mRNA_M-pyrifera_M_contig112020.2514.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: L8GQC0_ACACA (RhoGEF domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQC0_ACACA) HSP 1 Score: 109 bits (272), Expect = 2.670e-25 Identity = 50/117 (42.74%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 16 VKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVEKWNAFQCIGPLFLKLVAFMK 366
++ Q+LVRG+L + RY + R+VAYR +VA EIL TE YV+S+ C+ V++ PL PL++ A ++IFS++ +L FN+EL E+E V KW ++C+G +FL+LV ++K
Sbjct: 199 IRFQSLVRGYLQKQRYRAMVRNVAYRSRVAHEILDTESFYVKSMNQCITVWLNPLNDAIASGSPLINAADVRAIFSDIALLYTFNSELYSEIESRVAKWGTYECLGDIFLRLVDYLK 315
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: L8GN17_ACACA (RhoGEF domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GN17_ACACA) HSP 1 Score: 102 bits (253), Expect = 9.990e-23 Identity = 50/120 (41.67%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 7 KGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVEKWNAFQCIGPLFLKLVAFMK 366
+GVVKLQAL+RG LAR++Y + R+ AYR+ VA+EI TE+ YV++L V++EPL+K L FK +F+++ V+ N+N ++L +++P + KW+ Q +G +FL++ AF+K
Sbjct: 332 RGVVKLQALLRGRLARVKYRKKLRNAAYRESVAREIEKTEQDYVDNLRLLSEVFLEPLRKELESKDEALEG--FKGVFADIQVIRNYNGKMLNDIKPRLAKWHPNQSLGDIFLQVAAFLK 449
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: L8HHL5_ACACA (RhoGEF domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHL5_ACACA) HSP 1 Score: 97.4 bits (241), Expect = 3.940e-21 Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 7 KGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDS--KPL-------LSPAQFKSIFSELPVLLNFNAELLGELEPLVEKWNAFQCIGPLFLKLVAFMK 366
+GVV LQALVRG AR Y + R VAYR+ VA+EIL TE+ YV +L + V++ P+K++ D+ KP ++ + KS++++L V++N+N +LL +L P VEKW Q +G +FL+L F+K
Sbjct: 177 RGVVLLQALVRGGRARKAYIKRVRDVAYRENVAREILQTEKDYVNNLMLLMSVFINPIKESLTDNVWKPKNGSKLGEVTLKEVKSLYNDLQVIVNYNGKLLRDLTPRVEKWTPHQKLGDIFLQLGLFLK 305
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: UPI000644FED1 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644FED1) HSP 1 Score: 92.8 bits (229), Expect = 1.700e-19 Identity = 47/122 (38.52%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 4 EKGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKK-TQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVEKWNAFQCIGPLFLKLVAFMK 366
EK +K+QALVRGHLAR + + R+ AYR +A E+LATE Y++ L ++ Y EP+++ R +FK IFS + V+ N+N+ LL +L+P++E W+ + IG +F++ + +K
Sbjct: 420 EKKWIKVQALVRGHLARRDFHKRVRNSAYRHNIADELLATEEMYIKHLDRLIVHYFEPIQEQATRIGIKATMLEEFKKIFSNIEVIRNYNSSLLADLKPVIENWSNSKTIGKIFIQFIFLLK 541
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: F1A1K8_DICPU (Uncharacterized protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A1K8_DICPU) HSP 1 Score: 88.6 bits (218), Expect = 5.110e-18 Identity = 50/123 (40.65%), Postives = 73/123 (59.35%), Query Frame = 1
Query: 4 EKGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVE--KWNAFQCIGPLFLKLVAFMK 366
E+G ++ QAL RG R +I R VAYR+KVA EIL TE YV++L C+ YMEPL SK L++ Q K IFS++ ++ NF + L +L+ + KW +Q + +F+ + AF K
Sbjct: 212 ERGFIRFQALFRGFKTRQMVKKIRRDVAYREKVASEILKTEEDYVKNLNLCIKYYMEPLL-----SKELITKEQQKLIFSDISIIYNFGNKFLEQLKGRCQPGKWYVYQKLSDMFISISAFFK 329
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: A0A7S4L2J6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L2J6_9EUKA) HSP 1 Score: 84.0 bits (206), Expect = 5.420e-18 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 1
Query: 1 MEKGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVEKW 312
+EK K QALVRG+LAR RY +I R+ AYR++V KE+L+TE +YV L+ + V+M PL K K +SP SIFS +P + + NA LL E+ V+ W
Sbjct: 68 IEKSCAKFQALVRGYLARKRYRQIIRNAAYRERVVKELLSTEETYVNDLSAAIDVFMIPLSKR---GKKDISP----SIFSTMPQIRDKNAALLSEIRDRVDHW 164
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: F1A4T1_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A4T1_DICPU) HSP 1 Score: 87.8 bits (216), Expect = 9.560e-18 Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 1
Query: 4 EKGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVEKWNAFQCIGPLFLKLVAFMK 366
EK +++Q+LVRGHLAR Y + R+ AYR + KE+LATE+ Y+E+L L Y P++ + SK + F + S L V++N+N LL ++P V+ W+ Q IG +F + ++K
Sbjct: 287 EKKWIRIQSLVRGHLARRAYLKRVRYAAYRHNIVKELLATEKVYIENLEHLLSHYFNPMR--EESSKLNIKMDHFGLLISNLEVIINYNKNLLDIIKPKVDNWSHSQTIGDVFEQFTLYLK 405
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: A0A151Z724_9MYCE (Pleckstrin (PH) domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z724_9MYCE) HSP 1 Score: 87.4 bits (215), Expect = 1.340e-17 Identity = 49/122 (40.16%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 1 MEKGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVEKWNAFQCIGPLFLKLVAFMK 366
M + +Q+ VRG L RLRY E+ RH+A R+K A EI+ TER+YV++L + ++ PL+ T++D LLS A+ S+FS ++ + ELL LE KW+ Q + FL L F+K
Sbjct: 1120 MHNKITLIQSHVRGWLQRLRYREMMRHIALRNKCANEIMETERNYVQNLGILIDQFLVPLQTTKKD---LLSSAEITSVFSNCSLIHGVHKELLDSLEKKYAKWSNEQSLAVCFLDLTPFLK 1238
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: A0A7S4KYE4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KYE4_9EUKA) HSP 1 Score: 85.5 bits (210), Expect = 1.530e-17 Identity = 35/96 (36.46%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 79 HVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVEKWNAFQCIGPLFLKLVAFMK 366
H + K+ KE+L+TE +YV SL TC++V+++PL +D +P++S + K IF+ + + F+ LLG+++ +E+WN F CI +FL + ++K
Sbjct: 19 HETEKMKILKELLSTEETYVRSLDTCIVVWLDPLDARLKDKRPIISQDEIKVIFASIKTIFMFHTVLLGDIKSRLEQWNCFSCIADIFLGFLHYLK 114
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Match: L8HB33_ACACA (Calponin domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HB33_ACACA) HSP 1 Score: 85.9 bits (211), Expect = 4.450e-17 Identity = 49/121 (40.50%), Postives = 74/121 (61.16%), Query Frame = 1
Query: 4 EKGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTTCLIVYMEPLKKTQRDSKPLLSPAQFKSIFSELPVLLNFNAELLGELEPLVEKWNAFQCIGPLFLKLVAFMK 366
E VV+LQA +RG +AR R+ E + R + A+E+L +E YV+SL + V++ PL+K LSP Q K++FSE+ V++N+ A LL +E + W QC+G +FLKL F+K
Sbjct: 525 EHLVVRLQAQLRGWVARKRFREQVYMLGQRTETARELLRSENIYVDSLRVIVEVFLTPLRKPGS----ALSPWQVKAVFSEVEVIMNYTAILLDRVEKKLAAWTHNQCLGEIFLKLTDFLK 641 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112020.2514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112020.2514.1 >prot_M-pyrifera_M_contig112020.2514.1 ID=prot_M-pyrifera_M_contig112020.2514.1|Name=mRNA_M-pyrifera_M_contig112020.2514.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp MEKGVVKLQALVRGHLARLRYAEISRHVAYRDKVAKEILATERSYVESLTback to top mRNA from alignment at M-pyrifera_M_contig112020:165..586+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112020.2514.1 ID=mRNA_M-pyrifera_M_contig112020.2514.1|Name=mRNA_M-pyrifera_M_contig112020.2514.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=422bp|location=Sequence derived from alignment at M-pyrifera_M_contig112020:165..586+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112020:165..586+ >mRNA_M-pyrifera_M_contig112020.2514.1 ID=mRNA_M-pyrifera_M_contig112020.2514.1|Name=mRNA_M-pyrifera_M_contig112020.2514.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig112020:165..586+ (Macrocystis pyrifera P11B4 male)back to top |