mRNA_M-pyrifera_M_contig109690.2024.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109690.2024.1 vs. uniprot
Match: A0A847GFM7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GFM7_9BACT) HSP 1 Score: 144 bits (363), Expect = 5.300e-37 Identity = 79/183 (43.17%), Postives = 107/183 (58.47%), Query Frame = 1
Query: 1 GYNGYMKNGGEAFFGNAVEAISDVWNTVL-ARGEGVGT---SSDEALTWFLVDKIEYLLSVKKNVHDAERAQEMFSRINRNDFEAYEKVADYFYGFGGEMGTDVGLRMWETSLTASGPERRRVLGKLADHYMSEGEEVFQLAQQPNAPKDSLERAKVQFLRALEYDRNSQAAAMKVKEVQAAI 537
GY G++K GG A+F AVE ++DVWNTVL + +GV T SD ALTW+ V+++EYL+ VK N+H AER E F ++N EAY KV D FY F G+ W + GPER + KL+ HY++EG + A P A + L A F +AL+YDR S+ AA ++E AI
Sbjct: 197 GYEGFLKQGGRAYFTRAVETVADVWNTVLNSEMDGVATLVKPSDRALTWYFVNEMEYLMRVKSNMHQAERVYENFEKVNPRLVEAYVKVGDIFYNFNTAESRLRGIEEWRKAYALGGPERAGIGKKLSAHYLAEGRAFLEKAGLPGATETDLNSALNAFEQALDYDRTSETAASLIQETNLAI 379
BLAST of mRNA_M-pyrifera_M_contig109690.2024.1 vs. uniprot
Match: A0A7Y5FE64_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5FE64_9BACT) HSP 1 Score: 135 bits (340), Expect = 8.660e-34 Identity = 73/185 (39.46%), Postives = 111/185 (60.00%), Query Frame = 1
Query: 1 GYNGYMKNGGEAFFGNAVEAISDVWNTVLARGEGVGTS---SDEALTWFLVDKIEYLLSVKKNVHDAERAQEMFSRINRNDFEAYEKVADYFYGFGGEMGTDVGLRMWETSLTASGPERRRVLGKLADHYMSEGEEVFQLAQQPNAPKDSLERAKVQFLRALEYDRNSQAAAMKVKEVQAAIEDK 546
GY GY + A ++VEA++DVW TV+ R EG + SD++LT + +++ Y L KKN+ +AERA + F+ + AY+K+ D FY FGGE G D ++ W +LT GP R V+ KL+ HY++ G+ A +PNAPKDSL A F +ALE+D++++ A + E Q I ++
Sbjct: 193 GYAGYASSASPAMMQSSVEAVADVWFTVM-RPEGDSSDVKPSDKSLTAYFTEQVVYQLRTKKNLREAERAYKQFAELKTTSLAAYDKIGDAFYAFGGE-GRDRAVQEWTNALTLPGPGRNDVMKKLSQHYLNLGKAYLAAAPKPNAPKDSLPNALANFTKALEFDQSNEEAGQLINETQIQISER 375
BLAST of mRNA_M-pyrifera_M_contig109690.2024.1 vs. uniprot
Match: A0A7V2Y4V6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y4V6_9BACT) HSP 1 Score: 130 bits (327), Expect = 5.750e-32 Identity = 74/200 (37.00%), Postives = 113/200 (56.50%), Query Frame = 1
Query: 1 GYNGYMKNGGEAFFGNAVEAISDVWNTVLARGE---GVGTSSDEALTWFLVDKIEYLLSVKKNVHDAERAQEMFSRINRNDFEAYEKVADYFYGFGGEMGTDVGLRMWETSLTASGPERRRVLGKLADHYMSEGEEVFQLAQQPNAPKDSLERAKVQFLRALEYDRNSQAAAMKVKEVQAAIEDKLEQQMTMMELVSSAQ 591
GYNGY+K G F V+ +DVW T+L R E G+ T S EA+ W+LV +I+YLL KKN + A +A + F + +D A + + D FY FG E G+ W+T+ +G +RR + KL+ HY G+ + A +P A + L A F RALEY++ + A A K+ E AAI D+ ++ + +++SA+
Sbjct: 183 GYNGYLKEGAPNLFAQCVDTTADVWYTIL-RPEPDPGMATPSPEAVCWYLVREIQYLLEAKKNFYQATKAYDNFVSLGVHDAVAIDTIGDLFYAFGSEDAITRGVSEWQTAYDMAGADRRSIGKKLSAHYAKIGDAALEAAARPGASEQELPNALNAFTRALEYEQTNDAIADKITETNAAIADRKARRELNVSIIASAE 381
BLAST of mRNA_M-pyrifera_M_contig109690.2024.1 vs. uniprot
Match: A0A831XS03_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831XS03_9BACT) HSP 1 Score: 128 bits (322), Expect = 3.130e-31 Identity = 67/199 (33.67%), Postives = 117/199 (58.79%), Query Frame = 1
Query: 1 GYNGYMKNGGEAFFGNAVEAISDVWNTVLARGEGVGTSSDE--ALTWFLVDKIEYLLSVKKNVHDAERAQEMFSRINRNDFEAYEKVADYFYGFGGEMGTDVGLRMWETSLTASGPERRRVLGKLADHYMSEGEEVFQLAQQPNAPKDSLERAKVQFLRALEYDRNSQAAAMKVKEVQAAIEDKLEQQMTMMELVSSAQ 591
G+ G++ GGEA+FG A+EA++D W T+L E G S+ L+ + + ++ YLL+ K+N++ A++A E F+ N YE+V D +Y +G E + G+R W + + +GP R V KLA+HY GE F+ A P + ++ L A+ ALE++ + QA A + +V AI ++ E++ +++V++A+
Sbjct: 193 GFGGFLAKGGEAYFGRAIEAVTDAWYTMLRTEEDFGDSAPTQVVLSRYFLSEVAYLLNQKRNIYQADKAYEHFAAANPGLMNLYEEVGDLYYAYGTEAAKERGVREWRIAFSHAGPHRESVASKLANHYRRVGEAKFEHAFGPTSREEDLREAREAIQTALEFEPSRQALAQLLNDVNVAIAEREERRQLAVDIVAAAE 391
BLAST of mRNA_M-pyrifera_M_contig109690.2024.1 vs. uniprot
Match: A0A1V5YYZ8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YYZ8_9BACT) HSP 1 Score: 127 bits (320), Expect = 6.340e-31 Identity = 70/201 (34.83%), Postives = 113/201 (56.22%), Query Frame = 1
Query: 4 YNGYMKNGGEAFFGNAVEAISDVWNTVL-----ARGEGVGTSSDEALTWFLVDKIEYLLSVKKNVHDAERAQEMFSRINRNDFEAYEKVADYFYGFGGEMGTDVGLRMWETSLTASGPERRRVLGKLADHYMSEGEEVFQLAQQPNAPKDSLERAKVQFLRALEYDRNSQAAAMKVKEVQAAIEDKLEQQMTMMELVSSAQ 591
YNGY+K GG+A+F AVE ++DVWNTVL R G+ SD +L W+ V ++EYLL+VK N+ E + F ++ +A E + D Y + + G+ W+ + G +R + KL+ HYM EG + A QP+A + L AK F AL YDR+++AAA ++E AI ++ E+ ++ ++++ +
Sbjct: 198 YNGYLKQGGQAYFIRAVETVADVWNTVLQHEDTVRAFGLSRPSDRSLAWYFVQEMEYLLNVKDNMTQVEIVYKNFEKVGVGMTDAMEYIGDMLYAYPQKSVKLRGVAEWQKAFDMGGKDRLHLGSKLSAHYMQEGNDYLAHAAQPDAEETDLNNAKRAFEDALNYDRSNEAAAKLIQETDVAIRERNERLEVVLSIIATGE 398
BLAST of mRNA_M-pyrifera_M_contig109690.2024.1 vs. uniprot
Match: A0A1V6EZ64_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6EZ64_9BACT) HSP 1 Score: 123 bits (308), Expect = 3.400e-29 Identity = 69/189 (36.51%), Postives = 107/189 (56.61%), Query Frame = 1
Query: 1 GYNGYMKNGGEAFFGNAVEAISDVWNTVL-----ARGEGVGTSSDEALTWFLVDKIEYLLSVKKNVHDAERAQEMFSRINRNDFEAYEKVADYFYGFGGEMGTDVGLRMWETSLTASGPERRRVLGKLADHYMSEGEEVFQLAQQPNAPKDSLERAKVQFLRALEYDRNSQAAAMKVKEVQAAIEDKLE 552
GY+G++K GG A+F AVEA++DVW TVL A G S LTW+ V+++EYL++ K N+ E+ + F R+N EAYE++ D FY + G+ W+ + SGP R+ + KL+ HYM+EG+ + A QP A L A F AL+++R ++ AA +++ AI ++ E
Sbjct: 198 GYDGFLKQGGRAYFIRAVEAVADVWYTVLQEDAPAAGWSFPKPSPRTLTWYFVNEMEYLINEKSNMSQVEKVYDNFERVNPQLMEAYEQLGDIFYANEDAKVKERGVAEWQKAYNFSGPRRQELGKKLSSHYMNEGKFYLERAGQPIAEDTDLNTALEMFTSALDFNRLNEDAADLIQKTNVAIRERNE 386
BLAST of mRNA_M-pyrifera_M_contig109690.2024.1 vs. uniprot
Match: A0A7C3SV16_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3SV16_9BACT) HSP 1 Score: 108 bits (271), Expect = 4.030e-24 Identity = 63/201 (31.34%), Postives = 107/201 (53.23%), Query Frame = 1
Query: 1 GYNGYMKNGGEAFFGNAVEAISDVWNTVLA-RGEGVGTS--SDEALTWFLVDKIEYLLSVKKNVHDAERAQEMFSRINRNDFEAYEKVADYFYGFGGEMGTDVGLRMWETSLTAS-GPERRRVLGKLADHYMSEGEEVFQLAQQPNAPKDSLERAKVQFLRALEYDRNSQAAAMKVKEVQAAIEDKLEQQMTMMELVSSAQ 591
GYNG + G +F V ISD+W TVL EG+ S SD W+ V +IEYLL VKKN++ A++ E F++++ N EA ++ D FY +++W ++ S G R + KL ++Y EG+ F A QP ++ L A F +A+E+DR+++ ++ I+++ E + ++ ++S A+
Sbjct: 198 GYNGLLAKAGLDYFVRTVRTISDIWYTVLRPEDEGIWVSPPSDRTRAWYFVKEIEYLLDVKKNMYQADKIYENFTKLSTNPPEAVNRIGDAFYRLNDPQAKSRAVQLWRSAYVNSVGELRNSIAKKLGNYYFEEGQTKFTRAGQPGGKEEDLNDALYSFQQAIEFDRDNKQIVDMIQATYQEIKERTEYRNMLVAIISQAE 398 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109690.2024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109690.2024.1 >prot_M-pyrifera_M_contig109690.2024.1 ID=prot_M-pyrifera_M_contig109690.2024.1|Name=mRNA_M-pyrifera_M_contig109690.2024.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp MKNGGEAFFGNAVEAISDVWNTVLARGEGVGTSSDEALTWFLVDKIEYLLback to top mRNA from alignment at M-pyrifera_M_contig109690:6..602+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109690.2024.1 ID=mRNA_M-pyrifera_M_contig109690.2024.1|Name=mRNA_M-pyrifera_M_contig109690.2024.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=597bp|location=Sequence derived from alignment at M-pyrifera_M_contig109690:6..602+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109690:6..602+ >mRNA_M-pyrifera_M_contig109690.2024.1 ID=mRNA_M-pyrifera_M_contig109690.2024.1|Name=mRNA_M-pyrifera_M_contig109690.2024.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1164bp|location=Sequence derived from alignment at M-pyrifera_M_contig109690:6..602+ (Macrocystis pyrifera P11B4 male)back to top |