mRNA_M-pyrifera_M_contig111443.2375.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: A0A7S4HUH9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HUH9_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 1.170e-16 Identity = 48/130 (36.92%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 37 IHDVACALKQYVNMQDVPLCTFEEYDNFIAVASEKVADVSTEQVAR---LKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPMEFTAEYVFNVGKQCQLVEIMIAHADAL 417
+H VA ALK Y+ +V + + Y+ F+AV ++TE+ AR +K +LA+LP H ++ + + +L ++SS+ + M NCGI+FGPV FRP+ F Y+ NV +Q Q VE ++ H D L
Sbjct: 102 VHTVATALKGYLTSSEVSVVPPKLYEVFLAV-------MNTEEDARVVYMKNLLAQLPENHYNVLKLLLSYLLVISSNHE--VNKMTLDNCGIIFGPVLFRPVVFDTSYILNVPRQSQTVEFLLQHFDEL 222
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: A0A0L8HP92_OCTBM (Rho-GAP domain-containing protein n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8HP92_OCTBM) HSP 1 Score: 80.1 bits (196), Expect = 1.370e-14 Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 1 ADRSMVPMDPEAIHDVACALKQYVNMQDVPLCTFEEYDNFIAVASE-KVADVSTEQVA-RLKEVLARLPPLHCRIMHMCVRFLQMVS--SDEHRHLTCMNRTNCGIVFGPVFFRPMEFTA-EYVFNVGKQCQLVEIMIAHADALFG 423
AD V ++ + + + LK Y+ PL TF+ Y FI A E +S E++ +LKE++ +LPP + + + + LQ VS SDE++ MN +N GIVFGP RP E T + + Q VE++I HAD LFG
Sbjct: 676 ADPDGVDLEQQHPNVITSVLKMYLRQLPEPLLTFDAYGGFIQTAKEINAGTISGEKIIEKLKELIGQLPPANSKTTSLLISHLQQVSTESDENQ----MNASNLGIVFGPTLLRPYEGTPLSSLVDTYYQTMSVELLIKHADELFG 817
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: UPI0015ABD389 (GEM-interacting protein isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015ABD389) HSP 1 Score: 74.3 bits (181), Expect = 1.430e-12 Identity = 50/143 (34.97%), Postives = 67/143 (46.85%), Query Frame = 1
Query: 40 HDVACALKQYVNMQDVPLCTFEEYDNFIAVA------SEKVADVSTEQVAR-----LKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPM---EFTAEYVFNVGKQCQLVEIMIAHADALFGP 426
HDV LK + PL TF+ Y +FI V +EK T + L+E+L RLPP + +H V L VS + + M+ N GIVFGP RP+ + + + Q QLVE +I H ALFGP
Sbjct: 713 HDVTSVLKHFFKELPEPLLTFDLYHDFITVGKNIQRLAEKEPSAQTPGIVEDITLSLRELLRRLPPYNYSTLHHMVTHLHRVSENYEENK--MSVGNLGIVFGPTLLRPLVSGDMSMSTLLETSYQAQLVEFLITHHSALFGP 853
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: UPI0015AF83E2 (rho GTPase-activating protein 45-like isoform X1 n=3 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AF83E2) HSP 1 Score: 73.6 bits (179), Expect = 2.660e-12 Identity = 50/152 (32.89%), Postives = 80/152 (52.63%), Query Frame = 1
Query: 22 MDPEAIHD--VACALKQYVNMQDVPLCTFEEYDNFIAVASEKVADVSTEQVAR------LKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPMEFTAEY--VFNVGKQCQLVEIMIAHADALFGPAAKETAT 447
+D + +H V+ LK Y+ PL T+ Y +FI VA + A S + +A L++++ RLPP+H + + LQ VS +H M +N GIVFGP R E +A + + Q +++E++I HAD +FG +AK A+
Sbjct: 568 VDLDGVHPNVVSNVLKLYLRQLPEPLLTYRLYPDFIKVAKDYPAQKSDDNLATVGAVEDLRKLVQRLPPVHLSTLACLMHHLQKVS--QHSDHNNMPPSNLGIVFGPTLLRTSEGSASLSSLVDTVHQTRVIELLILHADEIFGASAKSPAS 717
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: UPI001C892233 (LOW QUALITY PROTEIN: GEM-interacting protein n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C892233) HSP 1 Score: 71.6 bits (174), Expect = 1.230e-11 Identity = 47/148 (31.76%), Postives = 73/148 (49.32%), Query Frame = 1
Query: 40 HDVACALKQYVNMQDVPLCTFEEYDNFIAVASE-----------KVADVSTEQVARLKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPM---EFTAEYVFNVGKQCQLVEIMIAHADALFGPAAKET 441
HD++ LK + PL TF+ Y++FI V E + A + T VA+LKE++ RLP + + + L V+ EH M+ N GIVFGP RP+ + + + Q LVE MI++ + +FGPA + +
Sbjct: 652 HDISSVLKHFFKELPEPLLTFDLYNDFIGVGKEIQRLSEKDHASETAGIVTSTVAKLKELIGRLPLCNYNAVQHMMAHLNRVA--EHYEDNKMSPGNLGIVFGPTLLRPLVSGDVSMIALLETSYQALLVEFMISNYEHIFGPATRSS 797
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: A0A0P5C4R7_9CRUS (Minor histocompatibility protein HA-1 n=3 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5C4R7_9CRUS) HSP 1 Score: 63.5 bits (153), Expect = 8.190e-9 Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = 1
Query: 46 VACALKQYVNMQDVPLCTFEEYDNFIAVASEKV---ADVSTEQVARLKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPMEFTAEY--VFNVGKQCQLVEIMIAHADALFGPAAKETATATPA 459
VA LK Y+ L T Y +FI +A E AD S + LKE++ +LP H + + L+ V++++ + M +N GIVFGP R E +A + + Q +++E++I HAD +FGP T+ T A
Sbjct: 927 VANVLKLYLRQLPEALLTSRLYPDFIRIAREWTSPSADSSAPGLEELKELVHKLPRHHYATLAFLMHHLKRVAAEQESNN--MPASNLGIVFGPTLLRTSEGSATLSSLVDTVHQTKVIELLIEHADTIFGPPDPTTSLMTTA 1067
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: UPI001EE0B757 (rho GTPase-activating protein 45-like isoform X1 n=22 Tax=Daphnia TaxID=6668 RepID=UPI001EE0B757) HSP 1 Score: 61.6 bits (148), Expect = 3.840e-8 Identity = 45/132 (34.09%), Postives = 65/132 (49.24%), Query Frame = 1
Query: 46 VACALKQYVNMQDVPLCTFEEYDNFIAVASEKV---ADVSTEQVARLKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPMEFTAEY--VFNVGKQCQLVEIMIAHADALFGP 426
VA LK Y+ L T Y +FI VA E AD S V L E++ +LP H + + L+ VS + + M +N GIVFGP R E +A + + Q +++E++I HAD +FGP
Sbjct: 998 VANVLKLYLRQLPEALLTSRLYPDFIRVAREWTGPSADTSAPGVEELNELVHKLPRHHYATLAFLMHHLKRVSGECESNN--MPASNLGIVFGPTLLRTSEGSATLSSLVDTVHQTKVIELLIEHADIIFGP 1127
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: A0A8J2S651_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2S651_9CRUS) HSP 1 Score: 60.8 bits (146), Expect = 7.110e-8 Identity = 43/132 (32.58%), Postives = 66/132 (50.00%), Query Frame = 1
Query: 46 VACALKQYVNMQDVPLCTFEEYDNFIAVASEKV---ADVSTEQVARLKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPMEFTAEY--VFNVGKQCQLVEIMIAHADALFGP 426
VA LK Y+ L T Y +FI VA E AD S + L E++ +LP H + + L+ VS++ + M +N GIVFGP R E +A + + Q +++E++I HA+ +FGP
Sbjct: 990 VANVLKLYLRQLPEALLTSRLYPDFIRVAREWTSPSADTSAPGLEELNELVHKLPRHHYATLAFLMHHLKRVSAEYESNN--MPASNLGIVFGPTLLRTSEGSASLSSLVDTVHQTKVIELLIEHAETIFGP 1119
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: A0A1S3FEB2_DIPOR (rho GTPase-activating protein 31 n=3 Tax=Dipodomys TaxID=10016 RepID=A0A1S3FEB2_DIPOR) HSP 1 Score: 55.5 bits (132), Expect = 5.210e-6 Identity = 42/135 (31.11%), Postives = 62/135 (45.93%), Query Frame = 1
Query: 37 IHDVACALKQYVNMQDVPLCTFEEYDNFIAVASEKVADVSTE-QVARLKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPMEFTAE------YVFNVGKQCQLVEIMIAHADALF 420
IH V K Y PL T+E YD F +E V+ E Q+AR++ V+ +LPP H R + +R L ++S R T M+ N +V+ P R E A V Q ++E ++ H D +F
Sbjct: 88 IHCVGSLCKLYFRELPNPLLTYELYDKF----TEAVSHCQEEGQLARIQNVIQKLPPSHYRTLEYLIRHLTHIASFSSR--TNMHARNLALVWAPNLLRSKEIEASGCSGDAAFLAVRVQQVVIEFILNHVDQIF 216
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Match: UPI0020198C39 (rho GTPase-activating protein 31 n=1 Tax=Perognathus longimembris pacificus TaxID=214514 RepID=UPI0020198C39) HSP 1 Score: 54.3 bits (129), Expect = 1.310e-5 Identity = 41/135 (30.37%), Postives = 62/135 (45.93%), Query Frame = 1
Query: 37 IHDVACALKQYVNMQDVPLCTFEEYDNFIAVASEKVADVSTE-QVARLKEVLARLPPLHCRIMHMCVRFLQMVSSDEHRHLTCMNRTNCGIVFGPVFFRPMEFTAE------YVFNVGKQCQLVEIMIAHADALF 420
IH V K Y PL T+E YD F +E V+ E Q+AR++ V+ +LPP H R + +R L ++S + T M+ N +V+ P R E A V Q ++E ++ H D +F
Sbjct: 88 IHCVGSLCKLYFRELPNPLLTYELYDKF----TEAVSHCQEEGQLARIQNVIQKLPPSHYRTLEYLIRHLTHIASFSSK--TNMHARNLALVWAPNLLRSKEIEASGCSGDAAFLAVRVQQVVIEFILNHVDQIF 216 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111443.2375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111443.2375.1 >prot_M-pyrifera_M_contig111443.2375.1 ID=prot_M-pyrifera_M_contig111443.2375.1|Name=mRNA_M-pyrifera_M_contig111443.2375.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp MVPMDPEAIHDVACALKQYVNMQDVPLCTFEEYDNFIAVASEKVADVSTEback to top mRNA from alignment at M-pyrifera_M_contig111443:64..522- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111443.2375.1 ID=mRNA_M-pyrifera_M_contig111443.2375.1|Name=mRNA_M-pyrifera_M_contig111443.2375.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig111443:64..522- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111443:64..522- >mRNA_M-pyrifera_M_contig111443.2375.1 ID=mRNA_M-pyrifera_M_contig111443.2375.1|Name=mRNA_M-pyrifera_M_contig111443.2375.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig111443:64..522- (Macrocystis pyrifera P11B4 male)back to top |