mRNA_M-pyrifera_M_contig109268.1937.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: A0A7Y2N8B1_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N8B1_9ACTN) HSP 1 Score: 144 bits (364), Expect = 3.390e-38 Identity = 71/113 (62.83%), Postives = 87/113 (76.99%), Query Frame = 1
Query: 46 LTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLNAVPAVATDWSTDDNVTWTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIEGWGDVEAG 384
++ GIVEP++IDSFN QDSEGFEV RL+FDGLTD+ SDL A+PAVA W +D WTFNL+ TFHNG VTAQSFI+ + +A+PD SDVSY G +AGIEG+GDV +G
Sbjct: 73 VSQGIVEPSFIDSFNIQDSEGFEVGRLIFDGLTDFDSDLKAIPAVAESWDHEDFTVWTFNLKPGTTFHNGETVTAQSFINAFTYLASPDAASDVSYYGD-VAGIEGFGDVASG 184
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: A0A7C1UHQ2_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UHQ2_9ACTN) HSP 1 Score: 110 bits (276), Expect = 7.960e-26 Identity = 53/111 (47.75%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 37 GGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLNAVPAVATDWSTDDNVTWTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIEGWG 369
GG+L G+ EP I + G E+ LLFDGLT G D A+PAVA W +DD W F+LR D F NG PVTAQSF+D + R+A+P + ++ GSY+ GI GWG
Sbjct: 103 GGTLRVGLPEPAGISPATVEGLSGLEITDLLFDGLTSLGPDGRALPAVAETWESDDGAIWDFHLRSDAVFENGEPVTAQSFVDAFTRLADPRTSAPLAPLGSYVLGISGWG 213
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: A0A1M6WFS0_PSETH (Oligopeptide transport system substrate-binding protein n=2 Tax=Pseudonocardia thermophila TaxID=1848 RepID=A0A1M6WFS0_PSETH) HSP 1 Score: 102 bits (255), Expect = 5.880e-23 Identity = 56/109 (51.38%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 37 GGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLNAVPAVATDWSTDDNVT-WTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIE 360
GG GI EPT ID +N Q+SEG VA LF GL D VP VATDWS +D+ + WTFNL+ + FHNG V A SF GW RVA P++ S+VSY I G E
Sbjct: 83 GGVFRLGITEPTAIDPYNVQESEGTSVANALFTGLVQVEPDGTVVPGVATDWSANDDCSQWTFNLKPNTHFHNGEVVDATSFKRGWERVAAPNSGSEVSYHLDVIQGYE 191
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: A0A132N4M2_9ACTN (Peptide ABC transporter substrate-binding protein n=2 Tax=Carbonactinospora thermoautotrophica TaxID=1469144 RepID=A0A132N4M2_9ACTN) HSP 1 Score: 102 bits (254), Expect = 7.520e-23 Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 13 ESDGETDGGGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLNAVPAVATDWSTDDNVT-WTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIEGWGDVEAG 384
ES G+T GG+ GIVEPT ID +N Q+SEG VA LF GL D +D VP +A S +DN T WTF ++ F NG PV A++FI GW R A SDV+Y ++AGI+G+ ++AG
Sbjct: 41 ESSGKT--GGTFRLGIVEPTAIDPYNAQESEGILVAHQLFTGLVDVKADGTIVPKLAEQRSPNDNCTEWTFKIKQGTKFTNGEPVDAEAFIRGWTRAAKKSAASDVAY---HLAGIQGFDQLQAG 160
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: A0A4Y4K3K0_9ACTN (Peptide ABC transporter substrate-binding protein n=3 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A4Y4K3K0_9ACTN) HSP 1 Score: 101 bits (252), Expect = 1.390e-22 Identity = 60/126 (47.62%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 10 GESDGETDGGGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLNAVPAVATDWS-TDDNVTWTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIEGWGDVEAG 384
G G GGS GI EP ID +N Q+SEG V LF GL +D VPA+AT + D TWTF ++ D F NG V A+SFI GWNRVA SDV+Y ++AGIEG+GDV++G
Sbjct: 33 GSGKGSGKDGGSFRMGITEPVAIDPYNAQESEGILVTTNLFTGLYLPTADGQVVPALATSKKVSSDGKTWTFGIKKDTKFTNGEAVDAESFIRGWNRVAQKSAASDVAY---HMAGIEGFGDVQSG 155
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: UPI00140884F3 (ABC transporter substrate-binding protein n=1 Tax=Phytoactinopolyspora limicola TaxID=2715536 RepID=UPI00140884F3) HSP 1 Score: 100 bits (250), Expect = 2.550e-22 Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 25 ETDGGGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLN-AVPAVATDWSTDDNVTWTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLS-DVSYQGSYI 348
E + GG + + EP ++ N+ + G V LF GLT D A +ATDW TDDN+TWTFNLRDD TFHNG+PVTAQSF+D WN A+PDN + S+ ++
Sbjct: 44 EVEAGGEFSIYLCEPQFLVPGNSTEVCGSAVLEQLFSGLTAVDYDTGEAYGLIATDWETDDNITWTFNLRDDFTFHNGDPVTAQSFVDTWNWAADPDNAQQNASFYDKFV 153
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: A0A4V3FSD8_9PSEU (Oligopeptide transport system substrate-binding protein n=1 Tax=Actinophytocola oryzae TaxID=502181 RepID=A0A4V3FSD8_9PSEU) HSP 1 Score: 100 bits (249), Expect = 3.700e-22 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 37 GGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLNAVPAVATDWSTDDNVT-WTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIEGWGDVEAG 384
GG+ +G+ EPT ID +N Q+SEG V + LF GL P VAT W +D+ T WTF+L+ FHNG VT+ SF GW RVA D+ S+V+Y ++AGIEG+ +++AG
Sbjct: 59 GGTFRFGLTEPTAIDPYNAQESEGLLVTKYLFTGLIQVDPLGEVKPGVATKWEANDDCTEWTFDLKTGTKFHNGEEVTSASFKRGWERVAAKDSASEVAY---HLAGIEGFDEMQAG 172
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: UPI00167EE1AA (ABC transporter substrate-binding protein n=1 Tax=Streptomyces echinoruber TaxID=68898 RepID=UPI00167EE1AA) HSP 1 Score: 100 bits (248), Expect = 4.910e-22 Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 1 DTDGESDGETDG--GGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLNAVPAVATDW-STDDNVTWTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIEGWGDVEAG 384
D G S G G GG+ GI EP ID +N Q+SEG V LF GL + +D VPA+AT ++ D TWTF ++ F NG PV AQ+FI GWNRVA SDV+Y ++AGIEG+ +++AG
Sbjct: 28 DNSGNSGGSGAGKNGGTFRMGITEPVAIDPYNAQESEGILVTDNLFTGLYEPTADGQVVPALATSKKASSDGKTWTFTIKKGTKFTNGEPVDAQAFIRGWNRVAQKSAASDVAY---HMAGIEGFDEIQAG 155
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: A0A7K3M7G7_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Phytoactinopolyspora mesophila TaxID=2650750 RepID=A0A7K3M7G7_9ACTN) HSP 1 Score: 99.8 bits (247), Expect = 6.480e-22 Identity = 61/134 (45.52%), Postives = 74/134 (55.22%), Query Frame = 1
Query: 1 DTDGES-----DGETDGGGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLN-AVPAVATDWSTDDNVTWTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIEGWGDVEAG 384
D DGE D + GG T EP ++ N+ + G V LF GLT + + A VATDW TDDNVTWTFNLRDD TFHNG+PVTAQ+F D WN V +PDN S ++ G+ DV G
Sbjct: 26 DDDGEPGADAPDEAAEAGGEFTAYTCEPQFLVPGNSTEVCGSMVLEQLFSGLTAVNYETSEAYGVVATDWDTDDNVTWTFNLRDDFTFHNGDPVTAQTFADTWNWVVDPDNAQQNS---NFFDNFVGYADVVEG 156
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Match: UPI0006933DCE (peptide ABC transporter substrate-binding protein n=1 Tax=Streptomyces sp. NRRL S-118 TaxID=1463881 RepID=UPI0006933DCE) HSP 1 Score: 98.6 bits (244), Expect = 1.710e-21 Identity = 55/126 (43.65%), Postives = 76/126 (60.32%), Query Frame = 1
Query: 10 GESDGETDGGGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYGSDLNAVPAVATDWST-DDNVTWTFNLRDDVTFHNGNPVTAQSFIDGWNRVANPDNLSDVSYQGSYIAGIEGWGDVEAG 384
G+ + GGG GI EPT ID +N Q+SEG VA LF GL ++ VPA+A +T DD TWTF ++ F NG PV A++F+ GW RVA+ + SDV+Y ++AGI+G+ D+ G
Sbjct: 26 GDEGSNSKGGGVFRLGITEPTAIDPYNAQESEGMLVAHNLFTGLYKVKANGELVPALAESATTSDDGKTWTFKIKAGTKFTNGEPVDAEAFVRGWTRVASKASASDVAY---HMAGIQGYADLNGG 148 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109268.1937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109268.1937.1 >prot_M-pyrifera_M_contig109268.1937.1 ID=prot_M-pyrifera_M_contig109268.1937.1|Name=mRNA_M-pyrifera_M_contig109268.1937.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp DTDGESDGETDGGGSLTYGIVEPTWIDSFNTQDSEGFEVARLLFDGLTDYback to top mRNA from alignment at M-pyrifera_M_contig109268:219..602+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109268.1937.1 ID=mRNA_M-pyrifera_M_contig109268.1937.1|Name=mRNA_M-pyrifera_M_contig109268.1937.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig109268:219..602+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109268:219..602+ >mRNA_M-pyrifera_M_contig109268.1937.1 ID=mRNA_M-pyrifera_M_contig109268.1937.1|Name=mRNA_M-pyrifera_M_contig109268.1937.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig109268:219..602+ (Macrocystis pyrifera P11B4 male)back to top |