mRNA_M-pyrifera_M_contig112050.2523.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A7S2WVW5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVW5_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.340e-31 Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 QYALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAELEQD 333
Q+A+RELQ+LSD+GIYETL L S+ +AA GVFH N L L L+SPH A GA+S + EVMVM+ +DG S AID+FP+M++DA+EE W+R E H+ R+ F +E+D
Sbjct: 24 QFAVRELQKLSDSGIYETLALHSIVSAARQDGVFHFNTHLNLELTSPHFASGAASEKFEVMVMKHKDDGSYSFAIDDFPEMNEDAIEEFWIRKVERHRLLRDEAFRLMERD 134
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A7S2CU23_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CU23_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.020e-29 Identity = 56/111 (50.45%), Postives = 78/111 (70.27%), Query Frame = 1
Query: 1 QYALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAELEQD 333
++A+ ELQ+LSD+GIY +L L S+ A+S GVFH N FLTL L+ PH G + ++VMVMR +EDG S AIDEFP+MD+DA+E W++ E H+ +RE F ++E D
Sbjct: 77 EFAVGELQKLSDSGIYRSLSLRSIRTASSQEGVFHHNTFLTLELACPHFKSGHDAETYDVMVMRHLEDGTYSFAIDEFPEMDEDAIETFWIQKVEQHRRYREETFRQMELD 187
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A7S2CNQ6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CNQ6_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.510e-29 Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = 1
Query: 1 QYALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAELEQD 333
++AL ELQ+LSD+GIY TL LD + +AA+ G+FH N FL+++ SSP+ GA +EVMVMR EDG S AID+FP+MDDDA+E W++ E H+ RE F ++E D
Sbjct: 15 EFALGELQKLSDSGIYRTLSLDRIVSAATQDGIFHMNTFLSMQFSSPYFKSGALVEVYEVMVMRHKEDGTFSFAIDDFPEMDDDAIERFWIQKVEEHRRSREEAFRQMELD 125
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A5A8EMB3_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EMB3_CAFRO) HSP 1 Score: 111 bits (277), Expect = 2.060e-28 Identity = 59/110 (53.64%), Postives = 78/110 (70.91%), Query Frame = 1
Query: 4 YALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAELEQD 333
+AL EL+ LS++GIYETL LD + AA+ G FH+N +LTL LSSPHL SS H+V+VM +EDGVRS AIDEFP MD DA+E+ W+R + RE +F +LE++
Sbjct: 61 FALSELRLLSESGIYETLSLDKIHYAANQVGAFHNNTYLTLELSSPHLLHATSSL-HDVIVMADLEDGVRSFAIDEFPVMDGDAIEQFWIRKVMETKREREALFRQLEEE 169
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A7S1G8R3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8R3_9STRA) HSP 1 Score: 107 bits (267), Expect = 8.720e-28 Identity = 50/98 (51.02%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 40 GIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAELEQD 333
G+Y +L L + A++ G+FH N FLTL L+SPH A G + H+VMVM+++EDGV S AIDEFP+MD+DA+E W+ EAH+ +RE FA +E D
Sbjct: 1 GVYRSLELSRIEEASTQDGIFHHNTFLTLVLASPHFAGGVPESRHQVMVMKALEDGVLSFAIDEFPEMDEDAIEAFWIEKVEAHRRFREASFAAIEAD 98
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A7S3XTW5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW5_HETAK) HSP 1 Score: 105 bits (262), Expect = 1.430e-26 Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 16 ELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAEL 324
EL+ SDTGIYETL LD + +A G++H+N++L L LSS H A S +VM+ +EDGVRS AID FP DD+A+EE ++ E H+ WRE+VF EL
Sbjct: 1 ELRMSSDTGIYETLHLDKILSAWMQEGIYHENIYLELSLSSIHFASRKESETFNFIVMKHLEDGVRSFAIDRFPYFDDEAIEEFYIGKVEKHRRWREKVFQEL 103
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A485LJJ4_9STRA (Aste57867_20382 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJJ4_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.270e-23 Identity = 53/110 (48.18%), Postives = 70/110 (63.64%), Query Frame = 1
Query: 4 YALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAELEQD 333
+A+ ELQ+LSDTGIY TL L + +AA+ G FH N FL L L+SPH G + V+VM+S D + S AIDEFP MDDDA+E W+ E ++ R +FAE +D
Sbjct: 46 FAVTELQKLSDTGIYTTLSLTRIKSAATQVGDFHFNTFLDLELASPHFKSGRPTESFSVVVMQSKLDDILSFAIDEFPVMDDDAIERFWIDMVERNRAKRRELFAEWNED 155
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A835ZC54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC54_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.840e-23 Identity = 51/110 (46.36%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 4 YALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAELEQD 333
+A+ EL++LSDTG+YE+L L S+ AAA+ GV+HDN FLTL L+SPH G++ E EVMVM+ DG R+ AI EFP M A+E+ +++ +A ++ R+ EL+++
Sbjct: 17 WAVSELRKLSDTGVYESLALKSIKAAATGAGVYHDNTFLTLVLASPHFDGGSAEEEFEVMVMQHKTDGHRNFAISEFPAMAAGAIEQFYMQKVDADRKLRDAALQELDRE 126
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A7S3H248_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H248_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.290e-23 Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 1 QYALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVEDGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFAELE 327
++A+ EL +LSD+ IY TL L ++ AA G+FH N LTL L SPH S E++++VM EDGV++LAIDEFP MD+DA+EE ++R E ++ RE F LE
Sbjct: 44 EFAVAELSKLSDSEIYTTLSLKKINYAAEQDGIFHFNTLLTLELESPHFKSKKSVEEYKMIVMLHKEDGVKALAIDEFPVMDEDAIEEFYIRKIENRRKQREESFRRLE 152
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Match: A0A1V9ZMN4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMN4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 8.720e-23 Identity = 48/107 (44.86%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 1 QYALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLADGASSTEHEVMVMRSVE-DGVRSLAIDEFPDMDDDAVEEHWVRSAEAHQEWRERVFA 318
++A+ EL++LSDTGIY TL L + + A+ G FH N +LTL L+SPH G +E++VM S++ D +S AID FP+MDDDA+E W+ E ++ R +FA
Sbjct: 44 EFAVTELRRLSDTGIYTTLSLHEIKSGATQEGDFHYNTYLTLELASPHFKSGQPVEPYEIVVMESLDADRRKSFAIDNFPEMDDDAIEAFWIEMVEHRRQQRREIFA 150 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112050.2523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112050.2523.1 >prot_M-pyrifera_M_contig112050.2523.1 ID=prot_M-pyrifera_M_contig112050.2523.1|Name=mRNA_M-pyrifera_M_contig112050.2523.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp QYALRELQQLSDTGIYETLRLDSVSAAASARGVFHDNVFLTLRLSSPHLAback to top mRNA from alignment at M-pyrifera_M_contig112050:15..518- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112050.2523.1 ID=mRNA_M-pyrifera_M_contig112050.2523.1|Name=mRNA_M-pyrifera_M_contig112050.2523.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig112050:15..518- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112050:15..518- >mRNA_M-pyrifera_M_contig112050.2523.1 ID=mRNA_M-pyrifera_M_contig112050.2523.1|Name=mRNA_M-pyrifera_M_contig112050.2523.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig112050:15..518- (Macrocystis pyrifera P11B4 male)back to top |