLVSSGCIRMFNKDVTDLYSRVKKGDPVSIIYYPNKVGWRGNKLYLES 582
+R+DVG SE+ +ANP I P+ G+ V+VP QY+LP Q R+GIVIN+ EMRLYYF G + T+P+ +GRE W TPLGKT V+ K+++PTW P SI+AE NG LP +PPG NPLG +A+ LGMPGYLIHGT P +G VS GCIR++ +D+ L+++VK G V+I+Y P K G + LYLE+
Sbjct: 64 RRYDVGYSEIKAANPNIDPWLPKEGSPVVVPTQYVLP-QAPRRGIVINLAEMRLYYFPESQPGQPGVVVTHPIGIGREGWSTPLGKTSVISKKKNPTWIPPESIRAEHEANGDPLPKVVPPGSDNPLGKFALRLGMPGYLIHGTNRPWGVGMRVSHGCIRLYPEDIASLFAQVKVGASVNIVYQPFKAGIKDAVLYLEA 261 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112070.2528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112070.2528.1 >prot_M-pyrifera_M_contig112070.2528.1 ID=prot_M-pyrifera_M_contig112070.2528.1|Name=mRNA_M-pyrifera_M_contig112070.2528.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp MMSANPKIKPYKMLPGTNVIVPAQYILPPQKYRKGIVINVPEMRLYYFAAback to top mRNA from alignment at M-pyrifera_M_contig112070:5..586+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112070.2528.1 ID=mRNA_M-pyrifera_M_contig112070.2528.1|Name=mRNA_M-pyrifera_M_contig112070.2528.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig112070:5..586+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112070:5..586+ >mRNA_M-pyrifera_M_contig112070.2528.1 ID=mRNA_M-pyrifera_M_contig112070.2528.1|Name=mRNA_M-pyrifera_M_contig112070.2528.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig112070:5..586+ (Macrocystis pyrifera P11B4 male)back to top |