mRNA_M-pyrifera_M_contig105569.1196.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Match: A0A024GBD5_9STRA (Uncharacterized protein n=7 Tax=Albugo candida TaxID=65357 RepID=A0A024GBD5_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.100e-8 Identity = 36/111 (32.43%), Postives = 53/111 (47.75%), Query Frame = 1 Query: 19 FHEERSLRSGKSRRSFWGATDLACSPHDATLLVTGVATGRLMAWNTEAVGRRRFAKTVA----------------GHSRHVTRVTFHPGERGHVLSSSLDGTVRLWDVRGR 303 F E+R+LR+GKS +F D+ P LL T G ++ WN + G + T GH R V R+ +HP + ++S S DGT++LWD RG+ Sbjct: 56 FSEKRNLRAGKSSLNF-STNDIRWHPQSNHLLATAATNGVVVIWNLQKDGYKHVQGTFCDRNRHCIDSVSERVLNGHRRAVNRICWHPTDWNLLVSGSQDGTIKLWDKRGK 165
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Match: A0A0P4W776_SCYOL (GATOR complex protein WDR24 n=4 Tax=Portunidae TaxID=6757 RepID=A0A0P4W776_SCYOL) HSP 1 Score: 60.8 bits (146), Expect = 1.480e-8 Identity = 31/93 (33.33%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 25 EERSLRSGKSRRSFWGATDLACSPHDATLLVTGVATGRLMAWNTEAVGRRRFAKTVAGHSRHVTRVTFHPGERGHVLSSSLDGTVRLWDVRGR 303 E +LR+GK + D+ +P + +L T G ++ WN R + HSR V +V+FHP E ++S SLDG ++L+D+R R Sbjct: 44 ERANLRAGKHLNLNFSCNDVVWNPLEDAVLATASTNGAVVTWNLNKASRSKLDCVFNDHSRTVQKVSFHPSEAHLLISGSLDGFMKLFDLRRR 136
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Match: A0A8J4YPV0_CHIOP (GATOR complex protein WDR24 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4YPV0_CHIOP) HSP 1 Score: 60.1 bits (144), Expect = 2.780e-8 Identity = 32/95 (33.68%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 19 FHEERSLRSGKSRRSFWGATDLACSPHDATLLVTGVATGRLMAWNTEAVGRRRFAKTVAGHSRHVTRVTFHPGERGHVLSSSLDGTVRLWDVRGR 303 F E +LR+GK + D+ +P + ++L T G ++ WN R + HSR V +V+FHP E ++S SLDG ++L+D+R R Sbjct: 43 FVERANLRAGKHLNLNFSCNDVVWNPVEDSVLATASTNGAVVTWNLNKSTRSKLDCVFNDHSRTVQKVSFHPTEAHLLISGSLDGFMKLFDLRRR 137
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Match: A0A6A6U554_9PEZI (WD40 repeat-like protein n=1 Tax=Microthyrium microscopicum TaxID=703497 RepID=A0A6A6U554_9PEZI) HSP 1 Score: 58.9 bits (141), Expect = 5.940e-8 Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 1 Query: 109 LLVTGVATGRLMAWNTEAVGRRRFAKTVAGHSRHVTRVTFHPGERGHVLSSSLDGTVRLWDVRGR 303 L+ TG A +L WN E + +++ + GH + V RV F+P + S SLDGTVR+WDVR + Sbjct: 53 LVATGAANNKLRVWNPERA-QVKYSTDLRGHDKSVERVVFNPLREAELASCSLDGTVRIWDVRSK 116
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Match: Q756Z9_ASHGO (Coronin n=1 Tax=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) TaxID=284811 RepID=Q756Z9_ASHGO) HSP 1 Score: 50.4 bits (119), Expect = 6.530e-5 Identity = 32/88 (36.36%), Postives = 41/88 (46.59%), Query Frame = 1 Query: 79 DLACSPHDATLLVTGVATGRLMAW----------------NTEAVGRRRFAKTVAGHSRHVTRVTFHPGERGHVLSSSLDGTVRLWDV 294 D P D +LV+G GR+ W N E V +F + GH R V V +HP +G + SSSLD TVRLW+V Sbjct: 86 DTDFDPFDERMLVSGSDDGRIGVWEIPATYSFHNAQDEDGNVEHVAPVKF---LTGHQRKVGHVLYHPTAQGVLASSSLDHTVRLWNV 170
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Match: UPI00193A6CD1 (uncharacterized protein LOC120327688 isoform X1 n=3 Tax=Styela clava TaxID=7725 RepID=UPI00193A6CD1) HSP 1 Score: 50.4 bits (119), Expect = 6.880e-5 Identity = 20/47 (42.55%), Postives = 31/47 (65.96%), Query Frame = 1 Query: 172 RRFAKTVAGHSRHVTRVTFHPGERGHVLSSSLDGTVRLWDVRGRGKD 312 ++ K+++GH R VTFHPG + + SL+G VR+WD+RG G + Sbjct: 95 KKLVKSLSGHERSPWCVTFHPGSNEILATGSLNGEVRVWDLRGEGSE 141
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Match: A0A2D4CCV7_PYTIN (FHA domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCV7_PYTIN) HSP 1 Score: 50.1 bits (118), Expect = 8.720e-5 Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 1 Query: 82 LACSPH-DATLLVTGVATGRLMAWNTEAVGRRRFAK---------TVAGHSRHVTRVTFHPGERGHVLSSSLDGTVRLWDVRGR 303 L+ SP D L+ TG + +++ E V FAK GH+ VT +HP +R V+SSSLDGTVR+WD+ + Sbjct: 304 LSYSPSGDRLLVATGSSQPKIL--TREGVEELHFAKGDMYVVEMANTNGHTHTVTGAMWHPSQRETVISSSLDGTVRIWDLNAK 385
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Match: A0A0A9AJQ6_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9AJQ6_ARUDO) HSP 1 Score: 48.1 bits (113), Expect = 9.750e-5 Identity = 24/72 (33.33%), Postives = 34/72 (47.22%), Query Frame = 1 Query: 82 LACSPHDATLLVTGVATGRLMAWNTEAVGRRRFAKTVAGHSRHVTRVTFHPGERGHVLSSSLDGTVRLWDVR 297 L C ++L+ G + L W+ G + HS +T +HP H+LSSS DG V LWD+R Sbjct: 10 LDCGGEGSSLIAAGGSDPALRVWDPRKPGSLAPIFQFSSHSSWITACKWHPSSWFHLLSSSFDGKVMLWDLR 81 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105569.1196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105569.1196.1 >prot_M-pyrifera_M_contig105569.1196.1 ID=prot_M-pyrifera_M_contig105569.1196.1|Name=mRNA_M-pyrifera_M_contig105569.1196.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp SESRLEFHEERSLRSGKSRRSFWGATDLACSPHDATLLVTGVATGRLMAWback to top mRNA from alignment at M-pyrifera_M_contig105569:253..570+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105569.1196.1 ID=mRNA_M-pyrifera_M_contig105569.1196.1|Name=mRNA_M-pyrifera_M_contig105569.1196.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig105569:253..570+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105569:253..570+ >mRNA_M-pyrifera_M_contig105569.1196.1 ID=mRNA_M-pyrifera_M_contig105569.1196.1|Name=mRNA_M-pyrifera_M_contig105569.1196.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig105569:253..570+ (Macrocystis pyrifera P11B4 male)back to top |