mRNA_M-pyrifera_M_contig111456.2378.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S1CAZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAZ4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.120e-12 Identity = 47/129 (36.43%), Postives = 66/129 (51.16%), Query Frame = 1
Query: 1 ESHPFYCSLCMCHFSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEA-QCPHCMRKPLRLIPATDAGAVRRYSETPASAAARHQARM---VAASSWSPLRVGDSFETMQRKMLRFD 375
+ + F+C LCM H A SCC + VC C + L G A + ++ + S +A A CPHC P L P + R Y ++ + A +H RM VA SPL+ DS+E +QRKMLRF+
Sbjct: 87 DIYKFFCPLCMFHLKEIHATSCCGNYVCASCGVQFLRGRAGL--PADLIDIPSHPIADAAVPCPHCNSSPWALAPVALDASARVYDDSGDAIARKHSQRMEQLVAERGHSPLKATDSYEALQRKMLRFE 213
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S4J7V2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4J7V2_GUITH) HSP 1 Score: 67.8 bits (164), Expect = 3.300e-11 Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 1
Query: 1 ESHPFYCSLCMCHFSAAFAASCCAHCVCLECANELLSGT-AVRCDTSTVLRLDSAAVAHEAQCPHCMRKPLRLIPATDAGAVRRYSETPASAAARHQ--ARM--VAASSWSPLRVGDSFETMQRKMLRFD 375
+ H F+C +CM + CC+H +C +CA E+L A R D D + + E CP+C ++ LRL + VR Y ++P H+ ARM + +S+ SPLRVGD + M +KML FD
Sbjct: 64 DEHVFFCPICMFYLDRMQRTVCCSHHICQDCAREMLDRIPAFRAD------YDQSKIEREISCPYCGQENLRLSTVSKETNVRSYDDSP-----MHELNARMLEIQSSTLSPLRVGDDYNAMIKKMLTFD 182
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S1TVT2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVT2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 9.050e-11 Identity = 38/123 (30.89%), Postives = 61/123 (49.59%), Query Frame = 1
Query: 7 HPFYCSLCMCHFSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEAQCPHCMRKPLRLIPATDAGAVRRYSETPASAAARHQARMVAASSWSPLRVGDSFETMQRKMLRFD 375
+ +YC LCMCH ASCC H +C +C +++L + + D + + CPHCM+ L L + VR Y + A+ A A SP+++GDSF+ ++RKM ++
Sbjct: 126 YQYYCPLCMCHHKKILEASCCKHYMCHQCTHDMLCAKGM----DAAIHFDPGNLPVQMDCPHCMQPNLALNVVAEGNQVRTYFDEEEGEASTSTA---AKGPESPIKIGDSFDAIRRKMFTYE 241
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S2FWN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FWN0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.680e-10 Identity = 47/133 (35.34%), Postives = 65/133 (48.87%), Query Frame = 1
Query: 1 ESHPFYCSLCMCHFSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEAQCPHCM--RKPLRLIPATDAGAVRRYSETPASAAA------RHQARMVAASSWSPLRVGDSFETMQRKMLRFD 375
++H F+C LCM F A FA +CC + C EC LSG D L A++ CPHC R L+L P + R Y + P + A + + + SPL+VGDS+E + RKML+FD
Sbjct: 100 DAHRFFCPLCMGWFKATFATTCCGNYCCSECTMAYLSGREGLADP---LHRLPASLPGGVPCPHCATDRPGLQLRPVSVTAEARAYEDEPVAVAVVGGSGVGNTPSVRREDAPSPLKVGDSYEALMRKMLKFD 229
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A7S0V3N1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V3N1_9CRYP) HSP 1 Score: 53.5 bits (127), Expect = 7.250e-6 Identity = 45/148 (30.41%), Postives = 65/148 (43.92%), Query Frame = 1
Query: 1 ESHP---FYCSLCMCHFSAAFAASCCAHCVCLECANEL--------LSGTAVRCDTSTVLRLDSAAVAHEAQCPHCMRKPL---RLIPATDAGAVRRYSETPA------SAAARHQARMVAASSW---SPLRVGDSFETMQRKMLRFD 375
ES P YC +CM +++ + CC H +C C E+ LSG D ++V CPHC + L R+ A G RRY ++P S AR + + SPL++GD++E M +KML FD
Sbjct: 108 ESTPQYCLYCPICMYYYAETYRTKCCGHHICANCTAEMVWRSHRYELSGEPSEEDIASV------------SCPHCSAEALHVSRIAVADSGGDYRRYEDSPGFNKTGGSRRARTGGTVPSGPGSVAPSPLKIGDTYENMMKKMLTFD 243
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Match: A0A6U4TS67_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4TS67_HEMAN) HSP 1 Score: 52.8 bits (125), Expect = 1.770e-5 Identity = 43/141 (30.50%), Postives = 67/141 (47.52%), Query Frame = 1
Query: 1 ESHP---FYCSLCMCHFSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEAQCPHCMRKPLRL--IPATDAGA-VRRYSETPA--SAAARHQARMV--------AASSWSPLRVGDSFETMQRKMLRFD 375
ES P YC +CM +++ + CC H +C C E++ R + S L + A CPHC + L++ I D G RRY ++P H+ R A+ + SPL++GD++E M +KML +D
Sbjct: 108 ESTPQYRLYCPICMYYYAETYRTRCCNHHICANCTTEMVWRNH-RANNSVELTDEEIA---SMACPHCSSEALKVNRITVLDGGGDYRRYEDSPGFNKTGGAHRPRTGTTPIGTGGASVAPSPLKIGDTYENMMKKMLTYD 244 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111456.2378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111456.2378.1 >prot_M-pyrifera_M_contig111456.2378.1 ID=prot_M-pyrifera_M_contig111456.2378.1|Name=mRNA_M-pyrifera_M_contig111456.2378.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp MCHFSAAFAASCCAHCVCLECANELLSGTAVRCDTSTVLRLDSAAVAHEAback to top mRNA from alignment at M-pyrifera_M_contig111456:32..476- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111456.2378.1 ID=mRNA_M-pyrifera_M_contig111456.2378.1|Name=mRNA_M-pyrifera_M_contig111456.2378.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=445bp|location=Sequence derived from alignment at M-pyrifera_M_contig111456:32..476- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111456:32..476- >mRNA_M-pyrifera_M_contig111456.2378.1 ID=mRNA_M-pyrifera_M_contig111456.2378.1|Name=mRNA_M-pyrifera_M_contig111456.2378.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig111456:32..476- (Macrocystis pyrifera P11B4 male)back to top |