mRNA_M-pyrifera_M_contig111937.2495.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A3E0Q637_9BACT (GxxExxY protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q637_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 3.400e-8 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGAN 96
MKLLN P+GL++NFY E+LTDG+ R+ LPGAN
Sbjct: 101 MKLLNAPLGLLLNFYTEKLTDGLQRLLLPGAN 132
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A660QEU8_9BACT (GxxExxY protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A660QEU8_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 9.940e-8 Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGANSE 102
MKL+++PVGL+MNF+ +L DG++RM LPGAN E
Sbjct: 86 MKLMDIPVGLIMNFHEMKLVDGIYRMMLPGANRE 119
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A7C5QE38_9BACT (GxxExxY protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7C5QE38_9BACT) HSP 1 Score: 52.4 bits (124), Expect = 1.930e-7 Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGANSE 102
MKLLN P+GL++NF+ +L DG+HR+ LPGAN E
Sbjct: 101 MKLLNTPIGLLINFHELKLADGIHRLMLPGANHE 134
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A146GCY5_TERSA (GxxExxY protein n=2 Tax=Terrimicrobium sacchariphilum TaxID=690879 RepID=A0A146GCY5_TERSA) HSP 1 Score: 50.4 bits (119), Expect = 3.880e-7 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGANSE 102
MKLLNVP+GL++NF+ +LT G+HRM LPG++ +
Sbjct: 52 MKLLNVPLGLLINFHEPKLTSGIHRMMLPGSSGK 85
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A2V5P3C2_9BACT (GxxExxY protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5P3C2_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 5.140e-7 Identity = 21/32 (65.62%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGAN 96
MKLL+VPVGL++NF+ +L DG+HR+ LPGAN
Sbjct: 101 MKLLDVPVGLLINFHEMKLVDGIHRLILPGAN 132
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A1G4AJF4_9BACT (GxxExxY protein n=1 Tax=Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8 TaxID=1802434 RepID=A0A1G4AJF4_9BACT) HSP 1 Score: 50.4 bits (119), Expect = 1.020e-6 Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGAN 96
MKLLNVPVGL++NF RL DGV R+ LPGAN
Sbjct: 101 MKLLNVPVGLLINFNTARLIDGVSRLILPGAN 132
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A4P5YCT3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4P5YCT3_9BACT) HSP 1 Score: 50.4 bits (119), Expect = 1.040e-6 Identity = 22/34 (64.71%), Postives = 29/34 (85.29%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGANSE 102
MKLL++P+GL++NF V +LTDGV R+ LPGAN E
Sbjct: 101 MKLLDIPLGLLINFNVMKLTDGVSRLILPGANLE 134
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A8I1MLE9_9BACT (GxxExxY protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A8I1MLE9_9BACT) HSP 1 Score: 50.4 bits (119), Expect = 1.040e-6 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGANSE 102
MKLLNVP+GL++NF+ +LT G+HRM LPG++ +
Sbjct: 101 MKLLNVPLGLLINFHEPKLTSGIHRMMLPGSSGK 134
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: X0Y9E2_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0Y9E2_9ZZZZ) HSP 1 Score: 50.4 bits (119), Expect = 1.060e-6 Identity = 22/33 (66.67%), Postives = 29/33 (87.88%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGANS 99
MKLL++P+GL++NF VE+LTDGV R+ LP ANS
Sbjct: 101 MKLLDIPLGLLINFNVEKLTDGVSRLILPQANS 133
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Match: A0A1H1SB26_9BACT (GxxExxY protein n=1 Tax=Opitutus sp. GAS368 TaxID=1882749 RepID=A0A1H1SB26_9BACT) HSP 1 Score: 50.1 bits (118), Expect = 1.440e-6 Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 1
Query: 1 MKLLNVPVGLVMNFYVERLTDGVHRMYLPGAN 96
MKLL+VPVGL++NF V +LTDGV R+ LPG N
Sbjct: 101 MKLLDVPVGLLINFNVSKLTDGVSRLMLPGVN 132 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111937.2495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111937.2495.1 >prot_M-pyrifera_M_contig111937.2495.1 ID=prot_M-pyrifera_M_contig111937.2495.1|Name=mRNA_M-pyrifera_M_contig111937.2495.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=35bp MKLLNVPVGLVMNFYVERLTDGVHRMYLPGANSE*back to top mRNA from alignment at M-pyrifera_M_contig111937:482..586- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111937.2495.1 ID=mRNA_M-pyrifera_M_contig111937.2495.1|Name=mRNA_M-pyrifera_M_contig111937.2495.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=105bp|location=Sequence derived from alignment at M-pyrifera_M_contig111937:482..586- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111937:482..586- >mRNA_M-pyrifera_M_contig111937.2495.1 ID=mRNA_M-pyrifera_M_contig111937.2495.1|Name=mRNA_M-pyrifera_M_contig111937.2495.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=210bp|location=Sequence derived from alignment at M-pyrifera_M_contig111937:482..586- (Macrocystis pyrifera P11B4 male)back to top |