mRNA_M-pyrifera_M_contig111668.2433.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: A0A5A8CNY2_CAFRO (AAA domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CNY2_CAFRO) HSP 1 Score: 167 bits (423), Expect = 1.040e-46 Identity = 77/121 (63.64%), Postives = 95/121 (78.51%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
LVRETSRT+G FG R+R+ R LG L EE GL+G+VL + L R+ + A NTR N APFRHM+FYGPPGTGKTMVAKRLA+++GLDYA+M+GGD+GPLGK+ VTE+HK+ DW S R
Sbjct: 249 LVRETSRTAGTFGLRQRMKRALGMLPAEEVGLDGIVLEDKLSSRIVETASATTNTRRNGAPFRHMLFYGPPGTGKTMVAKRLARTSGLDYAVMSGGDIGPLGKDGVTELHKLLDWGETSKR 369
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: A0A812LTK1_9DINO (Atad3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LTK1_9DINO) HSP 1 Score: 152 bits (384), Expect = 1.620e-41 Identity = 74/124 (59.68%), Postives = 96/124 (77.42%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFR---RRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
LVRE+S ++G F R + + + + E + L V+LR+D+ DRV L+ A NTRAN AP+RHMMFYGPPGTGKTM+AKRLA+S+G+DYAIM+GGDVGPLGKEAVTE+H++FD+A RS R
Sbjct: 177 LVRESSASTGRFSLRGQAKHWFDSMRGVQREGESLTDVILRKDIADRVQRLAVATRNTRANGAPYRHMMFYGPPGTGKTMLAKRLARSSGMDYAIMSGGDVGPLGKEAVTELHRLFDYAERSQR 300
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: A0A6G0Q5C4_9STRA (AAA domain-containing protein (Fragment) n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q5C4_9STRA) HSP 1 Score: 137 bits (344), Expect = 6.740e-37 Identity = 68/121 (56.20%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
LVRETSR++G FGF R L+R ++E L VVLR L RV ++R+ N + AP+RH++ YGPPGTGKTMVAKRLA+++G+DYAI++GGDVGPLG +AVTE+H +F WA+ S R
Sbjct: 33 LVRETSRSAGAFGFFRSLFRRNAAKGQDE--LADVVLRNALETRVFEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPR 151
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: A0A8J2WWN2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWN2_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.960e-36 Identity = 71/121 (58.68%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
LVRETSR S R +R L AE L+GVVL L R+G ++ A NTRANAAPFRH++ +GPPGTGKT+ AK+LA+++GLDYAI+TGGDV PLG++AVTEIH++FDWA+ S R
Sbjct: 261 LVRETSRASPLDALRPAGWRRLLAPAEAGGALDGVVLEPALEKRLGHVAAATKNTRANAAPFRHVLLHGPPGTGKTLFAKKLARASGLDYAILTGGDVAPLGRDAVTEIHRLFDWAATSRR 381
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: A0A0P1AST5_PLAHL (Atpase family aaa domain-containing protein 3-b-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AST5_PLAHL) HSP 1 Score: 136 bits (342), Expect = 4.170e-35 Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRS 357
L+RETSRTSG GF L+R E+ L GVVL++ L RV ++R+ N + AP+RH++ YGPPGTGKTMVAKRLA+++G+DYAI++GGDVGPLG +AVTE+H +F WA+ S
Sbjct: 282 LIRETSRTSGMIGFINALWRRKP--VNEQNELAGVVLQKSLATRVLEIARSTRNAMQHGAPYRHLLLYGPPGTGKTMVAKRLARTSGMDYAILSGGDVGPLGSDAVTELHALFQWANSS 398
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: A0A662XUE1_9STRA (AAA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUE1_9STRA) HSP 1 Score: 136 bits (343), Expect = 5.840e-35 Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
LVRETSR+SG +GF R L+R A+ + L VVLR+ L RV ++R+ N + AP+RH++ YGPPGTGKTMVAKRLA+++G+DYAI++GGDVGPLG +AVTE+H +F WA+ S R
Sbjct: 406 LVRETSRSSGAWGFIRALFRRNS--AKGQNELADVVLRDALETRVFEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFHWANSSPR 524
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: A0A329SI18_9STRA (AAA domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A329SI18_9STRA) HSP 1 Score: 136 bits (342), Expect = 7.760e-35 Identity = 69/121 (57.02%), Postives = 89/121 (73.55%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
LVRETSR+SG FGF R L R ++E L VVLR L RV ++R+ N + AP+RH++ YGPPGTGKTMVAKRLA+++G+DYAI++GGDVGPLG +AVTE+H +F WA+ S R
Sbjct: 398 LVRETSRSSGAFGFLRALIRRKPAKGQDE--LADVVLRSSLETRVLEIARSTRNAVLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANASPR 516
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: G4ZNZ6_PHYSP (AAA domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZNZ6_PHYSP) HSP 1 Score: 134 bits (338), Expect = 2.700e-34 Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
LVRETSR++G FGF + L+R ++E L VVLR L RV ++R+ N + AP+RH++ YGPPGTGKTMVAKRLA+++G+DYAI++GGDVGPLG +AVTE+H +F W + S R
Sbjct: 395 LVRETSRSAGAFGFLKALFRRNAAKGQDE--LADVVLRNALETRVFEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWTNSSPR 513
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: A0A6S7JE42_PARCT (ATPase family AAA domain-containing 3-like (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JE42_PARCT) HSP 1 Score: 132 bits (333), Expect = 2.830e-34 Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
L+RETSR + R + WL + L+G++L+ L R+ +SRA ANT+ N +R+++FYGPPGTGKTM AK LAK +G+DYAIMTGGD+ P+G+E VT +HKVFDWAS S +
Sbjct: 156 LIRETSRLTAVGAVRHPILMVKRWLLRPQDTLQGIILKSLLESRLQEISRATANTKRNGGVYRNLLFYGPPGTGKTMFAKSLAKHSGMDYAIMTGGDIAPMGREGVTAMHKVFDWASSSKK 276
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Match: V9EJ63_PHYPR (AAA domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=V9EJ63_PHYPR) HSP 1 Score: 134 bits (337), Expect = 3.730e-34 Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 1
Query: 1 LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRAIANTRANAAPFRHMMFYGPPGTGKTMVAKRLAKSAGLDYAIMTGGDVGPLGKEAVTEIHKVFDWASRSSR 363
L+RETSR+SG FGF R L ++E L VVLR L RV ++R+ N + AP+RH++ YGPPGTGKTMVAKRLA+++G+DYAI++GGDVGPLG +AVTE+H +F WA+ S R
Sbjct: 397 LIRETSRSSGAFGFLRALISQKPAKGQDE--LADVVLRSSLETRVLEIARSTRNAMLHGAPYRHLLLYGPPGTGKTMVAKRLARASGMDYAILSGGDVGPLGSDAVTELHALFKWANSSPR 515 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111668.2433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111668.2433.1 >prot_M-pyrifera_M_contig111668.2433.1 ID=prot_M-pyrifera_M_contig111668.2433.1|Name=mRNA_M-pyrifera_M_contig111668.2433.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp LVRETSRTSGHFGFRRRLYRGLGWLAEEEQGLEGVVLREDLGDRVGILSRback to top mRNA from alignment at M-pyrifera_M_contig111668:224..589- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111668.2433.1 ID=mRNA_M-pyrifera_M_contig111668.2433.1|Name=mRNA_M-pyrifera_M_contig111668.2433.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=366bp|location=Sequence derived from alignment at M-pyrifera_M_contig111668:224..589- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111668:224..589- >mRNA_M-pyrifera_M_contig111668.2433.1 ID=mRNA_M-pyrifera_M_contig111668.2433.1|Name=mRNA_M-pyrifera_M_contig111668.2433.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig111668:224..589- (Macrocystis pyrifera P11B4 male)back to top |