mRNA_M-pyrifera_M_contig110509.2199.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: A0A1Z9RZH0_9EURY (Amidase domain-containing protein n=1 Tax=Euryarchaeota archaeon TMED255 TaxID=1986693 RepID=A0A1Z9RZH0_9EURY) HSP 1 Score: 205 bits (522), Expect = 1.240e-60 Identity = 109/198 (55.05%), Postives = 135/198 (68.18%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIAEPRPERLDARLGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLGGLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLERYRGRYYGQAKNLA 594
QGGSVRSPASWTG GMKATR +VPY G +VME+SIDYIGP+T A+NA L VIA+P +++G +R+ L+ EG+ HP S+PQVD AVR+A +LQ V +SVPAH G WGAIVSDG+ +L+L G GY S YS L+D +S W +L MP+NAQ LILLG LE+Y G YYG+AKN A
Sbjct: 191 QGGSVRSPASWTGTVGMKATRDLVPYDGAIVMESSIDYIGPITRTAAENADALXVIADPVARSFTSKIGDSCEHLRVALVQEGFDHPSSEPQVDQAVRNAGNLLQKKXVTVDSISVPAHLLGGYAWGAIVSDGFWNSLKLSGNGYXHSRNYSIDLYDGLSGWSDDLDLMPVNAQTLILLGYSLEKYXGYYYGKAKNYA 388
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: A0A6L8EJJ8_9GAMM (Amidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EJJ8_9GAMM) HSP 1 Score: 191 bits (486), Expect = 3.130e-55 Identity = 101/201 (50.25%), Postives = 136/201 (67.66%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIAEP----RPERLDARLGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLGGLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLERYRGRYYGQAKNL 591
QGGSVR PASWTG+ GMKATRGVVP++GG+ +EASI++IGP+T VADNA L V+A RP+ RL Q G++I ++ EG+ P S P VD V AA+ LGA V E+S+P H G A+WG +V+DG Q L+L G+G+N YS + AM +W +MPINA +++LLG++LE+Y GRYY ++KNL
Sbjct: 192 QGGSVRIPASWTGVVGMKATRGVVPFSGGVPIEASIEHIGPLTDTVADNARYLEVMAGSGEGDRPD-YTGRLEQGAAGLKIAVVKEGFGWPSSAPAVDRGVSAAASHFASLGATVEEISIPDHLTGPAVWGGVVTDGLWQTLKLNGVGFNHDDVYSPAMSAAMRNWTLRKSDMPINAALILLLGRYLEKYEGRYYARSKNL 391
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: A0A6L8EJK2_9GAMM (Amidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EJK2_9GAMM) HSP 1 Score: 189 bits (479), Expect = 3.810e-54 Identity = 102/206 (49.51%), Postives = 131/206 (63.59%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIA----------EPRPERLDARLGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLGGLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLERYRGRYYGQAKN 588
Q GSVR P+S+ G GMKAT G++PY G M MEA +D +GPMTA V DNA +L V+A + R LG+ + G++I ++ EG+ HPLS+P VD V AA GLGAEVSEVS+P H DG+++WGAI+SDG LR GL NT+G S L MS W +L P+N +++LLGKHLERY G YY +AKN
Sbjct: 192 QAGSVRIPSSFCGAYGMKATFGLLPYTGIMGMEAMLDNVGPMTANVGDNALMLEVLAGYDGMDSRQRQLRVHNYTEALGKDMTGMKIAVVREGFDHPLSEPDVDRCVLAAADRFAGLGAEVSEVSIPMHRDGVSLWGAIISDGLWDTLRSNGLAMNTNGFNSPALEKYMSGWQDKLAQFPVNLHMVLLLGKHLERYAGGYYARAKN 397
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: A0A1G0K7Z6_9GAMM (Amidase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K7Z6_9GAMM) HSP 1 Score: 188 bits (477), Expect = 7.500e-54 Identity = 103/209 (49.28%), Postives = 131/209 (62.68%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIAEPRPERLDAR------------LGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLGGLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLERYRGRYYGQAKNL 591
Q GS+R P+SW G GMK T G+VPY G + ME +DY+GP+TA VADNA LL VIA P ++LD R L + G+RIG+L EG+ HPLS+ VD VR AA L LGA V +VSVP H DG+A+W ++SD Q + + G NT G +S AM +W +L P NA +L+LLGK+LERYRGRY +AKNL
Sbjct: 192 QAGSIRIPSSWCGAVGMKPTHGLVPYTGILGMEGMLDYVGPITANVADNALLLQVIAGP--DQLDYRQRNVQVRPYAEALHARIAGLRIGILREGFGHPLSEADVDECVRAAAERLAALGATVRDVSVPMHTDGVAVWAGVISDALWQTMWMNGTPLNTDGVFSPAFGRAMEAWDRQLGRFPPNALMLLLLGKYLERYRGRYTAKAKNL 398
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: A0A2D6ITK9_9GAMM (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2D6ITK9_9GAMM) HSP 1 Score: 176 bits (446), Expect = 2.450e-49 Identity = 89/207 (43.00%), Postives = 136/207 (65.70%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIA-----EPRPERLDAR-----LGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLGGLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLERYRGRYYGQAKNL 591
Q GSVR PASW+G GMKAT G+VP+ G +EA++D++GP+TA VADNA LL V+A + R +L + LG+P+ G+RIG++ EG+ HP S V+ VR AAA + LGA++SE+S+P H G+AIW ++ + +L+ GG +N G YS DAM W + + +P+N +++L G++++R+ G+YY +A+NL
Sbjct: 192 QAGSVRIPASWSGAVGMKATHGLVPFTGVAGLEATMDHVGPITANVADNALLLEVLAGTDGLDSRQRQLSVQPYGESLGKPVTGMRIGVVREGFEHPHSSSTVNECVRTAAARFKELGADISEISIPMHFPGIAIWSGLLMEPVWHSLQTGGAQFNADGLYSPAFVDAMQDWQSRVEQVPVNLLMVMLFGQYMQRFGGQYYARARNL 398
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: A0A3N5G3B7_9BURK (Amidase (Fragment) n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3N5G3B7_9BURK) HSP 1 Score: 177 bits (449), Expect = 8.670e-49 Identity = 100/210 (47.62%), Postives = 136/210 (64.76%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIA-----EPRP-----ERLDARLGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLG-GLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLER-YRGRYYGQAKNLA 594
QGGS+R P+ W GI GMKAT G+VPY G M +EA+ID++GPMTA VADNA LL VIA +PR ++ LG+ + G+RIG+LTEG+ H +S+P VD VR+A+ L+ LGA V EVSV H DG AIW AI +G + G G+G+N G Y+T L DA S+W A + ++ + +G++ R YRG +Y +A+NLA
Sbjct: 405 QGGSIRMPSGWCGIYGMKATHGLVPYTGVMPIEATIDHVGPMTATVADNALLLEVIAGTDGLDPRQYNVRVDKYTTALGRGVAGMRIGVLTEGFGHEVSEPDVDQKVREASGRLRSLGATVEEVSVAWHRDGPAIWTAIALEGLQAQMMYGNGMGFNWEGLYTTSLLDAHSNWRARANELSRTLKISMFVGEYFIRHYRGHFYAKAQNLA 614
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: A0A523MJF6_9GAMM (Amidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MJF6_9GAMM) HSP 1 Score: 174 bits (441), Expect = 2.910e-48 Identity = 90/207 (43.48%), Postives = 131/207 (63.29%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIA----------EPRPERLDARLGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLGGLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLERYRGRYYGQAKNL 591
Q GSVR PASW+G GMKAT G+VPY G +EA++D++GP+T VADNA LL V+A +P + L +P+ G++IG+L EG+ HP S V+ VR AAA LGAEVSE+S+P H G+AIW ++ + AL+ GG+ +N YS DAM W + ++P+N +++L G+++ER+ G+YY +A+NL
Sbjct: 238 QAGSVRIPASWSGAVGMKATHGLVPYTGVAGLEATMDHVGPITTTVADNALLLEVLAGGDDLDHVGRQPIVQSYTRCLDEPVTGMKIGVLREGFEHPHSSSVVNECVRAAAARFTELGAEVSEISIPMHFPGIAIWSGLIMEPAWHALQTGGVQFNADAVYSPAFVDAMQDWQSRAEHVPVNLLMVMLFGRYMERFGGQYYARARNL 444
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: G9AIT8_RHIFH (Putative amidase n=1 Tax=Rhizobium fredii (strain HH103) TaxID=1117943 RepID=G9AIT8_RHIFH) HSP 1 Score: 172 bits (435), Expect = 1.110e-47 Identity = 98/210 (46.67%), Postives = 132/210 (62.86%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIAEP-----------RPERLDARLGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLG-GLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLERY-RGRYYGQAKNL 591
QGGS+R+PAS+ GI G+K T G+VPY G M +E +ID++GPMT VADNA +L VIA P + +R LGQ G++IG+L EG+ HP S+P VD +VRDAA + LGAEV EVSVP HH G AIW + +G ++ L G G G+N G Y T + DA S+W +P + + +L G+ + R RGRYY +A+NL
Sbjct: 192 QGGSIRTPASYCGIVGLKPTWGLVPYTGAMPIELTIDHLGPMTRTVADNALMLEVIAGPDGLDPRQTALVKAQRYTRALGQSCAGLKIGVLKEGFGHPNSEPDVDQSVRDAANRFRDLGAEVEEVSVPMHHAGPAIWLVVAFEGATEQLMKGNGHGFNWKGLYVTSMIDAHSAWRQRADELPDSVKQTMLTGEWMIRTGRGRYYAKAQNL 401
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: UPI0003B6950F (amidase n=1 Tax=Nevskia ramosa TaxID=64002 RepID=UPI0003B6950F) HSP 1 Score: 166 bits (421), Expect = 1.410e-45 Identity = 96/209 (45.93%), Postives = 130/209 (62.20%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIAEPR---PERLDARLGQPLG-------GVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLG-GLGYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKH-LERYRGRYYGQAKNL 591
QGGS+R P+SW G GMKAT G+VPY+G M +EA++D+IGP+TA VADNA LL+VIA P +++ R G LG G+RIG++ EG+ H S+ VDAAVR AAA LGA V EVS+P H G+ IW +I +G + + G G G+N G Y T L A +W + ++ IL G H L++YRG +Y +A+NL
Sbjct: 190 QGGSIRMPSSWCGTVGMKATHGLVPYSGIMAIEATLDHIGPITATVADNALLLDVIAGSDGLDPRQIEVRRGDYLGALNQSVKGMRIGVVREGFGHANSEADVDAAVRKAAAQFGALGATVEEVSIPMHTVGMIIWSSIAHEGATTQMMHGNGFGFNWKGLYVTSLQRAHDAWRQRADELSDTVKLTILFGHHVLKKYRGHHYAKAQNL 398
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Match: A0A5R8ZQX3_9PSED (Amidase n=2 Tax=Pseudomonas TaxID=286 RepID=A0A5R8ZQX3_9PSED) HSP 1 Score: 166 bits (420), Expect = 1.750e-45 Identity = 95/213 (44.60%), Postives = 136/213 (63.85%), Query Frame = 1
Query: 1 QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAALLNVIAEPRPERLDAR-------------LGQPLGGVRIGLLTEGYAHPLSDPQVDAAVRDAAAVLQGLGAEVSEVSVPAHHDGLAIWGAIVSDGYSQALRLGGL-GYNTSGPYSTRLHDAMSSWPAELPNMPINAQVLILLGKHLER-YRGRYYGQAKNLA 594
QGGSVR PA++ G+ GMK T G+VPY G M +E+++D++GP+TA V DNA +L V+A P + LD R LG+ + G+RIG+L EG+AH S+P VD AVR+ A V + LGA V EVS+PAH G AIW AI ++G S+ + G G+N G Y T + + + W ++P + +LG+++ R YRGR+YG+A+NLA
Sbjct: 192 QGGSVRIPAAYCGVYGMKPTHGLVPYTGAMPIESTLDHLGPITASVRDNALMLEVLAGP--DGLDPRQNALAPAGGYLEALGRGVVGMRIGVLREGFAHANSEPVVDEAVRNTADVFRALGATVEEVSLPAHSQGPAIWLAIAAEGASEQMMKGNSHGFNWRGLYLTGMMEHHARWRERADDLPDTVKTTFILGEYVNRNYRGRFYGKAQNLA 402 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110509.2199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110509.2199.1 >prot_M-pyrifera_M_contig110509.2199.1 ID=prot_M-pyrifera_M_contig110509.2199.1|Name=mRNA_M-pyrifera_M_contig110509.2199.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp QGGSVRSPASWTGICGMKATRGVVPYAGGMVMEASIDYIGPMTAGVADNAback to top mRNA from alignment at M-pyrifera_M_contig110509:4..597- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110509.2199.1 ID=mRNA_M-pyrifera_M_contig110509.2199.1|Name=mRNA_M-pyrifera_M_contig110509.2199.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig110509:4..597- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110509:4..597- >mRNA_M-pyrifera_M_contig110509.2199.1 ID=mRNA_M-pyrifera_M_contig110509.2199.1|Name=mRNA_M-pyrifera_M_contig110509.2199.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig110509:4..597- (Macrocystis pyrifera P11B4 male)back to top |