prot_M-pyrifera_M_contig105526.1184.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig105526.1184.1
Unique Name	prot_M-pyrifera_M_contig105526.1184.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	157

Homology

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A7S4IUN4_9EUKA (Rab GDP dissociation inhibitor n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IUN4_9EUKA)

HSP 1 Score: 247 bits (631), Expect = 3.490e-78
Identity = 122/159 (76.73%), Postives = 139/159 (87.42%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWE--EGATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            LLEKRRFKKFLE+ +SWE   GA  KG++   A M ++FKKFSLDD+T+DF+GHA+ALHLNDDYL +PAGPTL KV+LYFESLAR+LKSPY+YPLYGLGELPQAFARLSAIYGGTYML+ PIDEIIMEGGK  GV+S  EVAKA+ VIGDPSYFPD VK
Sbjct:  133 LLEKRRFKKFLEFTSSWEPTSGANYKGVDPNKATMKELFKKFSLDDSTVDFTGHAIALHLNDDYLNEPAGPTLMKVRLYFESLARHLKSPYIYPLYGLGELPQAFARLSAIYGGTYMLDMPIDEIIMEGGKFAGVRSGKEVAKAQLVIGDPSYFPDLVK 291

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: UPI000C6FC36D (rab GDP dissociation inhibitor alpha-like n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6FC36D)

HSP 1 Score: 206 bits (525), Expect = 4.720e-65
Identity = 102/159 (64.15%), Postives = 125/159 (78.62%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            + EKRRF+KFL +V +++E    T +G++  T  M DV+KKF L  + IDF+GHALAL+  DDYL  P   T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+MEGG  +GVKSEGEVA+ K +I DPSY PD+V+
Sbjct:    3 MFEKRRFRKFLVFVANFDENDPKTFEGVDPKTTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDVPCLDTVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEGGHVIGVKSEGEVARCKQLICDPSYIPDRVR 161

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: UPI00112769F9 (rab GDP dissociation inhibitor alpha isoform X2 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112769F9)

HSP 1 Score: 210 bits (535), Expect = 1.200e-64
Identity = 105/159 (66.04%), Postives = 126/159 (79.25%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            + EKRRF++FL YV ++ E    T +G++ AT  M DV+KKF L  + IDF+GHALAL+  DDYL QP   T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+ME GK +GVKSEGEVA+ K VI DPSY PD+V+
Sbjct:  134 MFEKRRFRRFLVYVANFAEDDPKTFEGVDPATTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEEGKVIGVKSEGEVARCKRVICDPSYVPDRVR 292

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A7S2EY31_9EUKA (Rab GDP dissociation inhibitor (Fragment) n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2EY31_9EUKA)

HSP 1 Score: 206 bits (525), Expect = 2.470e-64
Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 0

Query:    3 EKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            EKRR KKF  +V ++ E    T  G + A+  M +VFKKFSL D+T+DF GHALALH +DDYL QPA  T+ +++LY +SLA++ KSP+LYP+YGLG+LPQAFARLSAIY GT+MLNKPIDEI+ME G  VGVKSEGEVA+ KFVIGDPSYF +KVK
Sbjct:    1 EKRRCKKFFMFVQNYSEDDPKTHNGFDLASIPMVEVFKKFSLSDDTVDFIGHALALHRDDDYLNQPAKDTIDRIRLYCDSLAKHSKSPFLYPMYGLGDLPQAFARLSAIYRGTFMLNKPIDEIVMEDGVVVGVKSEGEVARCKFVIGDPSYFQNKVK 157

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A7N5P0H9_AILME (Rab GDP dissociation inhibitor n=2 Tax=Ailuropoda melanoleuca TaxID=9646 RepID=A0A7N5P0H9_AILME)

HSP 1 Score: 207 bits (527), Expect = 5.110e-64
Identity = 101/159 (63.52%), Postives = 126/159 (79.25%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            + EKRRF+KFL YV +++E    T +G++     M +V+++F L  + IDF+GHALAL+  DDYL QP   T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+MEGGK +GVKSEGEVA+ K +I DPSY PD+V+
Sbjct:    1 MFEKRRFRKFLVYVANFDENDSKTLEGVDPHVTTMREVYRRFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEGGKVIGVKSEGEVARCKQLICDPSYVPDRVR 159

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A669F3H0_ORENI (Rab GDP dissociation inhibitor n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A669F3H0_ORENI)

HSP 1 Score: 209 bits (532), Expect = 5.360e-64
Identity = 103/159 (64.78%), Postives = 126/159 (79.25%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            + EKRRF+KFL +V +++E    T +G++  T  M DV+KKF L  + IDF+GHALAL+  DDYL  P   T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+MEGGK +GVKSEGEVA+ K +I DPSY PD+V+
Sbjct:   65 MFEKRRFRKFLVFVANFDENDPKTFEGVDPKTTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDVPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEGGKVIGVKSEGEVARCKQLICDPSYIPDRVR 223

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A6A1QB38_BALPH (Rab GDP dissociation inhibitor (Fragment) n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A6A1QB38_BALPH)

HSP 1 Score: 206 bits (524), Expect = 1.090e-63
Identity = 102/159 (64.15%), Postives = 126/159 (79.25%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            + EKRRF+KFL +V +++E    T +G++    +M DV++KF L  + IDF+GHALAL+  DDYL QP   T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+D+IIME GK VGVKSEGEVA+ K +I DPSY PD+V+
Sbjct:   84 MFEKRRFRKFLVFVANFDENDAKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPDRVR 242

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A670ZP19_PSETE (Rab GDP dissociation inhibitor n=4 Tax=Elapidae TaxID=8602 RepID=A0A670ZP19_PSETE)

HSP 1 Score: 208 bits (530), Expect = 2.410e-63
Identity = 103/159 (64.78%), Postives = 125/159 (78.62%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            L EKRRF+KFL YV +++E    T +G++     M D++KKF L  + IDF+GHALAL+  DDYL QP   T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKPI+EI++E GK VGVKSEGE+A+ K +I DPSY PD+VK
Sbjct:  135 LFEKRRFRKFLVYVANFDENDARTFEGVDPKRTTMRDIYKKFDLGQDVIDFTGHALALYRTDDYLDQPCQETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEIVIENGKVVGVKSEGEIARCKQLICDPSYIPDRVK 293

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: UPI001BB25839 (rab GDP dissociation inhibitor beta-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB25839)

HSP 1 Score: 209 bits (532), Expect = 2.680e-63
Identity = 100/159 (62.89%), Postives = 127/159 (79.87%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            + EKRRFK FL YV  +EE   +T KG++     M +++KK+ LD+NT  F GHA+ALH +D+Y+K+P   T+ ++KLY +SLARY KSPY+YPLYGLGELPQ FARLSAIYGGTYML+KPI+EI++E GK VGVKS+GE AK K VIGDPSYFPD+V+
Sbjct:  133 IFEKRRFKSFLNYVVDFEEENPSTFKGVDPDKTTMTELYKKYGLDENTQGFVGHAMALHRDDEYIKRPCKETILRIKLYIDSLARYGKSPYIYPLYGLGELPQGFARLSAIYGGTYMLDKPIEEIVIEEGKVVGVKSQGETAKCKMVIGDPSYFPDRVE 291

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BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Match: A0A8B9JAB7_ASTMX (Rab GDP dissociation inhibitor n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9JAB7_ASTMX)

HSP 1 Score: 206 bits (523), Expect = 2.820e-63
Identity = 100/159 (62.89%), Postives = 126/159 (79.25%), Query Frame = 0

Query:    1 LLEKRRFKKFLEYVTSWEEG--ATCKGLNTATANMYDVFKKFSLDDNTIDFSGHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELPQAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPSYFPDKVK 157
            + EKRRF+KFL +V +++E    T +G++     M +V+KKF L  + IDF+GHALAL+  DDYL+QP   T+ ++KLY ESLARY KSPYLYPLYGLGELPQ FARLSAIYGGTYMLNKP+DEI+MEGG  +GVKSEGE+A+ K +I DPSY PD+V+
Sbjct:   58 MFEKRRFRKFLVFVANFDENDPKTFEGVDPKQTTMGEVYKKFDLGQDVIDFTGHALALYRTDDYLEQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDEIVMEGGHVIGVKSEGEIARCKQLICDPSYIPDRVR 216

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig105526.1184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S4IUN4_9EUKA	3.490e-78	76.73	Rab GDP dissociation inhibitor n=1 Tax=Vannella sp...	[more]
UPI000C6FC36D	4.720e-65	64.15	rab GDP dissociation inhibitor alpha-like n=1 Tax=...	[more]
UPI00112769F9	1.200e-64	66.04	rab GDP dissociation inhibitor alpha isoform X2 n=...	[more]
A0A7S2EY31_9EUKA	2.470e-64	65.61	Rab GDP dissociation inhibitor (Fragment) n=1 Tax=...	[more]
A0A7N5P0H9_AILME	5.110e-64	63.52	Rab GDP dissociation inhibitor n=2 Tax=Ailuropoda ...	[more]
A0A669F3H0_ORENI	5.360e-64	64.78	Rab GDP dissociation inhibitor n=3 Tax=Euteleostom...	[more]
A0A6A1QB38_BALPH	1.090e-63	64.15	Rab GDP dissociation inhibitor (Fragment) n=3 Tax=...	[more]
A0A670ZP19_PSETE	2.410e-63	64.78	Rab GDP dissociation inhibitor n=4 Tax=Elapidae Ta...	[more]
UPI001BB25839	2.680e-63	62.89	rab GDP dissociation inhibitor beta-like n=1 Tax=L...	[more]
A0A8B9JAB7_ASTMX	2.820e-63	62.89	Rab GDP dissociation inhibitor n=2 Tax=Astyanax me...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018203	GDP dissociation inhibitor	PRINTS	PR00891	RABGDIREP	coord: 77..94 score: 61.31 coord: 95..116 score: 86.04 coord: 3..18 score: 53.12
IPR018203	GDP dissociation inhibitor	PFAM	PF00996	GDI	coord: 1..157 e-value: 3.3E-71 score: 240.1
IPR018203	GDP dissociation inhibitor	PANTHER	PTHR11787	RAB GDP-DISSOCIATION INHIBITOR	coord: 2..157
IPR000806	Rab GDI protein	PRINTS	PR00892	RABGDI	coord: 48..62 score: 70.14 coord: 144..157 score: 51.3
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 71..157 e-value: 3.2E-32 score: 113.9
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 2..153
None	No IPR available	PANTHER	PTHR11787:SF3	RAB GDP DISSOCIATION INHIBITOR ALPHA	coord: 2..157

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig105526	contig	M-pyrifera_M_contig105526:1..632 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig105526.1184.1	mRNA_M-pyrifera_M_contig105526.1184.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig105526 1..632 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig105526.1184.1 ID=prot_M-pyrifera_M_contig105526.1184.1|Name=mRNA_M-pyrifera_M_contig105526.1184.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp
LLEKRRFKKFLEYVTSWEEGATCKGLNTATANMYDVFKKFSLDDNTIDFS
GHALALHLNDDYLKQPAGPTLAKVKLYFESLARYLKSPYLYPLYGLGELP
QAFARLSAIYGGTYMLNKPIDEIIMEGGKAVGVKSEGEVAKAKFVIGDPS
YFPDKVK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018203	GDP_dissociation_inhibitor
IPR000806	RabGDI
IPR036188	FAD/NAD-bd_sf