mRNA_M-pyrifera_M_contig105475.1173.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105475.1173.1 vs. uniprot
Match: A0A2R5GV26_9STRA (Transmembrane protein 180 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV26_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.170e-24 Identity = 64/132 (48.48%), Postives = 88/132 (66.67%), Query Frame = 1 Query: 19 GLIVSASFFLPHVGTVLLTPAIRARGLYAVLRSVFRFRLALLGVGGLAALWGYMNGQGIVPAAAVAAAFMLANRTVSELVCRLSPLILADLVDEDRVLHRRNRGLAASIVGSAAFASKFSQSAAPAMGFFVL 414 G I+SASF LP VG ++LTPA++ G+YAV++ + RLA GV L G G + AA F+L+NR +SE +CR+ PLI++DLVDEDR LH+R ++A+IVG++AF K SQS AP +GF L Sbjct: 337 GAIISASFVLPWVGMLVLTPAVQRNGVYAVVQGILAARLAWCGVSALL-------GPG-ARSPHFAAWFLLSNRVMSEAICRICPLIISDLVDEDRYLHKRRESVSATIVGASAFMGKVSQSLAPMLGFHAL 460
BLAST of mRNA_M-pyrifera_M_contig105475.1173.1 vs. uniprot
Match: A0A7S1HG37_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HG37_HEMAN) HSP 1 Score: 82.4 bits (202), Expect = 1.800e-15 Identity = 56/139 (40.29%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 16 RGLIVSASFFLPHVGTVLLTPAIRARGLYAVLRSVFRFRLALLGVGGLAALWGYMNGQGIVPAAAVAAAFMLANRTVSELVCRLSPLILADLVDEDRVLHRRNRGLAASIVGSAAFASKFSQSAAPAMGFFVLGTYGGE 432 R LI+S SF LP + T+LL PA+ G+ +V+ + F ++ LLGV LA G I AF + R +E VCRL PL+L+DLVDED+VLH R R ++A +G+ +F +K +S AP +G+ ++ + GG+ Sbjct: 317 RSLIISTSFVLPWIVTILLAPAVSRFGVRSVIIASFCLKV-LLGVIALAV--GLKRPLFI-------GAFAVMTRVFTECVCRLGPLVLSDLVDEDKVLHSRARTMSAMFIGTNSFFTKPGESLAPMLGWAIVNSGGGQ 445
BLAST of mRNA_M-pyrifera_M_contig105475.1173.1 vs. uniprot
Match: A0A0L0DG70_THETB (Transmembrane protein 180 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DG70_THETB) HSP 1 Score: 80.1 bits (196), Expect = 1.240e-14 Identity = 53/138 (38.41%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 1 LSAWLRGLIVSASFFLPHVGTVLLTPAIRARGLYAVLRSVFRFRLALLGVGGLAALWGYMNGQGIVPAAAVAAAFMLANRTVSELVCRLSPLILADLVDEDRVLHRRNRGLAASIVGSAAFASKFSQSAAPAMGFFVL 414 +SA R ++V+AS+ LPHV T++ + G Y V+R++FR R+ L LA + G AA +F++ NR V+E CRL + LAD+VDE+ + +R L+A I G+ AF +K +QS APA+G++ L Sbjct: 258 VSASARAMLVTASYVLPHVFTIVSGALVARHGAYLVIRALFRARVGLGVAAWLAVALPALGGT--TTAAVCLGSFVVLNRLVTEGTCRLMNVALADVVDEEAAVAKRATPLSALIFGTNAFVTKPAQSLAPALGWYFL 393
BLAST of mRNA_M-pyrifera_M_contig105475.1173.1 vs. uniprot
Match: A0A7S0F397_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F397_9CRYP) HSP 1 Score: 78.6 bits (192), Expect = 3.820e-14 Identity = 50/138 (36.23%), Postives = 81/138 (58.70%), Query Frame = 1 Query: 1 LSAWLRGLIVSASFFLPHVGTVLLTPAIRARGLYAVLRSVFRFRLALLGVGGLAALWGYMNGQGIVPAAAVAAAFMLANRTVSELVCRLSPLILADLVDEDRVLHRRNRGLAASIVGSAAFASKFSQSAAPAMGFFVL 414 LS R LI+S SF LP + T+L+ P + G++ +L+ F +L L + A GY + I F +A R ++E VCR SP++LADL DED+ LH R++ ++A+++G+ A +K +S AP +G+ +L Sbjct: 211 LSRKTRSLIISTSFILPWLTTILVGPFVNKHGVHRLLQIAFSLKLTLSMI---ALCVGYKHQIFI-------GLFAVATRVLTECVCRQSPMVLADLADEDKYLHIRDKSMSATVMGTNALFTKPGESLAPMLGWAIL 338
BLAST of mRNA_M-pyrifera_M_contig105475.1173.1 vs. uniprot
Match: A0A7S3CYF3_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYF3_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 6.730e-12 Identity = 51/161 (31.68%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 16 RGLIVSASFFLPHVGTVLLTPAIRARGLYAVLRSVFRFRLALLGVGGLAALWGYMNGQGIVPAAA----------------------------VAAAFMLANRTVSELVCRLSPLILADLVDEDRVLHRRNRGLAASIVGSAAFASKFSQSAAPAMGFFVL 414 R L+V+ SF +PH+ T+L P + +G+YAV+R+ + L+ ++ Y+ I P AA A F+L+ R ++E CRLSPL+L+D+VDEDRV ++R + A+I+GS++F K + S AP +G+ ++ Sbjct: 405 RSLVVALSFAMPHLSTILTEPIQKRKGVYAVVRA------QTIAKAFLSVVFAYLLSAYIFPPAADSSSXXXXXXXXXXXXXPPLMRSASFGYAVAFFLLSARIMTESNCRLSPLLLSDIVDEDRVKNKRKISMGAAIIGSSSFLVKPAVSIAPMLGWALI 559
BLAST of mRNA_M-pyrifera_M_contig105475.1173.1 vs. uniprot
Match: L1JD68_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JD68_GUITC) HSP 1 Score: 57.8 bits (138), Expect = 7.430e-7 Identity = 45/138 (32.61%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 1 LSAWLRGLIVSASFFLPHVGTVLLTPAIRARGLYAVLRSVFRFRLALLGVGGLAALWGYMNGQGIVPAAAVAAAFMLANRTVSELVCRLSPLILADLVDEDRVLHRRNRGLAASIVGSAAFASKFSQSAAPAMGFFVL 414 LS R LI+S SF LP + T+L+ P + G+Y +L+ F +L L V A GY + I F +A R ++E VCR +D+ LH R+R ++A+++G+ A +K +S AP +G+ +L Sbjct: 263 LSRKTRSLIISTSFILPWLTTILVGPFVNKHGVYRLLQIAFTLKLMLSMV---ALCIGYKHQVFI-------GLFAVATRVLTECVCR-----------QDKYLHIRDRSMSATVMGTNALFTKPGESLAPMLGWAIL 379
BLAST of mRNA_M-pyrifera_M_contig105475.1173.1 vs. uniprot
Match: A0A7S4CDP4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CDP4_9EUGL) HSP 1 Score: 55.5 bits (132), Expect = 8.180e-7 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 232 ANRTVSELVCRLSPLILADLVDEDRVLHRRNRGLAASIVGSAAFASKFSQSAAPAMGFFVL 414 ANR +SE VCR+ PL++ADL+DED LH R +++ G A +K QS AP G++VL Sbjct: 1 ANRILSECVCRMIPLVIADLIDEDYALHNRKVTMSSMYFGCHALFTKPGQSLAPMFGWWVL 61 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105475.1173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105475.1173.1 >prot_M-pyrifera_M_contig105475.1173.1 ID=prot_M-pyrifera_M_contig105475.1173.1|Name=mRNA_M-pyrifera_M_contig105475.1173.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp LSAWLRGLIVSASFFLPHVGTVLLTPAIRARGLYAVLRSVFRFRLALLGVback to top mRNA from alignment at M-pyrifera_M_contig105475:5..469+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105475.1173.1 ID=mRNA_M-pyrifera_M_contig105475.1173.1|Name=mRNA_M-pyrifera_M_contig105475.1173.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig105475:5..469+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105475:5..469+ >mRNA_M-pyrifera_M_contig105475.1173.1 ID=mRNA_M-pyrifera_M_contig105475.1173.1|Name=mRNA_M-pyrifera_M_contig105475.1173.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig105475:5..469+ (Macrocystis pyrifera P11B4 male)back to top |