mRNA_M-pyrifera_M_contig10929.1940.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: D8LBP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBP7_ECTSI) HSP 1 Score: 432 bits (1112), Expect = 1.000e-144 Identity = 211/258 (81.78%), Postives = 236/258 (91.47%), Query Frame = 1
Query: 4 QPAPEWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKSQLYANMSDPTASVGQPEPDSTIYVGNLEPSVTEDDLREFFADCGDIASVR 777
+P P+WR SE+I EAL+RDKFRRNAKAREVL+GTGRVKLVYTN+HDDR WGVC GKG+NKLGKLLERVRADALAGKDTE WCA RFQLA PLDV V FAV+K G++VA+PSFEGKP++RMGKL DNEVVMAHPSVSRSHALLVVDR FGAFLVDLGASNGSF+DGRR++PYVPEP+KAGGA LTFAKSKRTY LT+VET LREAKK +LYA+MSDP AS QP+PDST+YVGNL+PSVTEDD+REFFA+CG IASVR
Sbjct: 89 KPKPDWRGSSEKIAEALVRDKFRRNAKAREVLVGTGRVKLVYTNTHDDRFWGVCTGKGENKLGKLLERVRADALAGKDTEAWCATRFQLALPLDVMVGFAVSKAGKIVADPSFEGKPVIRMGKLADNEVVMAHPSVSRSHALLVVDRCFGAFLVDLGASNGSFVDGRRLSPYVPEPIKAGGAGLTFAKSKRTYTLTQVETDLREAKKGRLYASMSDPMASAAQPDPDSTVYVGNLDPSVTEDDIREFFAECGAIASVR 346
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A835YNI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI4_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.870e-53 Identity = 113/266 (42.48%), Postives = 151/266 (56.77%), Query Frame = 1
Query: 19 WRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTF-----GAFLVDLGASNGSFLDGRRVTPYVPEPVKAG----GALLTFAKSKRTYKLTRVETGLREAKKSQLYANMSDPTASVGQPEP-----DSTIYVGNLEPSVTEDDLREFFADCGDIASV 774
WR+ SE I+EAL+RDKFRR+ K RE LLGTG L Y N H+D++WGVC GKG+NKLG+ P A ++KGG V+ P EG +V++GK+ N+V+M HPS SR HALL+V R G LVDLGA NG+F+ G R+ P+VP V A +TF S+R Y++ + LRE +K+ LYA ++ P A+ G +T+YVGNL VTE LR FA CG+IA++
Sbjct: 94 WRSRSEAIMEALVRDKFRRHDKYREQLLGTGAQLLAYVNEHNDKLWGVCDGKGENKLGEFA-----------------------LVPQCSAAPMNISKGGAVLDTPVIEGTALVQLGKVEGNDVLMEHPSTSRRHALLLVPRAGRGGQGGCLLVDLGAPNGTFVGGERLAPFVPRRVCGALGEAAATMTFGLSRREYRVASLRRDLREMQKAALYATVAAPAAAPGTAAAATTGGPNTVYVGNLSYDVTEAQLRAAFAPCGEIAAL 336
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: W7TWY4_9STRA (Rna recognition motif-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWY4_9STRA) HSP 1 Score: 179 bits (455), Expect = 7.580e-49 Identity = 104/255 (40.78%), Postives = 148/255 (58.04%), Query Frame = 1
Query: 19 WRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGK-DTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEP--SFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKSQLYANMSDPTASVGQPEPDSTIYVGNLEPSVTEDDLREFFADCGDIASV 774
W+ S ++EAL+RDKFRR+ R+ L+ TG +LVY N H+D+ WG C GKG N LG+LLERVRAD G +W F + V +D +VT+ G + E + E K IV GKL +N+V +AHPS SR HA++VV + +G LVDL A+NGSFLD RR+ P+ + +G + + S R Y T + + LY + DP + P+ +++ NL VTE+ +R+F ADCG + SV
Sbjct: 115 WKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFT-FDLAAAAKRSLALYEVLEDPL-KLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSV 367
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A4D9DEI1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEI1_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.310e-47 Identity = 106/256 (41.41%), Postives = 151/256 (58.98%), Query Frame = 1
Query: 19 WRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGK-DTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEP--SFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKS-QLYANMSDPTASVGQPEPDSTIYVGNLEPSVTEDDLREFFADCGDIASV 774
W+ S ++EAL+RDKFRR+ R+ L+ TG +LVY N H+D+ WG C GKG N LG+LLERVRAD G +W F + V +D +VT+ G + E + E K IV GKL +N+V +AHPS SR HA++VV + +G LVDL A+NGSFLD RR+ P+ + +G + + S R Y T +AK+S LY + DP + P+ +++ +L VTE+ +R+F ADCG + SV
Sbjct: 115 WKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPMPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGISEVALGTSSRRYTFTFDLAA--DAKRSLALYEVLEDPL-KLAAARPELGVFMKHLPKDVTEEMVRDFVADCGTVLSV 367
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A7S0JJA0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJA0_9EUKA) HSP 1 Score: 145 bits (365), Expect = 2.360e-36 Identity = 95/273 (34.80%), Postives = 140/273 (51.28%), Query Frame = 1
Query: 13 PEWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPL--DVAVDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKS----------QLYANMSDPTASVGQPEPDSTI-------YVGNLEPSVTEDDLREFFADCGDIASV 774
P W +++AL+RDKFRR+A RE LL + L+ TN+ + WGVC G+G N LGKLL +R + AG DT+ W F +A P + VTKGG V+ + ++ +GK + +V + HPS+SR HA ++ D G LVDL + G+ L+G+R+ P V P+K G A + F S R + L +T E K+ QL A+ D ++ G P + +VGNL T++ +REFF G I +
Sbjct: 125 PSWERRKLGVMQALLRDKFRRDASLRERLLRSAPKNLIATNTWGEVYWGVCTGRGGNHLGKLLMGLRQEVQAGTDTDAWLLGSFNIAKPSAEHEPLSLEVTKGGAVIDTCKLGTEALIMIGKHSTADVQLEHPSISRRHAAILRDAKRGLLLVDLSSKAGTSLNGKRLPPSVGIPLKEG-AKIVFGGSSRAHVLRIHQTDALELLKAEHEKLSAQLQQLEADAQDASSLFGLIAPSQRVDPKRRKVFVGNLPFGATDESIREFFLGSGAIVDL 396
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A7S3NX51_EUPCR (Hypothetical protein n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NX51_EUPCR) HSP 1 Score: 137 bits (346), Expect = 4.860e-34 Identity = 93/277 (33.57%), Postives = 143/277 (51.62%), Query Frame = 1
Query: 16 EWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYT-----NSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVA--VDFAVTKGGEVVAEPSFEGKPIVRMGKLTDN-EVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLT---RVETGLREAKKSQLYANMSDPTASVGQP------------EPDSTIYVGNLEPSVTEDDLREFFADCGDIASVR 777
+W+ ++E + RDKFRRN + RE LL T +LV +S D WGV +G N+LG++LE +R DA+ K+ E W F+L T V F V KGG V+ + EG+ G + ++VM HPS+SR+HALLV+D L+D G+ G+ +D ++ +P +K + F +S R Y+++ E +KS+L ++ G+ + T++VGNL PS+ ED+LRE F +CG I S+R
Sbjct: 80 DWKLRRLGVMETVNRDKFRRNKELREKLLATQGRELVNVVPLEHDSEDSLFWGVIKNQGQNQLGRILENIRKDAILNKELEKWVCCNFRLQTDRKAIPIVKFDVYKGGSVLEKIELEGRSYFVFGSREETADIVMLHPSISRTHALLVIDCDSNVILIDPGSKAGTLVDEIPISNNMPYILKKDQKI-KFGQSTREYQISIDYSKSLNFFEQEKSKLEKDLKILENLEGEDLDLDTLQKSLGLNKNDTVWVGNLLPSIKEDELREIFEECGKIKSIR 355
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A7S3H1L7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1L7_9STRA) HSP 1 Score: 124 bits (310), Expect = 8.740e-31 Identity = 86/211 (40.76%), Postives = 119/211 (56.40%), Query Frame = 1
Query: 16 EWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGG-KGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEP--SFEGKPIVRMGKLTDN-EVVMAHPSVSRSHALLVVDRTFGAF-LVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKSQL 633
+W + E L+ DKF RN K +E L+ TGR L++ N D WGV KG N+LGKLLE+VR G D E W + +L VA++ VT+ G V E +FE K +GK D ++V AHP+VSR HA+LVV+RT G ++DLG++NG+ LDG + PY V ++LTF S R Y+ V+T E +K+ L
Sbjct: 32 DWTDRCISVAEMLLLDKFIRNRKLKEQLMKTGRRALIFKNDFGDLFWGVDDQLKGQNQLGKLLEKVRTVIDQGDDLETWVRHQVKLIESEKVALEVIVTRDGVPVPEDCKTFELKSKFLIGKSEDMCDIVAAHPTVSRVHAMLVVERTQGRLQVIDLGSANGTKLDGVALAPYEITAVPPT-SILTFGASARQYRFV-VDTQADEKRKTAL 240
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A7R9ZYJ3_9DINO (Hypothetical protein n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7R9ZYJ3_9DINO) HSP 1 Score: 125 bits (314), Expect = 3.570e-29 Identity = 92/271 (33.95%), Postives = 143/271 (52.77%), Query Frame = 1
Query: 37 RIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVW----CAMRFQLATPLDVAVDFA--VTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLV------VDRTFGAFLVDLGASNGSFLDGRRV-TPYVPEPVKAGGALLTFAKSKRTYKLT-RVETGLR--EAKKSQLY-------ANMSDPTASVGQPEPD-STIYVGNLEPSVTEDDLREFFADCGDIASVR 777
R +E + RDKFRR+ R L TG +LV+ N HDD WG+ G+G N LG++L+ VR L G + E+W C ++ + + L + + V E + K +GK+ N+VV HPSVSR HA++V RT L DLG+ +G+ +DG ++ P++ P++ G +++ S R+Y + + +R E K+ +L + DP A + + ST++VGNLE S TE DL+ FF DCG++ VR
Sbjct: 160 RAMERIQRDKFRRHEDFRAKLQDTGDRELVWVN-HDDSFWGMVRGQGSNHLGRVLQEVRESILNGTEFEMWLHMCCEVKDETGSLLPIQLQEVKLVENTKEHIVLHRLNNKTKYTLGKMPANDVVALHPSVSRKHAMIVHTKAALARRTGEVMLFDLGSKSGTSVDGVKLEAPFLMVPLRQG-SVIKLGVSTRSYTVKFDISAQIRALEQKERELMQECRIVETEVDDPVAVAKKRAMEASTVWVGNLEYSTTEADLKAFFRDCGEVVEVR 428
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A0V0R780_PSEPJ (SMAD/FHA domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R780_PSEPJ) HSP 1 Score: 119 bits (298), Expect = 1.140e-27 Identity = 84/276 (30.43%), Postives = 136/276 (49.28%), Query Frame = 1
Query: 16 EWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRV-----WGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVA--VDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKL----TRVETGL----REAKKS-QLYANMSDPTASVGQPEP------DSTIYVGNLEPSVTEDDLREFFADCGDIASVR 777
+W +++E+L+RDKFRRN +E L+ TG +L+ N++D+ WG GKG N LGKLLE +R D G D W F L L++ + V K G+ + + E K G N+V++AHP +SR HA ++ D L+DLG+ G++L+ + Y ++ +++F+ S R Y + T+V L R+ K+ L + +P S + + TIYVGNL S + D+++ F G + V+
Sbjct: 101 DWEQRKLKVMESLLRDKFRRNKDLKERLMETGNRQLI--NTYDEETESNLYWGHINGKGQNHLGKLLENIRNDIQRGLDLHKWIFFTFSLERDLNLVPLIKLNVFKDGKQIETLNLEKKNFFIFGTQKTNDVILAHPMISRQHACILCDNEQNIKLIDLGSKGGTYLNDELIEEYTGVDLEFDD-VISFSVSTRKYYVEIDYTQVYNSLMKQERDLKRELMLLEKLDNPNISKAELREVLGFSVEDTIYVGNLPFSASISDIKDHFKQYGSVKKVK 373
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0E504_PARTE (Uncharacterized protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E504_PARTE) HSP 1 Score: 119 bits (298), Expect = 3.470e-27 Identity = 71/197 (36.04%), Postives = 109/197 (55.33%), Query Frame = 1
Query: 13 PEWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHD---DRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLA--TPLDVAVDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKL 588
P W RI+E L+RDKFRRNA R+ L T +L++T +H ++ WGV GKG N++G+LLE++R D +D + W M F + + + V+ V K GE + + + + G N V +AHPS+SR HA + ++ LVDLG+ G+F + + V P++P V A + FAKS R Y++
Sbjct: 102 PHWTKQRLRIMEVLLRDKFRRNADIRDSLRATNNYQLIHTFTHSTPSNQYWGVVDGKGQNQIGRLLEQIRTDINNYEDQDKWLLMTFPIEQESKMIPKVELKVLKEGENLPKIEMKHSAFLYFGSHQRNHVHLAHPSISRRHAAIFINNQSQVCLVDLGSKGGTFHNEQFVEPHLPV-VLANEDKIKFAKSTRIYQV 297 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10929.1940.1 >prot_M-pyrifera_M_contig10929.1940.1 ID=prot_M-pyrifera_M_contig10929.1940.1|Name=mRNA_M-pyrifera_M_contig10929.1940.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=259bp MQPAPEWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRback to top mRNA from alignment at M-pyrifera_M_contig10929:422..5682- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10929.1940.1 ID=mRNA_M-pyrifera_M_contig10929.1940.1|Name=mRNA_M-pyrifera_M_contig10929.1940.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5261bp|location=Sequence derived from alignment at M-pyrifera_M_contig10929:422..5682- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10929:422..5682- >mRNA_M-pyrifera_M_contig10929.1940.1 ID=mRNA_M-pyrifera_M_contig10929.1940.1|Name=mRNA_M-pyrifera_M_contig10929.1940.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1554bp|location=Sequence derived from alignment at M-pyrifera_M_contig10929:422..5682- (Macrocystis pyrifera P11B4 male)back to top |