mRNA_M-pyrifera_M_contig106787.1455.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: A0A1I3V614_9GAMM (ABC transporter n=2 Tax=Methylophaga sulfidovorans TaxID=45496 RepID=A0A1I3V614_9GAMM) HSP 1 Score: 209 bits (531), Expect = 8.770e-66 Identity = 97/172 (56.40%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALK 516 G+I +DGTDI QIDP DLR+ +G+ QD LFYG+ RENITM AP+ D EVL+ A I+G F+ +HP+G+DMP+GE G+G+SGGQ Q++ +AR+LLL P+++ DEPT+AMDNS+E+ F + E KTLLLVTHK S+L +VDR+IV+ G IVADG +E++L+ALK Sbjct: 10 GSILLDGTDIRQIDPVDLRKNVGYAPQDVVLFYGSIRENITMVAPFAEDHEVLKAADIAGVTEFVNRHPSGFDMPVGERGEGLSGGQRQSVAVARALLLDSPVIMLDEPTNAMDNSTEERFKAKLAENVENKTLLLVTHKASLLSLVDRVIVMDQGHIVADGPREQILTALK 181
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: A0A2E3MIY7_9GAMM (Type I secretion system permease/ATPase n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MIY7_9GAMM) HSP 1 Score: 222 bits (565), Expect = 3.370e-65 Identity = 103/185 (55.68%), Postives = 147/185 (79.46%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALKQLQQKKSPSEVGD 555 GAI++DGTDI+QIDPADLRR +G+VQQ+P++F+G+ R+NI ++APWV D E+LR A+ +GA +FIG P G+D IGE G G+SGGQ Q I +AR+LL+SP IMLFDEP+S+MDNS+E F++N + + KT +LVTHK+ +L +V R++VLQHGKI+ADG K++VL L+Q++ ++S E + Sbjct: 543 GAIKIDGTDISQIDPADLRRNLGYVQQEPKVFFGSVRDNIAVRAPWVDDTEILRAAQAAGAYNFIGAMPNGFDALIGENGVGLSGGQIQTITVARALLMSPSIMLFDEPSSSMDNSTEAAFVKNMQETLKDKTAILVTHKIPLLQIVSRILVLQHGKIIADGPKDKVLEFLQQVRNERSNQEQAE 727
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: UPI00112DF6D0 (type I secretion system permease/ATPase n=1 Tax=Methylomonas koyamae TaxID=702114 RepID=UPI00112DF6D0) HSP 1 Score: 219 bits (557), Expect = 3.890e-64 Identity = 103/177 (58.19%), Postives = 140/177 (79.10%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALKQLQQK 531 GA+ +DGTDI Q+DPADLRRQIG+V QD L YG+ ++NIT+ + + D++VLR A+I+G D+F+ KHPAG+D+ +GEGG +SGGQ Q+I +AR+L+LSPPI + DEPT+AMDNSSE+ F + F +G+TL+LVTH+MS+L +VDRLIV+ G IVADG K+ VL AL+Q Q K Sbjct: 537 GAVLIDGTDIRQLDPADLRRQIGYVPQDISLLYGSVKDNITLGSGFADDQQVLRAARIAGVDAFVNKHPAGFDLQVGEGGANLSGGQRQSIALARALVLSPPIFVLDEPTNAMDNSSEEGFKQRFAAELQGQTLILVTHRMSLLSLVDRLIVMDGGHIVADGPKDHVLEALRQGQIK 713
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: A0A3D1CKF9_9GAMM (Type I secretion system permease/ATPase (Fragment) n=1 Tax=Methylophaga sp. TaxID=2024840 RepID=A0A3D1CKF9_9GAMM) HSP 1 Score: 201 bits (512), Expect = 2.250e-62 Identity = 91/172 (52.91%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALK 516 GA+ +D TD+ QIDP DLRR +G+V QD LFYG+ R+NI + AP+ D VLR A+I+G FI +HP+G+DMP+GE G+G+SGGQ Q+I +AR+LLL PP+++ DEPT++MDNSSE+ F + + K+L+LVTH+ S+L +VDR++V+ G +VADG +E++L+ALK Sbjct: 48 GAVLLDETDLRQIDPIDLRRSVGYVPQDVMLFYGSVRDNIALGAPFADDAAVLRAAEIAGVTEFINRHPSGFDMPVGERGEGLSGGQRQSIAVARALLLDPPVLVLDEPTNSMDNSSEERFKTKLGEIIKDKSLILVTHRASLLSLVDRVLVMDQGNLVADGPREQILAALK 219
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: UPI00034CD0C3 (ATP-binding cassette domain-containing protein n=1 Tax=Methylophaga lonarensis TaxID=999151 RepID=UPI00034CD0C3) HSP 1 Score: 206 bits (525), Expect = 2.560e-62 Identity = 90/172 (52.33%), Postives = 134/172 (77.91%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALK 516 GA+ +DGTD+ QIDP DLRR +G+ QD LFYG+ R+NI + AP+ D+ +L+ A+++G F+ +HP+G+DM +GE G+G+SGGQ Q+I +AR+LL+ PP+++ DEPT+AMDNS+E+ F T+ E KTLLLVTH+ S+L +VDR+IV+ GK+VADG +E++++ALK Sbjct: 209 GAVLLDGTDLRQIDPVDLRRSVGYAPQDVVLFYGSVRDNIAIGAPYADDQAILKAAELAGVTEFVNRHPSGFDMQVGERGEGLSGGQRQSIAVARALLMDPPMLVLDEPTNAMDNSTEERFKSKLTQVLENKTLLLVTHRASLLSLVDRIIVMDQGKLVADGPREQIMTALK 380
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: A0A1Y5DQK9_9GAMM (ABC transporter n=3 Tax=unclassified Methylophaga TaxID=2629249 RepID=A0A1Y5DQK9_9GAMM) HSP 1 Score: 210 bits (534), Expect = 6.890e-61 Identity = 95/172 (55.23%), Postives = 133/172 (77.33%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALK 516 GAI +DGTDI Q+DP DLRR +G+ QD LF+G+ R+NI + AP+ D VL+ A+I+G F+ +HP+G+DMP+GE G+G+SGGQ Q++ +AR+LLL PP+++ DEPT+AMDNS+E+ F +GKTLL+VTHK S+L +VDR+IVL G++VADG +E+VLSALK Sbjct: 523 GAILLDGTDIRQVDPVDLRRNVGYAPQDVVLFFGSIRDNIALGAPFADDNAVLKAAEITGVSEFVNRHPSGFDMPVGERGEGLSGGQRQSVAVARALLLDPPVLVLDEPTNAMDNSTEESFKTKLAGMLDGKTLLIVTHKASLLSLVDRIIVLDQGRLVADGPREQVLSALK 694
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: C0N3R0_9GAMM (ABC transporter, ATP-binding protein n=1 Tax=Methylophaga thiooxydans DMS010 TaxID=637616 RepID=C0N3R0_9GAMM) HSP 1 Score: 204 bits (520), Expect = 9.490e-61 Identity = 92/172 (53.49%), Postives = 134/172 (77.91%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALK 516 GAI +DGTDI Q+DP DLRR +G+ QD LF+G+ R+NITM AP+ D+ VL+ A ++G F+ +HP+G+DMP+GE G+G+SGGQ Q++ +AR+LLL P +++ DEPT+AMDNS+E+ F +++ + KTLLLVTHK S+L +VDR+IV+ G +VADG +E++L+ALK Sbjct: 286 GAILLDGTDIRQVDPVDLRRSVGYAPQDVVLFFGSIRDNITMVAPFADDKMVLKAADVAGVSEFVNRHPSGFDMPVGERGEGLSGGQRQSVAVARALLLDPSVVVLDEPTNAMDNSTEERFKAKLSESLKEKTLLLVTHKASLLSLVDRIIVMDQGHLVADGPREQILAALK 457
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: A0A661DGQ9_9GAMM (Type I secretion system permease/ATPase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A661DGQ9_9GAMM) HSP 1 Score: 209 bits (532), Expect = 1.720e-60 Identity = 97/172 (56.40%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALK 516 GAI +DGTDI QIDP DLR+ IG+ QD LF+G+ R+NI + P+ D++VL AKI+G F+ +HP+G+DMP+GE G+G+SGGQ Q++ +AR+LLL P +++ DEPT+AMDNS+E+ F EN + KTLLLVTHK S+L +VDRLIVL G++VADG +E+VL ALK Sbjct: 541 GAILLDGTDIRQIDPVDLRKNIGYAPQDVVLFFGSIRDNIALGKPFAADDDVLHAAKIAGVTEFVNRHPSGFDMPVGERGEGLSGGQRQSVAVARALLLEPSVLVLDEPTNAMDNSTEEVFKENLVETLADKTLLLVTHKASLLSLVDRLIVLDQGQLVADGPREQVLEALK 712
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: A0A369CBV9_9GAMM (ATP-binding cassette subfamily C protein LapB n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369CBV9_9GAMM) HSP 1 Score: 209 bits (532), Expect = 1.870e-60 Identity = 99/173 (57.23%), Postives = 133/173 (76.88%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALKQ 519 GA+R+DG D+ QIDPADLRR G+V QD LFYG+ R+NI + AP+ D EVLRVA++SG F+ +PAG+DM +GE G+ +SGGQ QAI IAR+LLL PPI+L DEPT++MDN++E+ F + GKT++LVTH+ S+L +VDR++V+ G+IVADG KE+VL ALKQ Sbjct: 548 GAVRIDGIDLRQIDPADLRRNTGYVPQDTLLFYGSVRDNIRLGAPFADDREVLRVAELSGVTDFVNLNPAGFDMMVGERGETLSGGQRQAIAIARALLLEPPILLLDEPTNSMDNTTEEQFKTRMVQVLAGKTVVLVTHRASLLNLVDRIVVMDSGRIVADGPKEQVLEALKQ 720
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Match: A0A4S1E5J8_9BURK (ATP-binding cassette domain-containing protein (Fragment) n=1 Tax=Alcaligenaceae bacterium 429 TaxID=2562948 RepID=A0A4S1E5J8_9BURK) HSP 1 Score: 196 bits (498), Expect = 2.250e-60 Identity = 95/173 (54.91%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 1 GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEEVLRVAKISGADSFIGKHPAGYDMPIGEGGQGISGGQCQAICIARSLLLSPPIMLFDEPTSAMDNSSEQWFMENFTKAFEGKTLLLVTHKMSILGMVDRLIVLQHGKIVADGSKERVLSALKQ 519 G + VDG DI QIDPADLRR +GFV QDP LFYGT + N+TM AP+ +DEE+L A+ISG D F +HP GYDM I E G+ +SGGQ Q+I +AR++L P ++L DEP+S MDN SE KT++LVTH+ ++L +VDRLIV+ +G+IVADG KE+V++ALK+ Sbjct: 37 GTVLVDGIDIRQIDPADLRRSMGFVSQDPVLFYGTLKHNLTMGAPYASDEEMLAAARISGVDQFASRHPDGYDMIISERGESLSGGQRQSIAVARAVLNRPSVLLLDEPSSHMDNQSEMALRSRLKNICVDKTVILVTHRTALLDLVDRLIVMDNGRIVADGPKEQVVTALKE 209 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106787.1455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106787.1455.1 >prot_M-pyrifera_M_contig106787.1455.1 ID=prot_M-pyrifera_M_contig106787.1455.1|Name=mRNA_M-pyrifera_M_contig106787.1455.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp GAIRVDGTDIAQIDPADLRRQIGFVQQDPRLFYGTARENITMKAPWVTDEback to top mRNA from alignment at M-pyrifera_M_contig106787:57..617- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106787.1455.1 ID=mRNA_M-pyrifera_M_contig106787.1455.1|Name=mRNA_M-pyrifera_M_contig106787.1455.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=561bp|location=Sequence derived from alignment at M-pyrifera_M_contig106787:57..617- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106787:57..617- >mRNA_M-pyrifera_M_contig106787.1455.1 ID=mRNA_M-pyrifera_M_contig106787.1455.1|Name=mRNA_M-pyrifera_M_contig106787.1455.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1122bp|location=Sequence derived from alignment at M-pyrifera_M_contig106787:57..617- (Macrocystis pyrifera P11B4 male)back to top |