mRNA_M-pyrifera_M_contig110222.2140.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: H9X0W4_PINTA (J domain-containing protein (Fragment) n=3 Tax=Pinus TaxID=3337 RepID=H9X0W4_PINTA) HSP 1 Score: 109 bits (273), Expect = 4.220e-29 Identity = 59/99 (59.60%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 7 HLLVAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
H L AGVSVAAVALAS+ + AW AF+ RP P ++ Y GGF+ M+R EAALILGVR V+ EKIK AHR++MV NHPD GGS ++A+K+NEAK+++
Sbjct: 1 HPLAAGVSVAAVALASKYAIEAWQAFKARPVVPRMRKFYEGGFQPVMTRREAALILGVRERVAMEKIKEAHRRVMVANHPDSGGSDYLASKINEAKDVM 99
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: A0A200PVG1_9MAGN (DnaJ domain n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PVG1_9MAGN) HSP 1 Score: 109 bits (273), Expect = 5.020e-29 Identity = 58/97 (59.79%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 13 LVAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
LVAGVSVAA AL R +++AW AF+ RP P +R Y GGF+ KM+R EAALILG+R + EKI+ AHR++MV NHPDRGGS ++A+K+NEAK++L
Sbjct: 9 LVAGVSVAAAALGGRYLIQAWQAFKARPVVPQMRRFYEGGFQQKMTRREAALILGIRERDALEKIRDAHRRVMVANHPDRGGSEYLASKINEAKDML 105
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: A0A803MEN4_CHEQI (J domain-containing protein n=5 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MEN4_CHEQI) HSP 1 Score: 109 bits (272), Expect = 5.990e-29 Identity = 55/100 (55.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query: 1 MSHLLVAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKRYRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
M+ L+AG++VAA ALA + ++AW AF+ RP P P K + GGF+ KM+R EAALILG+R + +AEK+K AHRK+M+ NHPD GGS ++A+K+NEAK+++
Sbjct: 1 MAAPLIAGMTVAAAALAGKYGIQAWQAFKARP-PRPRKFFEGGFQPKMTRREAALILGIRESAAAEKVKEAHRKVMIANHPDAGGSHYLASKINEAKDMM 99
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: TI141_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-1 n=11 Tax=Brassicaceae TaxID=3700 RepID=TI141_ARATH) HSP 1 Score: 109 bits (272), Expect = 6.340e-29 Identity = 57/96 (59.38%), Postives = 76/96 (79.17%), Query Frame = 1
Query: 16 VAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
+AGV+VAA ALA R ++AW AF+ RP P K+ Y GGF+ M++ EAALILGVR +V+AEK+K AHRK+MV NHPD GGS F+A+K+NEAK+++
Sbjct: 6 IAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGVRESVAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVM 101
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: A0A6A3A3G2_HIBSY (Mitochondrial import inner membrane translocase subunit TIM14-3 n=9 Tax=Malvoideae TaxID=214907 RepID=A0A6A3A3G2_HIBSY) HSP 1 Score: 108 bits (270), Expect = 1.860e-28 Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 1
Query: 13 LVAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
L+AG++VAA A A R +RAW AF+ RP +R Y GGF+ M+R EAALILGVR + SAEKIK AHR++MV NHPD GGS F+A+K+NEAK+++
Sbjct: 17 LIAGIAVAAAAYAGRYSIRAWQAFKGRPPTARVRRFYEGGFQPSMTRREAALILGVRESTSAEKIKEAHRRVMVANHPDAGGSHFLASKINEAKDMM 113
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: C5WZ38_SORBI (J domain-containing protein n=7 Tax=Panicoideae TaxID=147369 RepID=C5WZ38_SORBI) HSP 1 Score: 108 bits (269), Expect = 3.220e-28 Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 1
Query: 1 MSHLLVAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
M+ L+AG+SVAA AL R ++RAW AFQ R P +R Y GGF+ +M+R EAALILGVR + +KIK AHR++MV NHPD GGS ++A+K+NEAK++L
Sbjct: 21 MATPLIAGLSVAAAALGGRSMIRAWQAFQTRAAMPRVRRFYPGGFQGEMNRREAALILGVRERATLDKIKEAHRRVMVANHPDAGGSHYVASKINEAKDIL 121
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: A0A200QPC7_9MAGN (DnaJ domain n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QPC7_9MAGN) HSP 1 Score: 107 bits (268), Expect = 4.690e-28 Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 1
Query: 13 LVAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
LV GVSVAA AL R +++AW AF+ RP P +R Y GGF+ KM+R EAALILG+R EKI+ AHR++MV NHPDRGGS ++A+K+NEAK++L
Sbjct: 26 LVVGVSVAAAALGGRYLIQAWKAFKTRPVVPRVRRFYEGGFQQKMTRREAALILGIRERDVMEKIREAHRRVMVANHPDRGGSEYLASKINEAKDML 122
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: UPI00053C8D38 (mitochondrial import inner membrane translocase subunit TIM14-2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C8D38) HSP 1 Score: 107 bits (266), Expect = 5.180e-28 Identity = 56/97 (57.73%), Postives = 75/97 (77.32%), Query Frame = 1
Query: 13 LVAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
+VAG++VAA A A + M AW AF+ RP P +R Y GGF++ M+R EAALILGVR + +AEK+K AHR++MV NHPD GGS ++A+KVNEAK+L+
Sbjct: 5 IVAGIAVAAAAYAGKYGMEAWQAFKARPPRPRMRRFYEGGFQSTMTRREAALILGVRESTAAEKVKEAHRRVMVANHPDAGGSHYLASKVNEAKDLM 101
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: D8SC40_SELML (J domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SC40_SELML) HSP 1 Score: 107 bits (266), Expect = 5.490e-28 Identity = 55/96 (57.29%), Postives = 74/96 (77.08%), Query Frame = 1
Query: 16 VAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
+AGV++AA A+A + + AW AF+ RP P ++ Y GGF+ M+R EAALILGVR +V+ EKIK AHRK+MV NHPD GGS ++ATK+NEAK++L
Sbjct: 8 IAGVAIAAAAIAGKYGVEAWHAFRTRPAVPRLRKFYEGGFQPTMTRREAALILGVRESVAQEKIKEAHRKVMVANHPDAGGSDYLATKINEAKDVL 103
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Match: M4E2M9_BRARP (J domain-containing protein n=13 Tax=Brassicaceae TaxID=3700 RepID=M4E2M9_BRARP) HSP 1 Score: 107 bits (266), Expect = 5.650e-28 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 1
Query: 19 AGVSVAAVALASRPVMRAWVAFQNRPRPPPYKR-YRGGFEAKMSRNEAALILGVRYTVSAEKIKAAHRKLMVLNHPDRGGSPFIATKVNEAKELL 300
AGV+VAA ALA R ++AW AF+ RP P K+ Y GGF+ M++ EAALILG+R V AEK+K AHRK+MV NHPD GGS F+A+K+NEAK+++
Sbjct: 10 AGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGIRENVPAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVM 104 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110222.2140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110222.2140.1 >prot_M-pyrifera_M_contig110222.2140.1 ID=prot_M-pyrifera_M_contig110222.2140.1|Name=mRNA_M-pyrifera_M_contig110222.2140.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp MSHLLVAGVSVAAVALASRPVMRAWVAFQNRPRPPPYKRYRGGFEAKMSRback to top mRNA from alignment at M-pyrifera_M_contig110222:243..599+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110222.2140.1 ID=mRNA_M-pyrifera_M_contig110222.2140.1|Name=mRNA_M-pyrifera_M_contig110222.2140.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig110222:243..599+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110222:243..599+ >mRNA_M-pyrifera_M_contig110222.2140.1 ID=mRNA_M-pyrifera_M_contig110222.2140.1|Name=mRNA_M-pyrifera_M_contig110222.2140.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig110222:243..599+ (Macrocystis pyrifera P11B4 male)back to top |