mRNA_M-pyrifera_M_contig111252.2351.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A2E9VWC7_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E9VWC7_9PLAN) HSP 1 Score: 78.6 bits (192), Expect = 4.920e-18 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 1
Query: 1 PTVSIPELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLRE 156
P + E+RKQISIFVP+SDWK IR EAA+ RIPMTELCR+WM P L RL+E
Sbjct: 3 PEIQRSEMRKQISIFVPMSDWKKIRHEAARNRIPMTELCRRWMRPELERLQE 54
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: UPI001423DBE7 (hypothetical protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001423DBE7) HSP 1 Score: 77.0 bits (188), Expect = 1.950e-17 Identity = 35/49 (71.43%), Postives = 44/49 (89.80%), Query Frame = 1
Query: 7 VSIPELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLR 153
+S E+RKQ+SIF+PLSDWKAIR EAA+QRIPM+ELCR+WM+P + RLR
Sbjct: 1 MSTREIRKQVSIFMPLSDWKAIRFEAARQRIPMSELCRRWMNPDMERLR 49
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A3B1DGT6_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DGT6_9ZZZZ) HSP 1 Score: 76.6 bits (187), Expect = 2.990e-17 Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 1
Query: 22 LRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLREQ 159
LRKQISIF+PLSDWKAIR EAA+ +IPMTELCR+WM P LT+L+++
Sbjct: 6 LRKQISIFIPLSDWKAIRMEAARMKIPMTELCRRWMKPKLTKLKKK 51
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A5C5XL68_9PLAN (Uncharacterized protein n=1 Tax=Rubinisphaera italica TaxID=2527969 RepID=A0A5C5XL68_9PLAN) HSP 1 Score: 75.9 bits (185), Expect = 6.050e-17 Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 1
Query: 19 ELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLRE 156
E+RKQISIFVP+SDWK IR EAA+ RIPMTELCR+WM P + RL+E
Sbjct: 9 EMRKQISIFVPMSDWKKIRHEAARNRIPMTELCRRWMRPEIERLQE 54
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A3E0Q470_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q470_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 1.650e-16 Identity = 33/50 (66.00%), Postives = 43/50 (86.00%), Query Frame = 1
Query: 19 ELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLREQTTQ 168
E+RKQISIFVP+SDW+ IRQEAA++RIP+TELCR+WM P + LR++ Q
Sbjct: 5 EIRKQISIFVPISDWRVIRQEAARRRIPITELCRRWMRPEIAVLRKKAEQ 54
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A517ZE90_9PLAN (Uncharacterized protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZE90_9PLAN) HSP 1 Score: 72.4 bits (176), Expect = 1.360e-15 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 19 ELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLREQTTQRA 174
E+RKQIS F+PLSDWKA+R EAA+QR+P+T LCR+W+ P L R+R Q A
Sbjct: 5 EVRKQISFFLPLSDWKALRDEAARQRVPITALCRRWIDPELVRIRSSAPQSA 56
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A5C6BU33_9PLAN (Uncharacterized protein n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A5C6BU33_9PLAN) HSP 1 Score: 71.6 bits (174), Expect = 2.540e-15 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 1
Query: 19 ELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLREQT 162
ELRKQIS+FVPLS WKAIRQEAA++ IPMTELCR+WM L L +Q+
Sbjct: 5 ELRKQISLFVPLSHWKAIRQEAARRNIPMTELCRRWMKSELAALLDQS 52
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A518CI56_9PLAN (Uncharacterized protein n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CI56_9PLAN) HSP 1 Score: 69.7 bits (169), Expect = 1.660e-14 Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 16 PELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLREQ 159
P RKQISIF+P+ DWK +R EAA+ IPMTELCR+W+ P L RL EQ
Sbjct: 4 PPRRKQISIFMPVEDWKEMRMEAARHHIPMTELCRRWLRPELDRLHEQ 51
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A5C5X7H6_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X7H6_9PLAN) HSP 1 Score: 68.9 bits (167), Expect = 2.970e-14 Identity = 29/49 (59.18%), Postives = 43/49 (87.76%), Query Frame = 1
Query: 19 ELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLREQTT 165
ELRKQISIF+P+SDW+ +RQ AA+++IP+TELCR+W+ P L +L+ +T+
Sbjct: 6 ELRKQISIFLPISDWRLLRQAAAERQIPITELCREWIRPGLEQLQFETS 54
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Match: A0A1I3K030_9PLAN (Uncharacterized protein n=2 Tax=Planctomicrobium piriforme TaxID=1576369 RepID=A0A1I3K030_9PLAN) HSP 1 Score: 69.7 bits (169), Expect = 4.850e-14 Identity = 29/49 (59.18%), Postives = 43/49 (87.76%), Query Frame = 1
Query: 19 ELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLREQTT 165
EL+KQISIF+P+SDW+A+RQEAA+Q++P+TELCR+W+ P +++L T
Sbjct: 44 ELKKQISIFLPVSDWRALRQEAARQQVPITELCRRWIVPEISKLPSPVT 92 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111252.2351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111252.2351.1 >prot_M-pyrifera_M_contig111252.2351.1 ID=prot_M-pyrifera_M_contig111252.2351.1|Name=mRNA_M-pyrifera_M_contig111252.2351.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=60bp PTVSIPELRKQISIFVPLSDWKAIRQEAAQQRIPMTELCRQWMHPSLTRLback to top mRNA from alignment at M-pyrifera_M_contig111252:241..420+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111252.2351.1 ID=mRNA_M-pyrifera_M_contig111252.2351.1|Name=mRNA_M-pyrifera_M_contig111252.2351.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=180bp|location=Sequence derived from alignment at M-pyrifera_M_contig111252:241..420+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111252:241..420+ >mRNA_M-pyrifera_M_contig111252.2351.1 ID=mRNA_M-pyrifera_M_contig111252.2351.1|Name=mRNA_M-pyrifera_M_contig111252.2351.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=360bp|location=Sequence derived from alignment at M-pyrifera_M_contig111252:241..420+ (Macrocystis pyrifera P11B4 male)back to top |