mRNA_M-pyrifera_M_contig105526.1184.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A7S4IUN4_9EUKA (Rab GDP dissociation inhibitor n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IUN4_9EUKA) HSP 1 Score: 247 bits (631), Expect = 3.490e-78 Identity = 122/159 (76.73%), Postives = 139/159 (87.42%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWE--EGATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 LLEKRRFKKFLE+ +SWE GA KG++ A M ++FKKFSLDD+T+DF+GHA+ALHLNDDYL +PAGPTL KV+LYFESLAR+LKSPY+YPLYGLGELPQAFARLSAIYGGTYML+ PIDEIIMEGGK GV+S EVAKA+ VIGDPSYFPD VK Sbjct: 133 LLEKRRFKKFLEFTSSWEPTSGANYKGVDPNKATMKELFKKFSLDDSTVDFTGHAIALHLNDDYLNEPAGPTLMKVRLYFESLARHLKSPYIYPLYGLGELPQAFARLSAIYGGTYMLDMPIDEIIMEGGKFAGVRSGKEVAKAQLVIGDPSYFPDLVK 291
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: UPI000C6FC36D (rab GDP dissociation inhibitor alpha-like n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6FC36D) HSP 1 Score: 206 bits (525), Expect = 4.720e-65 Identity = 102/159 (64.15%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 + EKRRF+KFL +V +++E T +G++ T M DV+KKF L + IDF+GHALAL+ DDYL P T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+MEGG +GVKSEGEVA+ K +I DPSY PD+V+ Sbjct: 3 MFEKRRFRKFLVFVANFDENDPKTFEGVDPKTTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDVPCLDTVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEGGHVIGVKSEGEVARCKQLICDPSYIPDRVR 161
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: UPI00112769F9 (rab GDP dissociation inhibitor alpha isoform X2 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112769F9) HSP 1 Score: 210 bits (535), Expect = 1.200e-64 Identity = 105/159 (66.04%), Postives = 126/159 (79.25%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 + EKRRF++FL YV ++ E T +G++ AT M DV+KKF L + IDF+GHALAL+ DDYL QP T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+ME GK +GVKSEGEVA+ K VI DPSY PD+V+ Sbjct: 134 MFEKRRFRRFLVYVANFAEDDPKTFEGVDPATTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEEGKVIGVKSEGEVARCKRVICDPSYVPDRVR 292
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A7S2EY31_9EUKA (Rab GDP dissociation inhibitor (Fragment) n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2EY31_9EUKA) HSP 1 Score: 206 bits (525), Expect = 2.470e-64 Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 1 Query: 7 EKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 EKRR KKF +V ++ E T G + A+ M +VFKKFSL D+T+DF GHALALH +DDYL QPA T+ +++LY +SLA++ KSP+LYP+YGLG+LPQAFARLSAIY GT+MLNKPIDEI+ME G VGVKSEGEVA+ KFVIGDPSYF +KVK Sbjct: 1 EKRRCKKFFMFVQNYSEDDPKTHNGFDLASIPMVEVFKKFSLSDDTVDFIGHALALHRDDDYLNQPAKDTIDRIRLYCDSLAKHSKSPFLYPMYGLGDLPQAFARLSAIYRGTFMLNKPIDEIVMEDGVVVGVKSEGEVARCKFVIGDPSYFQNKVK 157
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A7N5P0H9_AILME (Rab GDP dissociation inhibitor n=2 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=A0A7N5P0H9_AILME) HSP 1 Score: 207 bits (527), Expect = 5.110e-64 Identity = 101/159 (63.52%), Postives = 126/159 (79.25%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 + EKRRF+KFL YV +++E T +G++ M +V+++F L + IDF+GHALAL+ DDYL QP T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+MEGGK +GVKSEGEVA+ K +I DPSY PD+V+ Sbjct: 1 MFEKRRFRKFLVYVANFDENDSKTLEGVDPHVTTMREVYRRFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEGGKVIGVKSEGEVARCKQLICDPSYVPDRVR 159
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A669F3H0_ORENI (Rab GDP dissociation inhibitor n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A669F3H0_ORENI) HSP 1 Score: 209 bits (532), Expect = 5.360e-64 Identity = 103/159 (64.78%), Postives = 126/159 (79.25%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 + EKRRF+KFL +V +++E T +G++ T M DV+KKF L + IDF+GHALAL+ DDYL P T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+MEGGK +GVKSEGEVA+ K +I DPSY PD+V+ Sbjct: 65 MFEKRRFRKFLVFVANFDENDPKTFEGVDPKTTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDVPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEGGKVIGVKSEGEVARCKQLICDPSYIPDRVR 223
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A6A1QB38_BALPH (Rab GDP dissociation inhibitor (Fragment) n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A6A1QB38_BALPH) HSP 1 Score: 206 bits (524), Expect = 1.090e-63 Identity = 102/159 (64.15%), Postives = 126/159 (79.25%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 + EKRRF+KFL +V +++E T +G++ +M DV++KF L + IDF+GHALAL+ DDYL QP T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+D+IIME GK VGVKSEGEVA+ K +I DPSY PD+V+ Sbjct: 84 MFEKRRFRKFLVFVANFDENDAKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPDRVR 242
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A670ZP19_PSETE (Rab GDP dissociation inhibitor n=4 Tax=Elapidae TaxID=8602 RepID=A0A670ZP19_PSETE) HSP 1 Score: 208 bits (530), Expect = 2.410e-63 Identity = 103/159 (64.78%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 L EKRRF+KFL YV +++E T +G++ M D++KKF L + IDF+GHALAL+ DDYL QP T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKPI+EI++E GK VGVKSEGE+A+ K +I DPSY PD+VK Sbjct: 135 LFEKRRFRKFLVYVANFDENDARTFEGVDPKRTTMRDIYKKFDLGQDVIDFTGHALALYRTDDYLDQPCQETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIVIENGKVVGVKSEGEIARCKQLICDPSYIPDRVK 293
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: UPI001BB25839 (rab GDP dissociation inhibitor beta-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB25839) HSP 1 Score: 209 bits (532), Expect = 2.680e-63 Identity = 100/159 (62.89%), Postives = 127/159 (79.87%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 + EKRRFK FL YV +EE +T KG++ M +++KK+ LD+NT F GHA+ALH +D+Y+K+P T+ ++KLY +SLARY KSPY+YPLYGLGELPQ FARLSAIYGGTYML+KPI+EI++E GK VGVKS+GE AK K VIGDPSYFPD+V+ Sbjct: 133 IFEKRRFKSFLNYVVDFEEENPSTFKGVDPDKTTMTELYKKYGLDENTQGFVGHAMALHRDDEYIKRPCKETILRIKLYIDSLARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLDKPIEEIVIEEGKVVGVKSQGETAKCKMVIGDPSYFPDRVE 291
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A8B9JAB7_ASTMX (Rab GDP dissociation inhibitor n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9JAB7_ASTMX) HSP 1 Score: 206 bits (523), Expect = 2.820e-63 Identity = 100/159 (62.89%), Postives = 126/159 (79.25%), Query Frame = 1 Query: 1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 471 + EKRRF+KFL +V +++E T +G++ M +V+KKF L + IDF+GHALAL+ DDYL+QP T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+MEGG +GVKSEGE+A+ K +I DPSY PD+V+ Sbjct: 58 MFEKRRFRKFLVFVANFDENDPKTFEGVDPKQTTMGEVYKKFDLGQDVIDFTGHALALYRTDDYLEQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEGGHVIGVKSEGEIARCKQLICDPSYIPDRVR 216 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105526.1184.1 >prot_M-pyrifera_M_contig105526.1184.1 ID=prot_M-pyrifera_M_contig105526.1184.1|Name=mRNA_M-pyrifera_M_contig105526.1184.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp LLEKRRFKKFLEYVTSWEEGATCKGLNTATANMYDVFKKFSLDDNTIDFSback to top mRNA from alignment at M-pyrifera_M_contig105526:1..632+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105526.1184.1 ID=mRNA_M-pyrifera_M_contig105526.1184.1|Name=mRNA_M-pyrifera_M_contig105526.1184.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=632bp|location=Sequence derived from alignment at M-pyrifera_M_contig105526:1..632+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105526:1..632+ >mRNA_M-pyrifera_M_contig105526.1184.1 ID=mRNA_M-pyrifera_M_contig105526.1184.1|Name=mRNA_M-pyrifera_M_contig105526.1184.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig105526:1..632+ (Macrocystis pyrifera P11B4 male)back to top |