mRNA_M-pyrifera_M_contig10929.1940.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10929.1940.1
Unique NamemRNA_M-pyrifera_M_contig10929.1940.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: D8LBP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBP7_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 1.000e-144
Identity = 211/258 (81.78%), Postives = 236/258 (91.47%), Query Frame = 1
Query:    4 QPAPEWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKSQLYANMSDPTASVGQPEPDSTIYVGNLEPSVTEDDLREFFADCGDIASVR 777
            +P P+WR  SE+I EAL+RDKFRRNAKAREVL+GTGRVKLVYTN+HDDR WGVC GKG+NKLGKLLERVRADALAGKDTE WCA RFQLA PLDV V FAV+K G++VA+PSFEGKP++RMGKL DNEVVMAHPSVSRSHALLVVDR FGAFLVDLGASNGSF+DGRR++PYVPEP+KAGGA LTFAKSKRTY LT+VET LREAKK +LYA+MSDP AS  QP+PDST+YVGNL+PSVTEDD+REFFA+CG IASVR
Sbjct:   89 KPKPDWRGSSEKIAEALVRDKFRRNAKAREVLVGTGRVKLVYTNTHDDRFWGVCTGKGENKLGKLLERVRADALAGKDTEAWCATRFQLALPLDVMVGFAVSKAGKIVADPSFEGKPVIRMGKLADNEVVMAHPSVSRSHALLVVDRCFGAFLVDLGASNGSFVDGRRLSPYVPEPIKAGGAGLTFAKSKRTYTLTQVETDLREAKKGRLYASMSDPMASAAQPDPDSTVYVGNLDPSVTEDDIREFFAECGAIASVR 346          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A835YNI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.870e-53
Identity = 113/266 (42.48%), Postives = 151/266 (56.77%), Query Frame = 1
Query:   19 WRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTF-----GAFLVDLGASNGSFLDGRRVTPYVPEPVKAG----GALLTFAKSKRTYKLTRVETGLREAKKSQLYANMSDPTASVGQPEP-----DSTIYVGNLEPSVTEDDLREFFADCGDIASV 774
            WR+ SE I+EAL+RDKFRR+ K RE LLGTG   L Y N H+D++WGVC GKG+NKLG+                           P   A    ++KGG V+  P  EG  +V++GK+  N+V+M HPS SR HALL+V R       G  LVDLGA NG+F+ G R+ P+VP  V        A +TF  S+R Y++  +   LRE +K+ LYA ++ P A+ G          +T+YVGNL   VTE  LR  FA CG+IA++
Sbjct:   94 WRSRSEAIMEALVRDKFRRHDKYREQLLGTGAQLLAYVNEHNDKLWGVCDGKGENKLGEFA-----------------------LVPQCSAAPMNISKGGAVLDTPVIEGTALVQLGKVEGNDVLMEHPSTSRRHALLLVPRAGRGGQGGCLLVDLGAPNGTFVGGERLAPFVPRRVCGALGEAAATMTFGLSRREYRVASLRRDLREMQKAALYATVAAPAAAPGTAAAATTGGPNTVYVGNLSYDVTEAQLRAAFAPCGEIAAL 336          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: W7TWY4_9STRA (Rna recognition motif-containing protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWY4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 7.580e-49
Identity = 104/255 (40.78%), Postives = 148/255 (58.04%), Query Frame = 1
Query:   19 WRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGK-DTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEP--SFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKSQLYANMSDPTASVGQPEPDSTIYVGNLEPSVTEDDLREFFADCGDIASV 774
            W+  S  ++EAL+RDKFRR+   R+ L+ TG  +LVY N H+D+ WG C GKG N LG+LLERVRAD   G     +W    F   +   V +D +VT+ G  + E   + E K IV  GKL +N+V +AHPS SR HA++VV + +G  LVDL A+NGSFLD RR+ P+    + +G + +    S R Y  T  +      +   LY  + DP   +    P+  +++ NL   VTE+ +R+F ADCG + SV
Sbjct:  115 WKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPLPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGVSEVALGTSSRRYTFT-FDLAAAAKRSLALYEVLEDPL-KLAAARPELGVFMNNLPKDVTEEMVRDFVADCGTVLSV 367          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A4D9DEI1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEI1_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.310e-47
Identity = 106/256 (41.41%), Postives = 151/256 (58.98%), Query Frame = 1
Query:   19 WRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGK-DTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEP--SFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKS-QLYANMSDPTASVGQPEPDSTIYVGNLEPSVTEDDLREFFADCGDIASV 774
            W+  S  ++EAL+RDKFRR+   R+ L+ TG  +LVY N H+D+ WG C GKG N LG+LLERVRAD   G     +W    F   +   V +D +VT+ G  + E   + E K IV  GKL +N+V +AHPS SR HA++VV + +G  LVDL A+NGSFLD RR+ P+    + +G + +    S R Y  T       +AK+S  LY  + DP   +    P+  +++ +L   VTE+ +R+F ADCG + SV
Sbjct:  115 WKLKSLVVMEALLRDKFRRHKGLRQQLMNTGTKQLVYENEHNDQFWGTCKGKGHNHLGQLLERVRADEKEGLLGILLWAKQVFNATSDSKVRLDVSVTREGHPMPEADLTLERKAIVTFGKLAENDVPVAHPSTSRFHAMVVVSQPYGPLLVDLEAANGSFLDERRLEPFKGAALHSGISEVALGTSSRRYTFTFDLAA--DAKRSLALYEVLEDPL-KLAAARPELGVFMKHLPKDVTEEMVRDFVADCGTVLSV 367          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A7S0JJA0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJA0_9EUKA)

HSP 1 Score: 145 bits (365), Expect = 2.360e-36
Identity = 95/273 (34.80%), Postives = 140/273 (51.28%), Query Frame = 1
Query:   13 PEWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPL--DVAVDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKS----------QLYANMSDPTASVGQPEPDSTI-------YVGNLEPSVTEDDLREFFADCGDIASV 774
            P W      +++AL+RDKFRR+A  RE LL +    L+ TN+  +  WGVC G+G N LGKLL  +R +  AG DT+ W    F +A P      +   VTKGG V+       + ++ +GK +  +V + HPS+SR HA ++ D   G  LVDL +  G+ L+G+R+ P V  P+K G A + F  S R + L   +T   E  K+          QL A+  D ++  G   P   +       +VGNL    T++ +REFF   G I  +
Sbjct:  125 PSWERRKLGVMQALLRDKFRRDASLRERLLRSAPKNLIATNTWGEVYWGVCTGRGGNHLGKLLMGLRQEVQAGTDTDAWLLGSFNIAKPSAEHEPLSLEVTKGGAVIDTCKLGTEALIMIGKHSTADVQLEHPSISRRHAAILRDAKRGLLLVDLSSKAGTSLNGKRLPPSVGIPLKEG-AKIVFGGSSRAHVLRIHQTDALELLKAEHEKLSAQLQQLEADAQDASSLFGLIAPSQRVDPKRRKVFVGNLPFGATDESIREFFLGSGAIVDL 396          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A7S3NX51_EUPCR (Hypothetical protein n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NX51_EUPCR)

HSP 1 Score: 137 bits (346), Expect = 4.860e-34
Identity = 93/277 (33.57%), Postives = 143/277 (51.62%), Query Frame = 1
Query:   16 EWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYT-----NSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVA--VDFAVTKGGEVVAEPSFEGKPIVRMGKLTDN-EVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLT---RVETGLREAKKSQLYANMSDPTASVGQP------------EPDSTIYVGNLEPSVTEDDLREFFADCGDIASVR 777
            +W+     ++E + RDKFRRN + RE LL T   +LV       +S D   WGV   +G N+LG++LE +R DA+  K+ E W    F+L T       V F V KGG V+ +   EG+     G   +  ++VM HPS+SR+HALLV+D      L+D G+  G+ +D   ++  +P  +K    +  F +S R Y+++          E +KS+L  ++       G+               + T++VGNL PS+ ED+LRE F +CG I S+R
Sbjct:   80 DWKLRRLGVMETVNRDKFRRNKELREKLLATQGRELVNVVPLEHDSEDSLFWGVIKNQGQNQLGRILENIRKDAILNKELEKWVCCNFRLQTDRKAIPIVKFDVYKGGSVLEKIELEGRSYFVFGSREETADIVMLHPSISRTHALLVIDCDSNVILIDPGSKAGTLVDEIPISNNMPYILKKDQKI-KFGQSTREYQISIDYSKSLNFFEQEKSKLEKDLKILENLEGEDLDLDTLQKSLGLNKNDTVWVGNLLPSIKEDELREIFEECGKIKSIR 355          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A7S3H1L7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1L7_9STRA)

HSP 1 Score: 124 bits (310), Expect = 8.740e-31
Identity = 86/211 (40.76%), Postives = 119/211 (56.40%), Query Frame = 1
Query:   16 EWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGG-KGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVAVDFAVTKGGEVVAEP--SFEGKPIVRMGKLTDN-EVVMAHPSVSRSHALLVVDRTFGAF-LVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVETGLREAKKSQL 633
            +W      + E L+ DKF RN K +E L+ TGR  L++ N   D  WGV    KG N+LGKLLE+VR     G D E W   + +L     VA++  VT+ G  V E   +FE K    +GK  D  ++V AHP+VSR HA+LVV+RT G   ++DLG++NG+ LDG  + PY    V    ++LTF  S R Y+   V+T   E +K+ L
Sbjct:   32 DWTDRCISVAEMLLLDKFIRNRKLKEQLMKTGRRALIFKNDFGDLFWGVDDQLKGQNQLGKLLEKVRTVIDQGDDLETWVRHQVKLIESEKVALEVIVTRDGVPVPEDCKTFELKSKFLIGKSEDMCDIVAAHPTVSRVHAMLVVERTQGRLQVIDLGSANGTKLDGVALAPYEITAVPPT-SILTFGASARQYRFV-VDTQADEKRKTAL 240          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A7R9ZYJ3_9DINO (Hypothetical protein n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7R9ZYJ3_9DINO)

HSP 1 Score: 125 bits (314), Expect = 3.570e-29
Identity = 92/271 (33.95%), Postives = 143/271 (52.77%), Query Frame = 1
Query:   37 RIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVW----CAMRFQLATPLDVAVDFA--VTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLV------VDRTFGAFLVDLGASNGSFLDGRRV-TPYVPEPVKAGGALLTFAKSKRTYKLT-RVETGLR--EAKKSQLY-------ANMSDPTASVGQPEPD-STIYVGNLEPSVTEDDLREFFADCGDIASVR 777
            R +E + RDKFRR+   R  L  TG  +LV+ N HDD  WG+  G+G N LG++L+ VR   L G + E+W    C ++ +  + L + +     V    E +       K    +GK+  N+VV  HPSVSR HA++V        RT    L DLG+ +G+ +DG ++  P++  P++ G +++    S R+Y +   +   +R  E K+ +L          + DP A   +   + ST++VGNLE S TE DL+ FF DCG++  VR
Sbjct:  160 RAMERIQRDKFRRHEDFRAKLQDTGDRELVWVN-HDDSFWGMVRGQGSNHLGRVLQEVRESILNGTEFEMWLHMCCEVKDETGSLLPIQLQEVKLVENTKEHIVLHRLNNKTKYTLGKMPANDVVALHPSVSRKHAMIVHTKAALARRTGEVMLFDLGSKSGTSVDGVKLEAPFLMVPLRQG-SVIKLGVSTRSYTVKFDISAQIRALEQKERELMQECRIVETEVDDPVAVAKKRAMEASTVWVGNLEYSTTEADLKAFFRDCGEVVEVR 428          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0A0V0R780_PSEPJ (SMAD/FHA domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R780_PSEPJ)

HSP 1 Score: 119 bits (298), Expect = 1.140e-27
Identity = 84/276 (30.43%), Postives = 136/276 (49.28%), Query Frame = 1
Query:   16 EWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDRV-----WGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVA--VDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKL----TRVETGL----REAKKS-QLYANMSDPTASVGQPEP------DSTIYVGNLEPSVTEDDLREFFADCGDIASVR 777
            +W     +++E+L+RDKFRRN   +E L+ TG  +L+  N++D+       WG   GKG N LGKLLE +R D   G D   W    F L   L++   +   V K G+ +   + E K     G    N+V++AHP +SR HA ++ D      L+DLG+  G++L+   +  Y    ++    +++F+ S R Y +    T+V   L    R+ K+   L   + +P  S  +         + TIYVGNL  S +  D+++ F   G +  V+
Sbjct:  101 DWEQRKLKVMESLLRDKFRRNKDLKERLMETGNRQLI--NTYDEETESNLYWGHINGKGQNHLGKLLENIRNDIQRGLDLHKWIFFTFSLERDLNLVPLIKLNVFKDGKQIETLNLEKKNFFIFGTQKTNDVILAHPMISRQHACILCDNEQNIKLIDLGSKGGTYLNDELIEEYTGVDLEFDD-VISFSVSTRKYYVEIDYTQVYNSLMKQERDLKRELMLLEKLDNPNISKAELREVLGFSVEDTIYVGNLPFSASISDIKDHFKQYGSVKKVK 373          
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Match: A0E504_PARTE (Uncharacterized protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E504_PARTE)

HSP 1 Score: 119 bits (298), Expect = 3.470e-27
Identity = 71/197 (36.04%), Postives = 109/197 (55.33%), Query Frame = 1
Query:   13 PEWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHD---DRVWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLA--TPLDVAVDFAVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTFGAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKL 588
            P W     RI+E L+RDKFRRNA  R+ L  T   +L++T +H    ++ WGV  GKG N++G+LLE++R D    +D + W  M F +   + +   V+  V K GE + +   +    +  G    N V +AHPS+SR HA + ++      LVDLG+  G+F + + V P++P  V A    + FAKS R Y++
Sbjct:  102 PHWTKQRLRIMEVLLRDKFRRNADIRDSLRATNNYQLIHTFTHSTPSNQYWGVVDGKGQNQIGRLLEQIRTDINNYEDQDKWLLMTFPIEQESKMIPKVELKVLKEGENLPKIEMKHSAFLYFGSHQRNHVHLAHPSISRRHAAIFINNQSQVCLVDLGSKGGTFHNEQFVEPHLPV-VLANEDKIKFAKSTRIYQV 297          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10929.1940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBP7_ECTSI1.000e-14481.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNI4_9STRA1.870e-5342.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TWY4_9STRA7.580e-4940.78Rna recognition motif-containing protein n=2 Tax=N... [more]
A0A4D9DEI1_9STRA1.310e-4741.41Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0JJA0_9EUKA2.360e-3634.80Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S3NX51_EUPCR4.860e-3433.57Hypothetical protein n=1 Tax=Euplotes crassus TaxI... [more]
A0A7S3H1L7_9STRA8.740e-3140.76Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A7R9ZYJ3_9DINO3.570e-2933.95Hypothetical protein n=2 Tax=Pyrodinium bahamense ... [more]
A0A0V0R780_PSEPJ1.140e-2730.43SMAD/FHA domain n=1 Tax=Pseudocohnilembus persalin... [more]
A0E504_PARTE3.470e-2736.04Uncharacterized protein n=2 Tax=Paramecium tetraur... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10929contigM-pyrifera_M_contig10929:422..5682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score436.0
Seed ortholog evalue1.2e-119
Seed eggNOG ortholog2880.D8LBP7
Preferred nameCIRBP
KEGG koko:K05658,ko:K12885,ko:K13098,ko:K13195,ko:K14398
KEGG TC3.A.1.201
KEGG Pathwayko02010,ko03015,ko03040,ko04976,ko05202,ko05206,ko05226,map02010,map03015,map03040,map04976,map05202,map05206,map05226
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006417,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009314,GO:0009409,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034063,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0035770,GO:0036464,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043488,GO:0043489,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045934,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070181,GO:0070925,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:1990904,GO:2000112,GO:2000113
EggNOG free text desc.RNA binding
EggNOG OGsKOG0118@1,KOG0118@2759
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-27_003190.1
EC3.6.3.44
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03019,ko03041,ko04090,ko04147
Exons5
Model size777
Cds size777
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10929.1940.1prot_M-pyrifera_M_contig10929.1940.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10929 422..5682 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815602.7290208-CDS-M-pyrifera_M_contig10929:421..5081622815602.7290208-CDS-M-pyrifera_M_contig10929:421..508Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 422..508 -
1692277482.8608-CDS-M-pyrifera_M_contig10929:421..5081692277482.8608-CDS-M-pyrifera_M_contig10929:421..508Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 422..508 -
1622815602.7442765-CDS-M-pyrifera_M_contig10929:1859..20451622815602.7442765-CDS-M-pyrifera_M_contig10929:1859..2045Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 1860..2045 -
1692277482.8711302-CDS-M-pyrifera_M_contig10929:1859..20451692277482.8711302-CDS-M-pyrifera_M_contig10929:1859..2045Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 1860..2045 -
1622815602.7596645-CDS-M-pyrifera_M_contig10929:3527..36641622815602.7596645-CDS-M-pyrifera_M_contig10929:3527..3664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 3528..3664 -
1692277482.87906-CDS-M-pyrifera_M_contig10929:3527..36641692277482.87906-CDS-M-pyrifera_M_contig10929:3527..3664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 3528..3664 -
1622815602.775605-CDS-M-pyrifera_M_contig10929:4754..49521622815602.775605-CDS-M-pyrifera_M_contig10929:4754..4952Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 4755..4952 -
1692277482.8870118-CDS-M-pyrifera_M_contig10929:4754..49521692277482.8870118-CDS-M-pyrifera_M_contig10929:4754..4952Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 4755..4952 -
1622815602.7918055-CDS-M-pyrifera_M_contig10929:5513..56821622815602.7918055-CDS-M-pyrifera_M_contig10929:5513..5682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 5514..5682 -
1692277482.8949149-CDS-M-pyrifera_M_contig10929:5513..56821692277482.8949149-CDS-M-pyrifera_M_contig10929:5513..5682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10929 5514..5682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10929.1940.1

>prot_M-pyrifera_M_contig10929.1940.1 ID=prot_M-pyrifera_M_contig10929.1940.1|Name=mRNA_M-pyrifera_M_contig10929.1940.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=259bp
MQPAPEWRAGSERIVEALIRDKFRRNAKAREVLLGTGRVKLVYTNSHDDR
VWGVCGGKGDNKLGKLLERVRADALAGKDTEVWCAMRFQLATPLDVAVDF
AVTKGGEVVAEPSFEGKPIVRMGKLTDNEVVMAHPSVSRSHALLVVDRTF
GAFLVDLGASNGSFLDGRRVTPYVPEPVKAGGALLTFAKSKRTYKLTRVE
TGLREAKKSQLYANMSDPTASVGQPEPDSTIYVGNLEPSVTEDDLREFFA
DCGDIASVR
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mRNA from alignment at M-pyrifera_M_contig10929:422..5682-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10929.1940.1 ID=mRNA_M-pyrifera_M_contig10929.1940.1|Name=mRNA_M-pyrifera_M_contig10929.1940.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5261bp|location=Sequence derived from alignment at M-pyrifera_M_contig10929:422..5682- (Macrocystis pyrifera P11B4 male)
ATGCAGCCCGCGCCGGAGTGGCGGGCCGGTTCGGAAAGGATCGTGGAGGC CCTTATTCGAGACAAGTTTAGACGCAACGCCAAGGCCAGGGAGGTCCTGC TCGGAACGGGTCGCGTGAAACTGGTTTACACAAACAGCCACGACGACAGG GTCTGGGGCGTGTGTGGCGGTGAGAAAGCAGCAGCAGCCGCTTTTGTGAG ACACGGCGCGTCTCATTTGGGCGCTTGGTATACACGGAGCAGTCACTGTG CTTGGTTTTCTCTCTCGCGTGAGTCGAGTACCAGTACTGCTTTTGCTACC TGCTACGTAGAGCGCTGGCGCAAGCAGCGCCGCGGGCGTTTTTCTTCGCC GCAGGCGTTTTTTTTGCTCATCCTGCGTCGTTTTATCGACAGGTTCATGG TGACGGGGAGGCAGGACGAATGTAGGTAGCTGGCGGGGTTTTCTATTGCA TACGCTGGCGAGTTTTACGATAATTGAGTCGTCGTGCTTGGGAAGGGTGC GATAGTTTTACGTGTCGTAACTACCGCATGTAATGATGGGGACGGGACCC CACTAGGCGTCACGAGACAAAGCGGGCCCAGGCGGAAACCCGGCGCGCCA CCTGCGGCACGTATGCTTTTCTCTCGGCGTGTGTGTGCCGACCTTCTTTT TTTTTTCGTCGGTTAGGTAAAAGTTCGCGTCCGCACCTTTTTTTTCCCTG TTGCTGCTCCTGTCAATGTTGATGTTCCAGGCAAGGGCGACAACAAGCTT GGCAAGCTGCTTGAGCGAGTCCGGGCGGACGCGCTCGCAGGCAAGGACAC GGAAGTGTGGTGCGCCATGCGCTTCCAGCTGGCCACCCCACTGGATGTAG CGGTGGATTTTGCTGTGACGAAGGGCGGCGAGGTTGTGGCGGAGCCATCG TTCGAGGGGAAGCCGATCGTCAGGATGGGTGAGGGGCAAAAGCGTCGTGA AAGTGACCATGAGTCTGTTTTCTTGTGGTGTCTATGGTCGTTGTGTTGCG CACGCGGTTGCTTTTTTGTGTACTTTCCCTTGGAATGGAAGAGGTACCGT CGCCGTTATGCTGCACGCGTGGTTGCTTTTTCGTGTACCTTATTTGGACT AGAGGAGGTGTCGTCGTCGTTGTGTTGCACGCTTGGGTGCTTTTTCTGTA CCTTCCTTGGAATAGAAGAGGGGGGGGTAGGGGAGTGTAGGGAATGGAGG TGGGGGAGTCGCAGCAAAACGGGCTAGTGTTATCTCCCCCGCGTCGGTGG GAGCGACCTTGTGCCGATTCTGTCTGCCAAATGCTGTCTTCATTAATACC GGTGGTTCGCACGTCTGATACTATCCGTTTATGTTGTATACCTGGTACTT GTGATTGTTGGTGGTGTCGTCGGTGCACTTTCACCGCTCACGAACTACTG TACTCGTACTGATGTTGTGAGGGCACGCCGCGGTTTACTTTCGCGGTGTT GCGTGTGCCAGACGTCCTGCTTTTGTTGGTTCCTCGGGGCTCCCGGCTGC GATTCGTTTCCAGCACCGAGATGGCCGTACGTTACTCGCATATACGAACT ACTGTTACTAAAAAGTGCGCAGGCGAAAAATCACGCGCCAGTCACAGCGT TCGTAGTCGAAGCTTAAGCGTTAGATCAAAGGTTCACACCCCACAACCTC CCCCCCCCAATGTTTTTTCACATGGTGCCTTCCTTGGCGCGCTTGACCTC GAACTGTTTCACGCTTCGGATAAATCAGACAAAAATGCCCATTTTTTCAT GATGTTTTTTTCGGGGGGGCAGATAGACCCCTGATTTACGTACGTACATG AACTGCACGATTTATCAGTAGATCGTGTACTTCCAGGGTGAGATCTGTGT GACACACGGCCGGCCTTGCCACGCGCGGACATGCTTGTCCCCGGGGGGGA CCTGCATTTGGTACGGCTCTTGCACACCGTATCAGAACGTCGAATACATG ATCTGCAGTACAGGAGATGATCTACAGATAGATCATGATCTGTCAGACGT GTGAATTGTTTCGTGCAGGCAAGCTGACCGATAACGAGGTGGTGATGGCC CACCCTTCAGTGAGCCGGTCGCACGCTCTCCTGGTGGTGGACAGGACCTT CGGGGCGTTCCTGGTGGATCTGGGCGCCTCCAACGGCTCTTTCCTTGACG GCCGGGTGTGTCCGTTGTATTGGTGTTTTATTTTGTTTTTTCCCGCCCAT TTGCTGGATCGTTTTTTTTTCAACCCCTTTTATAAATGTCCCCACGTTTT TTGGGGACCAAACTACTTGAAAATAGAGTTGGGTCATTCATGCAGCAGTA AATGGGCTACAATAGCCCCTTTAGTACTACAGCTGTAGTACATTAATCTG CACGCACTTTTTTTTTTCGACAAACTACTCGGAATTAGATGCGAAATCAT TTTTTTTTTGTCGGCAGTATTTTCCCGCCCATTCGCTGTTCTCAACAGCA CAACCAGAACTGCGCCCCTGTTTTTTTTCTCGTCTAGGAGCAAATTGGAA TTATTGGAGTTGAGACATTGCTGTACAGGCAGTATGAGGGTTCTAGACGT AAAAAGTCAATGGCAAGAAGCTGTACCCACACTGCTGTTGTTATGGTACG AGGGGGGGAAAGGGGGCATTGTGCGGCTGTGGCTTAACCCGTTCAAGCCG TTCAATCCAAGCACCAGGCGATCATGCGTCCTTCCGCGATCGAATAATGC TTGAGACGCTATATATTCTTTCTTATGCGTCCTTGAGACGCTTATATATA CTTTCTTGTAGACGCTATAAGTACTTTCTTATAGACGCTATATGTACTTT CTTATAGACGCTACATATACTTTCTTATAGACGCTGTATATACTTTCTTA TAGACGATATATATACTTTCTTATAGACGCTATATATACTTTATTATAGA CGCTATATATACTTTATTATAGACGCTATATATACTTTCTTATAGACGCT GTATATACTTCGTCATAGACGTTATATATACTTTCTTATAGACGCTATAT ATACTTTCTTATAGACGCTATATATACTTTCTTATAGACGTTATATATAC TTTCTTGTAGACGCTATATATACTTTCTTGTAGACGCTATATATACTTTC TTATAGACGCTCTATATACTTTGTCATAGACGCTCTATATACTTTCTTAT ACATGTTAACGGCCCGTACATCGCGGCTAGAGGTTGGTCTGTGCCTGTGT TGCTGCGGAAGAAACCAACCTTTCGAGGCTGATCATGGCTTGTTCGCCAT TTTGTGTGCGGTCTACGTACGTATGACCCCCCGCCGTGCGTGCGTGCGCC CTGTCGTTATTTCTTCAATGCGGAAAAATGTTGGTGGCATGATTTGACCA GCCTCTATTCAACCTTATCCCGCCCGCTCGCTGTTTACGTGCTCCTTGTG CTTGTGTCATTTCATACCGCCTTATCCTTGCTCGTTGCATCCCCTCGGCC GGGGTTATCAATATAAGAACAAACCTAAGCGTCGACTCCCCCCCCCCCCC GCCCCCCTAGTTTAACCATCCCTTGATAGTTCTGCCCGTCTTGTCGGGAG TCATTCACAAAATTCCAGCCCCAAGCGTCGACCCTGCCCCCCCTCCCCCC TCTCTGCCGCTTCCGCCTCCTCCCATTTTCGGTTCAGCGAGTGACGCCTT ACGTTCCCGAGCCTGTGAAAGCGGGCGGCGCGCTCCTGACGTTCGCAAAG TCGAAAAGAACGTACAAGTTGACGCGGGTGGAGACGGGCTTGAGGGAGGC GAAAAAGAGCCAGCTTTACGCCAACATGTCGGATCCCACAGCGTCTGTCG GACAGCCGGAACCGGATTCCACGGTGACTTTTTTTTTTCTTGCTCTTTTT CTTTCTTGTTCTTGACCTCCGCCCGTTCTTGAGTCCGTTCTTGAGCCCGT TCTCAAGCCTTTCTCGAGCCTGTTCTTTAGCCCGTCCTTGCGATCGAATT TAAGCTATATATTCGCCGTACTCGTAGTGTGTGACTCCTACACTTGTTTG ACGTGTGTCAGTCAAGAGCAGTAGTTGCAGTGTTAGGTACTTCGAAGCAC CTTTGCAGTGTGTCGCGGCCTCGTGCATACTTGTTCCACTTGTGTCAGTC AAGAGCAGTCATTGTTGTGCCTGTGCGCTACATGCTACCAGGCGATGTAT ACCGCGGCGTCATTTTTACCGATCTTGCGACTCGGTCGGCTGCCAAGACC CAACGTTTGAGACGGTCGTTGACGGCTGTGATTGCCCTCTTGTACAGTAG CCTAAGGCCCTGTCGGCGGGCGCCCGAGGGCTCGGAATTCGGTAAAGCAG AACCCGCCGCGCGCACAGGAAATCTCTGCTCGTTGGTGGTAAATTACTCA TGTCGTAAATTCGGCAAATAAGTCTGGTCTGAGGCTTGTCTGCACCCCCT CAAACCAACCCCATGCCCTCTGCGCCCACTGTACCGTATTGGCCGCCCTC TCTCAGCTCAACGCGACGTATGATATAATACGTGATGTGTTGGTTGTGGT GGTGGTGGTGGTGGTGTCGGTGTTGGTGTTGGTGCTGTTGCTGCTGTTGT TGTTGTCGCTGCTGTTATTGTTAATGCCGTTCTTGTTGCTCTTGTCGTTG TTTTTTCTGTGCGTCAAGTATCAGCTGATGGTGTGATCATCCTGATGTCA TTCGACTCGTCTTTCTGGACGACTGCATCAGTCAGTTGCCGCGACAAAGA AAGGTCAATTTGCTGTGACAGGAAAAAAGGTCGCTTGCTGCGACAAGAGT GTCACGACCGCTGCGACAATAATGCGCGCGTCGGACAGACCGCGATCTAC TGCTGTAAAGATATTCTAACTCCTAACCTGCCGTTATCAAATGCTGGGCA GTATCTGTGTTTCAGTAGTATCGATTCAACCCAGGAACCAAGTCCTACCA TAGATCAGGCAGGTTGCACGGTTCCCGCCCGGCAATATGAGCTATTAATA AATCGTATGTACACACCAGGTACCAGGTATCAGGAATATATGTGCCGTGA AATATATAATATGACCTGAAATATAGAGATCATGACGTAGCAATCGATGA GATGCTCCGAGGTTTGTGCAAGTATGTATGGCAATTGCTGATATTGTACA AGAATGGTGCTTGCTGTGTGGCACCAAATGCCACTTGACGCGACCTTCTG CCTGTGCTGGCTGTCCCCATCCAGATTTACGTCGGTAACCTGGAGCCTTC TGTGACGGAGGATGACCTCCGCGAGTTCTTCGCCGACTGCGGGGACATAG CGTCGGTGCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10929:422..5682-

>mRNA_M-pyrifera_M_contig10929.1940.1 ID=mRNA_M-pyrifera_M_contig10929.1940.1|Name=mRNA_M-pyrifera_M_contig10929.1940.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1554bp|location=Sequence derived from alignment at M-pyrifera_M_contig10929:422..5682- (Macrocystis pyrifera P11B4 male)
ATGCAGCCCGCGCCGGAGTGGCGGGCCGGTTCGGAAAGGATCGTGGAGGC
CCTTATTCGAGACAAGTTTAGACGCAACGCCAAGGCCAGGGAGGTCCTGC
TCGGAACGGGTCGCGTGAAACTGGTTTACACAAACAGCCACGACGACAGG
GTCTGGGGCGTGTGTGGCGATGCAGCCCGCGCCGGAGTGGCGGGCCGGTT
CGGAAAGGATCGTGGAGGCCCTTATTCGAGACAAGTTTAGACGCAACGCC
AAGGCCAGGGAGGTCCTGCTCGGAACGGGTCGCGTGAAACTGGTTTACAC
AAACAGCCACGACGACAGGGTCTGGGGCGTGTGTGGCGGCAAGGGCGACA
ACAAGCTTGGCAAGCTGCTTGAGCGAGTCCGGGCGGACGCGCTCGCAGGC
AAGGACACGGAAGTGTGGTGCGCCATGCGCTTCCAGCTGGCCACCCCACT
GGATGTAGCGGTGGATTTTGCTGTGACGAAGGGCGGCGAGGTTGTGGCGG
AGCCATCGTTCGAGGGGAAGCCGATCGTCAGGATGGGCAAGGGCGACAAC
AAGCTTGGCAAGCTGCTTGAGCGAGTCCGGGCGGACGCGCTCGCAGGCAA
GGACACGGAAGTGTGGTGCGCCATGCGCTTCCAGCTGGCCACCCCACTGG
ATGTAGCGGTGGATTTTGCTGTGACGAAGGGCGGCGAGGTTGTGGCGGAG
CCATCGTTCGAGGGGAAGCCGATCGTCAGGATGGGCAAGCTGACCGATAA
CGAGGTGGTGATGGCCCACCCTTCAGTGAGCCGGTCGCACGCTCTCCTGG
TGGTGGACAGGACCTTCGGGGCGTTCCTGGTGGATCTGGGCGCCTCCAAC
GGCTCTTTCCTTGACGGCCGGGCAAGCTGACCGATAACGAGGTGGTGATG
GCCCACCCTTCAGTGAGCCGGTCGCACGCTCTCCTGGTGGTGGACAGGAC
CTTCGGGGCGTTCCTGGTGGATCTGGGCGCCTCCAACGGCTCTTTCCTTG
ACGGCCGGCGAGTGACGCCTTACGTTCCCGAGCCTGTGAAAGCGGGCGGC
GCGCTCCTGACGTTCGCAAAGTCGAAAAGAACGTACAAGTTGACGCGGGT
GGAGACGGGCTTGAGGGAGGCGAAAAAGAGCCAGCTTTACGCCAACATGT
CGGATCCCACAGCGTCTGTCGGACAGCCGGAACCGGATTCCACGCGAGTG
ACGCCTTACGTTCCCGAGCCTGTGAAAGCGGGCGGCGCGCTCCTGACGTT
CGCAAAGTCGAAAAGAACGTACAAGTTGACGCGGGTGGAGACGGGCTTGA
GGGAGGCGAAAAAGAGCCAGCTTTACGCCAACATGTCGGATCCCACAGCG
TCTGTCGGACAGCCGGAACCGGATTCCACGATTTACGTCGGTAACCTGGA
GCCTTCTGTGACGGAGGATGACCTCCGCGAGTTCTTCGCCGACTGCGGGG
ACATAGCGTCGGTGCGTATTTACGTCGGTAACCTGGAGCCTTCTGTGACG
GAGGATGACCTCCGCGAGTTCTTCGCCGACTGCGGGGACATAGCGTCGGT
GCGT
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