mRNA_M-pyrifera_M_contig111771.2459.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: A0A453T6E7_AEGTS (ANAPC4_WD40 domain-containing protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453T6E7_AEGTS) HSP 1 Score: 178 bits (452), Expect = 6.700e-50 Identity = 87/189 (46.03%), Postives = 120/189 (63.49%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F EPIL+SS DN++K+WIFD +G ARLLR RS H PPR RFY + + +L+ G+DR R F QD+++ ELSQ H+ KR+K+L+V E +KL ++F + +R RDW N+V+CH AY+W + + L S ESP+ A +S CG F I+ TE GW+EKFN+QSG+ RGS
Sbjct: 277 FFANEPILMSSAADNSIKMWIFDNNEGDARLLRFRSGHSAPPRCIRFYGNGKSILSAGQDRAFRLFSVVQDQQSRELSQRHVAKRAKKLRVKEEEIKLKPVIAFDCAEIRARDWCNVVTCHMDTSKAYVWRLQNFVIGEHI---LTPSSETESPIKACTISACGNFTILGTEGGWIEKFNLQSGISRGS 462
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: A0A251VMZ1_HELAN (Putative transducin family protein / WD-40 repeat family protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VMZ1_HELAN) HSP 1 Score: 181 bits (460), Expect = 1.180e-49 Identity = 87/189 (46.03%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F EP+L+S+ DN++K+WIFD DG RLLR RS H PP +FY + + +L+ G+DR R F QD+++ ELSQ H+ KR+K+LKV E +KL ++F + +RERDW+N+V+CH HAY+W + L L + ++PV A +STCG+FAI+ T GW+EKFN+QSGL RGS
Sbjct: 276 FFANEPVLMSTSADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVTKRAKKLKVKEEEIKLKPVIAFDVAEIRERDWSNVVTCHMDTPHAYVWRLQNFVLGEHI---LTPTTDIQAPVKACAISTCGSFAIIGTAAGWIEKFNLQSGLSRGS 461
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: A0A0D6QUZ2_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QUZ2_ARACU) HSP 1 Score: 180 bits (457), Expect = 3.150e-49 Identity = 89/189 (47.09%), Postives = 121/189 (64.02%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F EP+L+SS DN++K+WIFD DG ARLLR RS H PP R+Y + +L+ G+DR R F QD+++ ELSQGH+ KR+K+LKV E +KL ++F A+ +RERDW N+V+CH D AY W + + L S +PV A +STCG FA++ TE GW+E+FN+QSG RGS
Sbjct: 276 FFANEPVLMSSATDNSIKMWIFDTSDGEARLLRFRSGHSAPPTCIRYYGKGRHILSAGQDRAFRIFSVIQDQQSKELSQGHVAKRAKKLKVKEEEVKLPPVIAFDAAEIRERDWCNVVTCHLDDPCAYTWRLQNFVIGEHI---LRPSCEIPTPVKACSISTCGNFAVLGTEGGWIERFNLQSGYSRGS 461
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: A0A2U1MKU8_ARTAN (Transducin family protein / WD-40 repeat family protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MKU8_ARTAN) HSP 1 Score: 179 bits (455), Expect = 4.980e-49 Identity = 85/189 (44.97%), Postives = 122/189 (64.55%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F EP+L+S+ DN++K+WIFD DG RLLR RS H PP RFY + + +L+ G+DR R F QD+++ ELSQ H+ KR+K+LK+ E +KL ++F + +RERDW+N+V+CH HAY+W + L L S ++PV A +S+CG FA++ T GW+EKFN+QSG+ RGS
Sbjct: 238 FFANEPVLMSTSADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVTKRAKKLKLKDEEIKLKPVIAFDVAEIRERDWSNVVTCHMDTPHAYVWRLQNFVLGEHI---LTPSADIQTPVKACTISSCGNFAVIGTAGGWIEKFNLQSGISRGS 423
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: UPI000D62D406 (U3 small nucleolar RNA-associated protein 21 homolog n=2 Tax=Asteraceae TaxID=4210 RepID=UPI000D62D406) HSP 1 Score: 179 bits (455), Expect = 5.760e-49 Identity = 86/189 (45.50%), Postives = 122/189 (64.55%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F EP+L+S+ DN++K+WIFD DG RLLR RS H PP RFY + + +L+ G+DR R F QD+++ ELSQ H+ KR+K+LK+ E +KL ++F + +RERDW+N+V+CH HAY+W + L L S ++PV A +S+CG FAI+ T GW+EKFN+QSG+ RGS
Sbjct: 276 FFANEPVLMSTSADNSIKMWIFDTSDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVTKRAKKLKLKEEEIKLKPVIAFDVAEIRERDWSNVVTCHMDTAHAYVWRLQNFVLGEHI---LTPSADVQTPVKACTISSCGNFAILGTAGGWIEKFNLQSGMSRGS 461
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: A0A1U8A9M0_NELNU (WD repeat-containing protein 36 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8A9M0_NELNU) HSP 1 Score: 179 bits (453), Expect = 1.080e-48 Identity = 85/189 (44.97%), Postives = 122/189 (64.55%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F EP+L+SS DN++K+WIFD DG ARLLR RS H PP RFY + + +L+ G+DR R F QD+++ ELSQ H+ KR+K+LKV + +KL ++F + +RERDW N+V+CH AY+W + + L+ ++PV A +S CG +A++ TE GW+E+FN+QSGLRRGS
Sbjct: 276 FFSNEPVLMSSSADNSIKMWIFDTSDGDARLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKRAKKLKVKEDEIKLKPVIAFDFAEIRERDWCNVVTCHMDTSQAYVWRLQNFVIGKHI---LIPCPENQTPVKACSISACGNYAVLGTESGWIERFNLQSGLRRGS 461
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: A0A6I9QQU3_ELAGV (LOW QUALITY PROTEIN: WD repeat-containing protein 36 n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QQU3_ELAGV) HSP 1 Score: 178 bits (451), Expect = 2.020e-48 Identity = 88/189 (46.56%), Postives = 122/189 (64.55%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F+ EPIL+SS DN++K+WIFD DG ARLLR RS H PPR RFY + + +L+ G+DR R F QD+++ ELSQ H+ KR+K+L+ E +KL ++F + +RERDW N+V+CH AY+W + L L S ++PV A +S CG FAI+ TE GW+E+FN+QSG+ RGS
Sbjct: 276 FLANEPILMSSAADNSIKMWIFDTTDGDARLLRFRSGHSAPPRCIRFYGNGRYILSAGQDRAFRLFSVIQDQQSRELSQRHVTKRAKKLRSKEEEIKLKPVIAFDFAEIRERDWCNVVTCHMDTPRAYVWRLQNFVLGEHI---LTPSTDNQTPVKACAISACGNFAILGTEGGWIERFNLQSGISRGS 461
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: A0A5N6PUG8_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PUG8_9ASTR) HSP 1 Score: 177 bits (450), Expect = 2.310e-48 Identity = 86/189 (45.50%), Postives = 121/189 (64.02%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F EP+L+SS DN++K+WIFD DG RLLR RS H PP RFY + + +L+ G+DR R F QD+++ ELSQ H+ KR+K+LK+ E +KL ++F + +RERDW N+V+CH HAY+W + L L + ++PV A +S CG+FAI+ T GW+EKFN+QSG+ RGS
Sbjct: 276 FFADEPVLMSSSADNSIKMWIFDTSDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVTKRAKKLKLKEEEIKLKPVIAFDVAEIRERDWANVVTCHMDTLHAYVWRLQNFVLGEHI---LTPTTDIQAPVKACTISACGSFAILGTAGGWIEKFNLQSGMSRGS 461
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: K3XV61_SETIT (Uncharacterized protein n=11 Tax=PACMAD clade TaxID=147370 RepID=K3XV61_SETIT) HSP 1 Score: 177 bits (448), Expect = 5.170e-48 Identity = 87/189 (46.03%), Postives = 120/189 (63.49%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F EPIL+SS DN++K+WIFD DG ARLLR RS H PPR RFY + + +L+ G+DR R F QD+++ ELSQ H+ KR+K+L+V E +KL ++F + +R RDW N+V+CH AY+W + + L S E+P+ A +S CG F I+ TE GW+EKFN+QSG+ RGS
Sbjct: 277 FFANEPILMSSAADNSIKMWIFDNNDGGARLLRFRSGHSAPPRCIRFYGNGKCILSAGQDRAFRLFSVVQDQQSRELSQRHVTKRAKKLRVKEEEIKLKPVITFDCAEIRARDWCNVVTCHMDTPRAYVWRLQNFVIGEHI---LTPSSGTETPIKACVISACGNFTILGTEGGWIEKFNLQSGISRGS 462
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Match: A0A498IAD2_MALDO (Uncharacterized protein n=3 Tax=Maleae TaxID=721813 RepID=A0A498IAD2_MALDO) HSP 1 Score: 177 bits (448), Expect = 5.380e-48 Identity = 87/189 (46.03%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 1 FMPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAQQMLTVGEDRTMRAFFTFQDRRNCELSQGHIEKRSKQLKVAGETLKLTQCVSFAASHVRERDWNNIVSCHRSDRHAYLWSFEKKALASKASLRLLTSDPAESPVTAVEMSTCGTFAIVATERGWLEKFNVQSGLRRGS 567
F+ EP+L+SS DN++K+WIFD +DG RLLR RS H PPR RFY + + +L+ G+DR R F QD+++ ELSQ HI KR+K+LK+ E +KL +SF + +RERDW N+V+CH AY+W + L L+ +P +PV A +S CG FA++ T GW+E+FN+QSG+ RGS
Sbjct: 276 FLVNEPVLMSSSSDNSIKMWIFDTIDGDPRLLRFRSGHSAPPRCIRFYANGRHILSAGQDRAFRLFSVMQDQQSRELSQHHISKRAKKLKMKEEEIKLKPVISFDCAEIRERDWCNVVTCHMDTAEAYVWRLQNFVLGEHI-LKPRPENP--TPVKACAISACGNFAVLGTADGWVERFNLQSGISRGS 461 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111771.2459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111771.2459.1 >prot_M-pyrifera_M_contig111771.2459.1 ID=prot_M-pyrifera_M_contig111771.2459.1|Name=mRNA_M-pyrifera_M_contig111771.2459.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp MPGEPILLSSGPDNTLKVWIFDKMDGSARLLRSRSAHYRPPRMARFYKSAback to top mRNA from alignment at M-pyrifera_M_contig111771:23..589- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111771.2459.1 ID=mRNA_M-pyrifera_M_contig111771.2459.1|Name=mRNA_M-pyrifera_M_contig111771.2459.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig111771:23..589- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111771:23..589- >mRNA_M-pyrifera_M_contig111771.2459.1 ID=mRNA_M-pyrifera_M_contig111771.2459.1|Name=mRNA_M-pyrifera_M_contig111771.2459.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig111771:23..589- (Macrocystis pyrifera P11B4 male)back to top |