mRNA_M-pyrifera_M_contig111609.2410.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: A0A7S4HHM1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HHM1_9EUKA) HSP 1 Score: 99.4 bits (246), Expect = 5.880e-25 Identity = 38/54 (70.37%), Postives = 48/54 (88.89%), Query Frame = 1
Query: 4 AMALWDFNGERESDLSFKRGDSITVIRRYSNGWWEGELNGCIGDFPCNFVELDE 165
A+ALWDF+GERE+DL FK+GD I +I+R+ NGWWEGE NG IGDFPCN+VE++E
Sbjct: 58 AVALWDFHGERETDLQFKKGDHIMIIQRFDNGWWEGEFNGFIGDFPCNYVEVEE 111
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: A0A8J4PZU9_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PZU9_9MYCE) HSP 1 Score: 72.0 bits (175), Expect = 3.930e-13 Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 KAMALWDFNGERESDLSFKRGDSITVIRRYS-NGWWEGELNGCIGDFPCNFVE 156
+ AL+D+ GE E DL+F GD ITV+ + NGWW+GELNG G FPCNF+E
Sbjct: 429 QVKALYDYPGENEGDLAFNAGDIITVLDQSDPNGWWQGELNGVTGFFPCNFIE 481
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: L8HJF3_ACACA (SH3 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJF3_ACACA) HSP 1 Score: 71.6 bits (174), Expect = 5.390e-13 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 1
Query: 1 KAMALWDFNGERESDLSFKRGDSITVIRRYSNGWWEGELNGCIGDFPCNFVE 156
K AL+D+ GE + +LSFK+GD ITV + +GWW+GELNG IG FP +VE
Sbjct: 363 KVRALFDYTGETQPELSFKKGDIITVTEKDESGWWQGELNGVIGAFPSGWVE 414
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: L8GRH9_ACACA (SH3 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRH9_ACACA) HSP 1 Score: 71.6 bits (174), Expect = 5.490e-13 Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 1 KAMALWDFNGERESDLSFKRGDSITVIRRYSN-GWWEGELNGCIGDFPCNFVELDE 165
K +AL+DF G+ + +SFKRGD+I V+++ GWWEGELNG +G FP N+V L E
Sbjct: 138 KVVALFDFTGDNDKKISFKRGDTINVLQKLQEEGWWEGELNGQVGLFPSNYVRLVE 193
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: A0A507FAW4_9FUNG (SH3 domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507FAW4_9FUNG) HSP 1 Score: 70.1 bits (170), Expect = 1.600e-12 Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 1 KAMALWDFNGERESDLSFKRGDSITVIRRYS-NGWWEGELNGCIGDFPCNFVE 156
+A AL+DF GER SDLSFK+GD IT+I+ N WW G LNG GDFP N+V+
Sbjct: 308 RATALYDFIGERPSDLSFKKGDLITIIKAGGPNDWWVGSLNGKEGDFPGNYVQ 360
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: A0A1S8W5S6_9FUNG (SH3 domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W5S6_9FUNG) HSP 1 Score: 69.7 bits (169), Expect = 2.460e-12 Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 1
Query: 1 KAMALWDFNGERESDLSFKRGDSITVIRRYSN--GWWEGELNGCIGDFPCNFVELDE 165
KA+AL+D++GER SDLSFK+GD I + + S+ WW G+ G +GDFP N+VEL +
Sbjct: 359 KAVALFDYSGERSSDLSFKQGDVIWITQSTSSQEDWWTGKCGGQLGDFPANYVELQQ 415
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: A0A1R2ASS5_9CILI (SH3 domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ASS5_9CILI) HSP 1 Score: 69.3 bits (168), Expect = 2.630e-12 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 4 AMALWDFNGERESDLSFKRGDSITVIRRYSNGWWEGELNGCIGDFPCNFVEL 159
A+AL+DF ERE DL FKRGD I ++ + +GWW G +N IG FP NFV +
Sbjct: 275 AVALYDFEKEREEDLEFKRGDIIEILEKNESGWWIGRVNDKIGTFPFNFVNI 326
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: A0A1Y3N448_PIRSE (SH3 domain-containing protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N448_PIRSE) HSP 1 Score: 63.9 bits (154), Expect = 3.490e-12 Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 10 ALWDFNGERESDLSFKRGDSITVIRRYSNGWWEGELNGCIGDFPCNFV 153
A +DFNG+ +S LSFK+GD I VI R +GWW+G NG G FP N+V
Sbjct: 7 ARFDFNGQDDSQLSFKKGDIIQVISRLDSGWWDGICNGQRGWFPSNYV 54
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: A0A1B7TJX9_9ASCO (DUF500-domain-containing protein n=1 Tax=Hanseniaspora valbyensis NRRL Y-1626 TaxID=766949 RepID=A0A1B7TJX9_9ASCO) HSP 1 Score: 68.9 bits (167), Expect = 4.480e-12 Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 1 KAMALWDFNGERESDLSFKRGDSITVIRRY--SNGWWEGELNGCIGDFPCNFVEL 159
+A AL+ F+GE E DLSF++GD+I +I++ SN WW GELNG G FP N+V++
Sbjct: 339 QARALFTFDGEEEGDLSFRKGDTINIIKKSESSNDWWTGELNGQEGIFPANYVQM 393
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Match: A0A1Y3NH74_PIRSE (SH3 domain-containing protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NH74_PIRSE) HSP 1 Score: 63.5 bits (153), Expect = 4.530e-12 Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 10 ALWDFNGERESDLSFKRGDSITVIRRYSNGWWEGELNGCIGDFPCNFVEL 159
AL+DF+ ++ +DL FKRGD IT+I+ N WW G L+G GDFP N+V++
Sbjct: 1 ALYDFDAQQPTDLGFKRGDIITLIKSDGN-WWRGTLDGQTGDFPSNYVQM 49 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111609.2410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111609.2410.1 >prot_M-pyrifera_M_contig111609.2410.1 ID=prot_M-pyrifera_M_contig111609.2410.1|Name=mRNA_M-pyrifera_M_contig111609.2410.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp MALWDFNGERESDLSFKRGDSITVIRRYSNGWWEGELNGCIGDFPCNFVEback to top mRNA from alignment at M-pyrifera_M_contig111609:374..577+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111609.2410.1 ID=mRNA_M-pyrifera_M_contig111609.2410.1|Name=mRNA_M-pyrifera_M_contig111609.2410.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig111609:374..577+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111609:374..577+ >mRNA_M-pyrifera_M_contig111609.2410.1 ID=mRNA_M-pyrifera_M_contig111609.2410.1|Name=mRNA_M-pyrifera_M_contig111609.2410.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig111609:374..577+ (Macrocystis pyrifera P11B4 male)back to top |