mRNA_M-pyrifera_M_contig110947.2299.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: A0A067CC58_SAPPC (Fatty acid hydroxylase domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CC58_SAPPC) HSP 1 Score: 124 bits (311), Expect = 4.780e-33 Identity = 52/107 (48.60%), Postives = 74/107 (69.16%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTYMEP 321
H++HH Y +P PFDDMY+HP+E YY +L+ P ++F HW SF Y+ L+GL G+LDHSG VR+P ++YD DH++HH V+ N+GFP +D + GTY+ P
Sbjct: 131 HKVHHYYKSPRPFDDMYMHPVEGMAYYWVLYGPPYVFAMHWQSFSVYMALMGLFGLLDHSGIAVRMP----LVYDTRDHELHHRRVNANYGFPFQYLDVLHGTYVAP 233
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: A0A7S1GXN0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GXN0_HEMAN) HSP 1 Score: 124 bits (312), Expect = 1.680e-32 Identity = 60/119 (50.42%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTYME---------PPRK 330
H++HH Y +P PFDD+YIHPLEA GYY IL+SP + P H F Y+ ++GL GVLDHSG VR+PG LY A DHD+HHS +VN+ FP+ ++D + GT+ PPRK
Sbjct: 186 HKLHHFYKSPEPFDDLYIHPLEAAGYYAILYSPPFALPIHALGFGFYMAIMGLCGVLDHSGVRVRVPG----LYAAEDHDLHHSKFEVNYAFPHPLMDILHGTFSGTCMGFRFPYPPRK 300
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: A0A482SNF4_9ARCH (Fatty acid hydroxylase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNF4_9ARCH) HSP 1 Score: 123 bits (308), Expect = 2.640e-32 Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTY 312
H++HH Y AP PFDDMYIHP+EA GYYCIL++P +LF H+ SF+ Y+V++G+ GV+DHSG +P +Y+ DHD HH+ +VN+ FP +D + GT+
Sbjct: 143 HKMHHQYKAPEPFDDMYIHPVEAFGYYCILYAPPFLFTMHYVSFIAYMVIMGIFGVMDHSGIKFSIPA----IYNTVDHDSHHAKFEVNYSFPFPYLDILHGTF 242
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: A0A1V9YQH7_9STRA (Sterol desaturase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQH7_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.050e-32 Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTYMEP 321
H++HH Y P PFDDMY+HP E YY +L+ P ++ P H SF+ Y+VL+G G+LDHSG VR+P +YD DHDVHH+ V N+GFP ++D + GTY+ P
Sbjct: 138 HKVHHHYKRPRPFDDMYMHPCEGMAYYWVLYGPPFVLPMHLHSFVVYMVLMGTFGLLDHSGVPVRIP----FVYDTRDHDVHHTRVTYNYGFPFQLLDVVHGTYLPP 240
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: W7TYR2_9STRA (C-4 sterol methyl oxidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYR2_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.880e-32 Identity = 61/104 (58.65%), Postives = 70/104 (67.31%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTY 312
H+ HH Y AP PFDDMYI PLEA GYY IL+SPA + P H SF YL LLGL G+LDHSG VRLP +YD HD+HHS + NFGFP +D + GTY
Sbjct: 197 HKHHHFYKAPAPFDDMYIAPLEALGYYFILYSPALVLPMHVLSFAVYLTLLGLCGILDHSGIDVRLPR----VYDTRFHDIHHSYTNANFGFPFPFLDVLHGTY 296
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: A0A835YXK7_9STRA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXK7_9STRA) HSP 1 Score: 119 bits (298), Expect = 6.460e-32 Identity = 55/107 (51.40%), Postives = 74/107 (69.16%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTYMEP 321
H+ HH Y +P PFDD++IHP+E YYCILF+PA P ++F Y+ L+G+ G+ DHSG + L GP YD+A+HD+HHS V+VNFGFP DR+ GTY+ P
Sbjct: 61 HKYHHYYKSPSPFDDLFIHPVEGFLYYCILFAPAAALPLRRAAFGAYMTLMGMCGLADHSGVRIAL-GP----YDSAEHDLHHSHVNVNFGFPFAWFDRLHGTYLPP 162
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: A0A5A8E491_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E491_CAFRO) HSP 1 Score: 122 bits (305), Expect = 1.040e-31 Identity = 58/104 (55.77%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTY 312
H +HH +P PFDDM IHP+EA GYY IL+SPA+LFP H S FL Y+ ++G+ GVLDH G + LP LYD HD HH VDVNFGFP+ ID + GT+
Sbjct: 166 HHLHHFNKSPEPFDDMLIHPVEAVGYYIILYSPAFLFPMHVSVFLAYMAIMGVTGVLDHCGAVLGLP---LSLYDTRHHDHHHELVDVNFGFPSAAIDVLCGTF 266
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: A0A7S3D0N0_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D0N0_9EUKA) HSP 1 Score: 120 bits (302), Expect = 2.080e-31 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTY 312
H+ HH + +P PFDDMYIHPLEA GYY I++S +L P HW++F GY++++G+AGV+DHSG P + Y + DHD+HH +VN+ FP M +D + GT+
Sbjct: 147 HKYHHYFKSPEPFDDMYIHPLEALGYYIIMYSTPFLIPMHWTAFAGYMIVVGVAGVMDHSGIKFHFP----LFYASEDHDLHHEKYEVNYSFPFMWMDILHGTF 246
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: T0RTT2_SAPDV (Fatty acid hydroxylase domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RTT2_SAPDV) HSP 1 Score: 119 bits (298), Expect = 5.050e-31 Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTYMEP 321
H++HH Y +P PFDDMY+HP+E YY +L+ P ++F H SF Y+ L+GL G+LDHSG VR+P ++YD DH++HH V+ N+GFP D + GTY+ P
Sbjct: 138 HKVHHHYKSPRPFDDMYMHPVEGMAYYWVLYGPPYVFAMHMHSFCIYMALMGLFGLLDHSGIPVRIP----LVYDTRDHEIHHRRVNYNYGFPFQYFDFLHGTYLAP 240
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Match: L1JX35_GUITC (Sterol desaturase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JX35_GUITC) HSP 1 Score: 116 bits (290), Expect = 1.230e-29 Identity = 51/104 (49.04%), Postives = 71/104 (68.27%), Query Frame = 1
Query: 1 HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLLGLAGVLDHSGTHVRLPGPLAVLYDAADHDVHHSDVDVNFGFPNMIIDRIMGTY 312
H++HH+Y +P PFDDMYIHP+EA GYYCIL+SP ++FP H F+ Y+ ++G+ G+LDHSG G +Y+ DHD HH D NF FP + +D + GT+
Sbjct: 147 HKMHHSYKSPQPFDDMYIHPVEAVGYYCILYSPPFVFPLHVYGFVLYMAIMGVCGILDHSGIKWGFLG----IYNTEDHDKHHEHFDCNFAFPFVWMDILHGTF 246 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110947.2299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110947.2299.1 >prot_M-pyrifera_M_contig110947.2299.1 ID=prot_M-pyrifera_M_contig110947.2299.1|Name=mRNA_M-pyrifera_M_contig110947.2299.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp HRIHHAYHAPIPFDDMYIHPLEATGYYCILFSPAWLFPQHWSSFLGYLVLback to top mRNA from alignment at M-pyrifera_M_contig110947:23..594- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110947.2299.1 ID=mRNA_M-pyrifera_M_contig110947.2299.1|Name=mRNA_M-pyrifera_M_contig110947.2299.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=572bp|location=Sequence derived from alignment at M-pyrifera_M_contig110947:23..594- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110947:23..594- >mRNA_M-pyrifera_M_contig110947.2299.1 ID=mRNA_M-pyrifera_M_contig110947.2299.1|Name=mRNA_M-pyrifera_M_contig110947.2299.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig110947:23..594- (Macrocystis pyrifera P11B4 male)back to top |