mRNA_M-pyrifera_M_contig110484.2191.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Match: A0A813IR15_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IR15_POLGL) HSP 1 Score: 95.5 bits (236), Expect = 3.600e-20 Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 1
Query: 31 PPYVCP-AGDVVEMDMYRFHEENDYD-IAQHNTADLMGEVQYLCTQLLGNA--DSQLSKFRVSVNTTWGQYGMC----NSGICSGGLAGTVGHESAGHFGT-PKAGQCDANEGIGNWFSLELESECASGEVVGTDGCAWQGPIEWYKTISIDCI 465
PP P + V +D+YR + D I NT D +G++ +LC G S ++ +R++ NT+WGQY C +C GG +G ES G+ P GQC N G+WFSL +C GE VGT GC W G + ++I+ C+
Sbjct: 229 PPCSDPGSSQVTTLDLYRIRSAKEPDEIQNRNTGDALGDMAFLCLTEAGKMYRGSVITHWRLTANTSWGQYAYCAYIGGKNVCEGGTDRLMGRESGLGLGSGPLQGQCSENTDCGSWFSLPAAGQCRPGETVGTSGCTWGGAVA-LRSIAASCL 381
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Match: A0A813HW72_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HW72_POLGL) HSP 1 Score: 95.5 bits (236), Expect = 4.210e-20 Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 1
Query: 31 PPYVCP-AGDVVEMDMYRFHEENDYD-IAQHNTADLMGEVQYLCTQLLGNA--DSQLSKFRVSVNTTWGQYGMC----NSGICSGGLAGTVGHESAGHFGT-PKAGQCDANEGIGNWFSLELESECASGEVVGTDGCAWQGPIEWYKTISIDCI 465
PP P + V +D+YR + D I NT D +G++ +LC G S ++ +R++ NT+WGQY C +C GG +G ES G+ P GQC N G+WFSL +C GE VGT GC W G + ++I+ C+
Sbjct: 259 PPCSDPGSSQVTTLDLYRIRSAKEPDEIQNRNTGDALGDMAFLCLTEAGKMYRGSVITHWRLTANTSWGQYAYCAYIGGKNVCEGGTDRLMGRESGLGLGSGPLQGQCSENTDCGSWFSLPAAGQCRPGETVGTSGCTWGGAVA-LRSIAASCL 411
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Match: A0A7S4NK87_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NK87_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 1.180e-19 Identity = 56/160 (35.00%), Postives = 84/160 (52.50%), Query Frame = 1
Query: 4 FTTPQLCLEPPYVCPAGDVVEMDMYRFHEENDYDIAQHNTADLMGEVQYLCTQLLGNAD---SQLSKFRVSVNTTWGQYGMCNSGICSGGLAGTVGHESAGHFG-TPKAGQCDANEG-IGNWFSLELESECASGEVVGTDG-CAWQGPIEWYKTISIDCI 465
F P +C P +CP V ++++YR+H + +A N A +G ++C +A+ S +SK+ VSV+T WG YG+CN C VG E + +G T +GQC + G W+S SEC SG VG + C+WQ + +TI IDC+
Sbjct: 97 FEIPDVCTPPGVICPGEGVQDLEVYRYHAAHLNSLADQNGASQIGVTAFICQAAGTDAEPTYSWISKYTVSVDTAWGNYGLCNLHNCWTLNPNAVGREYS--YGVTEDSGQCAPDSPTFGEWYSFTSVSECPSGVPVGPENNCSWQTK-QLLQTIDIDCL 253
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Match: A0A813JUZ1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JUZ1_POLGL) HSP 1 Score: 94.7 bits (234), Expect = 1.200e-19 Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 1
Query: 31 PPYVCP-AGDVVEMDMYRFHEENDYD-IAQHNTADLMGEVQYLCTQLLGNA--DSQLSKFRVSVNTTWGQYGMC----NSGICSGGLAGTVGHESAGHFGT-PKAGQCDANEGIGNWFSLELESECASGEVVGTDGCAWQGPIEWYKTISIDCI 465
PP P + V +++YR + D I NT D +G++ +LC + G S ++ +R++ NT+WGQY C C GG VG ES G+ P GQC N G+WFSL +C GE VGT GC W G + ++I+ C+
Sbjct: 1072 PPCSDPGSSQVTTLNLYRIRSAKEPDEIQNRNTGDALGDMAFLCGETAGQMYNGSVITHWRLTANTSWGQYAYCVYIDGENTCLGGTDRLVGRESGFGLGSGPLQGQCSENADCGSWFSLPAAGQCGPGETVGTSGCTWGGAVA-LRSIAASCL 1224
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Match: A0A813IVK3_POLGL (Hypothetical protein n=4 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IVK3_POLGL) HSP 1 Score: 92.8 bits (229), Expect = 3.190e-19 Identity = 53/154 (34.42%), Postives = 78/154 (50.65%), Query Frame = 1
Query: 31 PPYVCP-AGDVVEMDMYRFHEENDYD-IAQHNTADLMGEVQYLCTQLLGNA--DSQLSKFRVSVNTTWGQYGMC----NSGICSGGLAGTVGHESAGHFGT-PKAGQCDANEGIGNWFSLELESECASGEVVGTDGCAWQGPIEWYKTISIDCI 465
PP P + V +++YR + D I N+ D +G++ +LC + G S ++ +R++ NT+WGQY C C GG VG ES G+ P GQC N G+WFSL +C GE VGT GC W G + ++I+ C+
Sbjct: 218 PPCSDPGSSQVTTLNLYRIRSAKEPDEIQNRNSGDALGDMAFLCGETAGQMYNGSVITHWRLTANTSWGQYAYCVYVDGENTCLGGTDRLVGRESGFGLGSGPLQGQCSENADCGSWFSLPAAGQCRPGETVGTSGCTWGGAVA-LRSIAASCL 370
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Match: A0A7S2TW06_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TW06_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 8.690e-18 Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 1
Query: 13 PQLCLEPPYVC-PAGD-VVEMDMYRFHEENDYDIAQHNTADLMGEVQYLCTQLLGNADSQ-----LSKFRVSVNTTWGQYGMCNS--GICSGGLAGTVGHESAGHFGTPKAGQCDANEGIGNWFSLELESECASGEVVGTDGCAWQGPIEWYKTISIDC 462
P C E P C P + V+ MD Y H + ++I +TADL+G+ + C+ + N +S +R+SV+TTWGQY +CN G+C G VG E++ K GQC N +G W+S +C S + C W E KTI++ C
Sbjct: 183 PAYCTEKPATCAPQTERVITMDHYIAHPPDHFNITDQDTADLLGDTVFTCSDVKRNHTKDDHYGVISHYRISVDTTWGQYALCNGYPGVCVGNEDFFVGREASMGI-KEKGGQCANNSDVGTWYSFPAAGQCQSRGDLDAHKCTWFIE-ERVKTINLTC 339
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Match: A0A813H7J5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H7J5_POLGL) HSP 1 Score: 79.0 bits (193), Expect = 1.560e-15 Identity = 42/113 (37.17%), Postives = 58/113 (51.33%), Query Frame = 1
Query: 148 YLCTQLLGNA--DSQLSKFRVSVNTTWGQYGMC----NSGICSGGLAGTVGHESAGHFGT-PKAGQCDANEGIGNWFSLELESECASGEVVGTDGCAWQGPIEWYKTISIDCI 465
+LC + G S ++ +R++ NT+WGQY C C GG VG ES G+ P GQC N G+WFSL +C GE VGT GC W G + ++I+ C+
Sbjct: 3 FLCGETAGQMYKGSVITHWRLTANTSWGQYAYCVYIDGENTCLGGTDRLVGRESGFGLGSGPLQGQCSENADCGSWFSLPAAGQCGPGETVGTSGCTWGGAVA-LRSIAASCL 114
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Match: A0A7S1A9W3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9W3_NOCSC) HSP 1 Score: 73.2 bits (178), Expect = 2.380e-12 Identity = 44/127 (34.65%), Postives = 60/127 (47.24%), Query Frame = 1
Query: 109 AQHNTADLMGEVQYLCTQLLGNADSQLSKFRVSVNTTWGQYGMCN-------SGICSGGLAGTVGHESAGHF--GTPKAGQCDANEGIGNWFSLELESECASGEVVGTDGCAWQGPIEWYKTISIDC 462
A N DL G+ C + ++++ V VN+++GQY +CN +C GG VG H G GQC N G+WFS +E +C SG VGTDGC WQG + K + C
Sbjct: 184 AGQNVGDLRGQTMTACMY----SSPYIAEYEVVVNSSYGQYALCNYISNDDRGNVCVGG-GDAVGRAPWLHICHGKELCGQCTNNSDSGSWFSFPVEGQCKSGAHVGTDGCTWQGRLT--KIVDYHC 303 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110484.2191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110484.2191.1 >prot_M-pyrifera_M_contig110484.2191.1 ID=prot_M-pyrifera_M_contig110484.2191.1|Name=mRNA_M-pyrifera_M_contig110484.2191.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp VFTTPQLCLEPPYVCPAGDVVEMDMYRFHEENDYDIAQHNTADLMGEVQYback to top mRNA from alignment at M-pyrifera_M_contig110484:3..467- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110484.2191.1 ID=mRNA_M-pyrifera_M_contig110484.2191.1|Name=mRNA_M-pyrifera_M_contig110484.2191.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig110484:3..467- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110484:3..467- >mRNA_M-pyrifera_M_contig110484.2191.1 ID=mRNA_M-pyrifera_M_contig110484.2191.1|Name=mRNA_M-pyrifera_M_contig110484.2191.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig110484:3..467- (Macrocystis pyrifera P11B4 male)back to top |