mRNA_M-pyrifera_M_contig105548.1191.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: A0A518E383_9BACT (Yop-YscD_cpl domain-containing protein n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518E383_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 5.110e-17 Identity = 40/80 (50.00%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 10 LFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEFLVRIGTQKNKR 249 +++IG+A DCDLVL D +FP+VH YL L + +R LG P VNG V L D D +RTGPYEF V IG Q R Sbjct: 45 VYLIGSASDCDLVLADPQFPDVHVYLYLKPDEVTMRVLGEGPVAAVNGEPVLTARLHDGDHLRTGPYEFCVHIGAQPGPR 124
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: UPI001CCF5F79 (FHA domain-containing protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCF5F79) HSP 1 Score: 79.0 bits (193), Expect = 1.030e-16 Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 4 SPLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEF 216 SP+F +G+ DCDLVLGDD+FPE+ AY+L H LR L +P +TVN V L + DRIR GPYEF Sbjct: 19 SPVFTLGSGHDCDLVLGDDQFPELFAYILRTHDGYRLRCLADEPVLTVNAEDVVATRLENGDRIRCGPYEF 89
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: A0A2G2L3M7_9BACT (Yop-YscD_cpl domain-containing protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2L3M7_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 3.530e-16 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 4 SPLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEFLVRIGTQKN 243 +P+F+IG+A DCDLVLGD +FPE + Y+ + H + LR + P+++VNG ++ L D D IR GP+EF + IG + + Sbjct: 82 APVFVIGSATDCDLVLGDPQFPECYTYIYVQHSAVSLRKMPGGPDLSVNGVVLEQTLLHDGDWIRCGPFEFRISIGVKNS 161
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: A0A2S8FAH2_9BACT (Yop-YscD_cpl domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8FAH2_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 5.890e-16 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 7 PLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEF 216 P+F +G+A DCDLVLGD++FPE++AY+L H LR L +P +TVN + L D DRIR GPYEF Sbjct: 56 PVFTLGSAGDCDLVLGDEQFPELYAYILRTHDGYRLRCLVAEPILTVNAEDMVIKQLEDGDRIRCGPYEF 125
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: A0A2S8FS70_9BACT (Yop-YscD_cpl domain-containing protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A2S8FS70_9BACT) HSP 1 Score: 77.4 bits (189), Expect = 6.490e-16 Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 4 SPLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEF 216 S +FM+G++ +CDLVLGDD+FPE++AY+L G LR L +P +TVN L D DRIR GPYEF Sbjct: 41 SSVFMLGSSDECDLVLGDDQFPELYAYILRTDGGYQLRCLAAEPVLTVNAEDALLSHLEDGDRIRCGPYEF 111
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: A0A2S8GE42_9BACT (Yop-YscD_cpl domain-containing protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GE42_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 2.570e-15 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 4 SPLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEF 216 S +FM+G++ +CDLVLGD++FPE++AYLL LR L ++P +TVN L D DRIR GPYEF Sbjct: 41 SSVFMLGSSSECDLVLGDEQFPELYAYLLRTDEGYQLRCLAVEPVLTVNSEDTLVARLEDGDRIRCGPYEF 111
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: A0A518C5P4_9BACT (Yop-YscD_cpl domain-containing protein n=2 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C5P4_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 3.270e-15 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 7 PLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEF 216 P+F +G+A DCDL+LGD +FPE++AY+L H LR L +P +TVN L + DRIR GPYEF Sbjct: 56 PVFTLGSASDCDLILGDQQFPELYAYILRTHDGYRLRCLTAEPILTVNAEDTVVAQLENGDRIRCGPYEF 125
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: UPI00199500E4 (Uncharacterized protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=UPI00199500E4) HSP 1 Score: 72.0 bits (175), Expect = 1.240e-13 Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 7 PLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEFLVRI 228 P+F+IG A DCDLVLGD RFPE +AYL + + +R LG PE+ VNG + L D D + G YEF + I Sbjct: 51 PVFLIGAAEDCDLVLGDVRFPEAYAYLYVTVRGVSVRHLGDGPELNVNGELTESALLTDGDILELGAYEFQLHI 124
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: A0A368KMP0_9BACT (Yop-YscD_cpl domain-containing protein n=1 Tax=Blastopirellula cremea TaxID=1031537 RepID=A0A368KMP0_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 2.220e-13 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 4 SPLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEF 216 S ++M+G+ +CDLVLGDD+FPE++AY+L + +R L +P +TVN L + DRIR GPYEF Sbjct: 41 SSVYMLGSGSECDLVLGDDQFPELYAYILRTNEGYQIRCLDAEPVLTVNAEDTLLCRLNNGDRIRCGPYEF 111
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Match: D2R5X6_PIRSD (Yop-YscD_cpl domain-containing protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) TaxID=530564 RepID=D2R5X6_PIRSD) HSP 1 Score: 71.2 bits (173), Expect = 2.840e-13 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 4 SPLFMIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDHVSLRDMDRIRTGPYEF-LVRIGTQK 240 SP+F+IG+A DCDLVLGD FP+ +AYL L + +R+LG P++ VN V+ L DR+ G +EF L I T K Sbjct: 49 SPVFLIGSASDCDLVLGDKSFPDAYAYLYLNASGISIRYLGEGPQLLVNDQPVEGSPLAVGDRLEMGIFEFRLAEIHTSK 128 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105548.1191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105548.1191.1 >prot_M-pyrifera_M_contig105548.1191.1 ID=prot_M-pyrifera_M_contig105548.1191.1|Name=mRNA_M-pyrifera_M_contig105548.1191.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp MIGTAPDCDLVLGDDRFPEVHAYLLLGHGPLLLRWLGIDPEITVNGAQVDback to top mRNA from alignment at M-pyrifera_M_contig105548:2..253+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105548.1191.1 ID=mRNA_M-pyrifera_M_contig105548.1191.1|Name=mRNA_M-pyrifera_M_contig105548.1191.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig105548:2..253+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105548:2..253+ >mRNA_M-pyrifera_M_contig105548.1191.1 ID=mRNA_M-pyrifera_M_contig105548.1191.1|Name=mRNA_M-pyrifera_M_contig105548.1191.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig105548:2..253+ (Macrocystis pyrifera P11B4 male)back to top |