mRNA_M-pyrifera_M_contig105465.1171.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105465.1171.1
Unique NamemRNA_M-pyrifera_M_contig105465.1171.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A3D5DGD8_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGD8_9GAMM)

HSP 1 Score: 375 bits (963), Expect = 7.980e-128
Identity = 186/211 (88.15%), Postives = 199/211 (94.31%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGDH 633
            EQAYQ+YLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYA+VTACSTGAHCISNAARMIERGD+DVMIAGG+EFATSYTGLGGFASAKALSTRND PE ASRPWD +RDGFVLS+GAGIVV+EELEHA +RGARIYAEL G+GMSSDA+HITAPS DGEGAAYCMELA  DAG+   +V YINAHGTSTPAGDKAE+DAVKRFFGDH
Sbjct:  115 EQAYQAYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYALVTACSTGAHCISNAARMIERGDVDVMIAGGSEFATSYTGLGGFASAKALSTRNDAPEQASRPWDLERDGFVLSEGAGIVVLEELEHAERRGARIYAELLGAGMSSDAFHITAPSTDGEGAAYCMELAIKDAGLRKEDVDYINAHGTSTPAGDKAESDAVKRFFGDH 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A523P129_9PROT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P129_9PROT)

HSP 1 Score: 375 bits (963), Expect = 8.240e-128
Identity = 184/211 (87.20%), Postives = 200/211 (94.79%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGDH 633
            E+AYQSYLDGG RKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCI++AARMIER D+DVMIAGGAEFATSYTGLGGFASAKALSTRNDDPE ASRPWD +RDGFVLSDGAGI+V+EE+E+A++RGARIYAELAGSGMSSDAYHITAP+PDGEGAA+CMELA  DA  +  +V YINAHGTSTPAGDKAETDAVKR+FGDH
Sbjct:  116 EKAYQSYLDGGPRKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCIASAARMIERDDVDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEGASRPWDSERDGFVLSDGAGIIVLEEMEYAKRRGARIYAELAGSGMSSDAYHITAPTPDGEGAAHCMELAVADAEFNRDDVDYINAHGTSTPAGDKAETDAVKRYFGDH 326
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A7C5PS12_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5PS12_9GAMM)

HSP 1 Score: 331 bits (849), Expect = 1.940e-110
Identity = 163/211 (77.25%), Postives = 185/211 (87.68%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGDH 633
            EQAY++YL GG RK+SPFFVP NIINMV+GNLSI YG KGPN ++V+AC+TG H I +A RMI+ G +DVM+AGGAE ATS TGLGGFA+A+ALSTRNDDP+AASRPWDRDRDGFVLSDGAG+VV+EELEHAR RGARIYAEL GSGM+SDAYH+T+PSP GEGAA CM+LA  DAGID  +V YINAHGTSTPAGD AET AVKR FGDH
Sbjct:  120 EQAYEAYLKGGPRKISPFFVPANIINMVSGNLSIMYGLKGPNLSLVSACATGTHAIGDAMRMIQYGTVDVMVAGGAEMATSPTGLGGFAAARALSTRNDDPQAASRPWDRDRDGFVLSDGAGVVVLEELEHARARGARIYAELIGSGMNSDAYHMTSPSPGGEGAAECMQLALEDAGIDPEQVDYINAHGTSTPAGDVAETKAVKRAFGDH 330
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A3M1DKY3_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DKY3_9GAMM)

HSP 1 Score: 330 bits (845), Expect = 6.920e-110
Identity = 162/210 (77.14%), Postives = 181/210 (86.19%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGD 630
            EQ YQ++LDGG RK+SPFFVP NIINMV+GNLSIRYGFKGPNYA+VTAC+TG HCI +AAR I  G+ DVMIAGG+E ATS TGLGGF +A+ALSTRNDDP+ ASRPWDRDRDGFVL DG G++V+EELEHAR+RGARIYAELAG GMS+DAYHITAPS DGEGAA CM LA  DAG+    V YINAHGTSTPAGD AET AVKR FG+
Sbjct:  117 EQGYQAFLDGGPRKISPFFVPSNIINMVSGNLSIRYGFKGPNYAIVTACATGTHCIGDAARKIRYGEADVMIAGGSEMATSPTGLGGFCAARALSTRNDDPQRASRPWDRDRDGFVLGDGGGVLVLEELEHARRRGARIYAELAGFGMSADAYHITAPSEDGEGAARCMALALEDAGLGPDAVDYINAHGTSTPAGDVAETQAVKRLFGE 326
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A1S9D3Z6_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9D3Z6_9GAMM)

HSP 1 Score: 321 bits (822), Expect = 1.980e-106
Identity = 151/203 (74.38%), Postives = 180/203 (88.67%), Query Frame = 1 
Query:   25 DGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGDH 633
            DGG +K+SPF++P NIINM+AGNLSI++G +GPN+A+VTACSTG HCI +AAR+IERGD DVM+AGGAE AT+ TGLGGF SA+ALSTRNDDPE ASRPWDRDRDGFVLSDGAG++V+EE EHA++RGARIY E+ G G+++DAYH+TAPSP G+GAA CM+LA  DA IDA+E+ YINAHGTSTPAGDKAETDAVK  F DH
Sbjct:  124 DGGPKKISPFYIPSNIINMIAGNLSIKFGLRGPNFAIVTACSTGTHCIGDAARIIERGDADVMVAGGAEMATTPTGLGGFCSARALSTRNDDPETASRPWDRDRDGFVLSDGAGVIVLEEYEHAKRRGARIYVEVTGYGINADAYHMTAPSPGGQGAARCMQLALRDAAIDANEIDYINAHGTSTPAGDKAETDAVKLVFKDH 326
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A7C1YF59_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Sedimenticola sp. TaxID=1940285 RepID=A0A7C1YF59_9GAMM)

HSP 1 Score: 316 bits (810), Expect = 1.380e-104
Identity = 158/211 (74.88%), Postives = 179/211 (84.83%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGDH 633
            E +Y  YL GG RK+SPFFVP NIINMVAGNLSI +G KGPN ++V+ACSTG+H I  AARMI+ G +DVM+AGGAE ATS TGLGGFA+A+ALSTRNDDPE ASRPWDRDRDGFVLSDGAG+VV+EELEHA KRGA IYAELAG GM+SDA+H+TAPSP+GEGA+ CM LA  D G++  EV YINAHGTSTPAGD AET AVK  FGDH
Sbjct:  116 ENSYGDYLKGGPRKISPFFVPSNIINMVAGNLSIMHGLKGPNISIVSACSTGSHNIGEAARMIQYGGVDVMVAGGAEMATSPTGLGGFAAARALSTRNDDPEGASRPWDRDRDGFVLSDGAGVVVLEELEHALKRGATIYAELAGVGMNSDAFHMTAPSPNGEGASECMLLALEDGGVNPDEVDYINAHGTSTPAGDLAETQAVKAAFGDH 326
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A7Z0VJV0_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=7 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7Z0VJV0_9GAMM)

HSP 1 Score: 315 bits (806), Expect = 5.400e-104
Identity = 157/211 (74.41%), Postives = 178/211 (84.36%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGDH 633
            E +YQ+YLDGG RK+SPFFVP +IINMV+GNLSI YG KGPNY++V+ACS+GAH I+ AA MI  G  DVMIAGGAE ATS  GLGGFA+A+ALS RNDDP+ ASRPWD+DRDGFVLSDGAG+VV+EE E A+ RGA+IYAELAG GM+SDAYH+TAPS DG GAA CMELA  D GI+  EV YINAHGTSTPAGD AET AVKR FGDH
Sbjct:  116 ENSYQAYLDGGPRKISPFFVPSSIINMVSGNLSIMYGLKGPNYSIVSACSSGAHSIAEAAMMIRHGRTDVMIAGGAEMATSPVGLGGFAAARALSRRNDDPQGASRPWDKDRDGFVLSDGAGVVVLEEYEQAKARGAKIYAELAGIGMNSDAYHMTAPSVDGSGAAKCMELALQDGGINVDEVDYINAHGTSTPAGDVAETMAVKRAFGDH 326
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A3B1AUS1_9ZZZZ (3-oxoacyl-[acyl-carrier-protein] synthase, KASII n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1AUS1_9ZZZZ)

HSP 1 Score: 313 bits (802), Expect = 2.250e-103
Identity = 155/211 (73.46%), Postives = 178/211 (84.36%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGDH 633
            E ++  YL GG RK+SPFFVP NIINMVAGNLSI +G KGPN ++V+ACSTG H I  AARMI  G +D M+AGGAE ATS TGLGGFA+A+ALSTRNDDP+ ASRPWDRDRDGFVLSDGAG++VIEE+E A+KRGA+IYAEL G GM+SDAYH+T+PSP+GEGAA CM LA  DAG++A EV YINAHGTSTPAGD AET AVK  FGDH
Sbjct:  116 ENSFGDYLRGGPRKISPFFVPSNIINMVAGNLSIMHGLKGPNISIVSACSTGTHNIGEAARMIRYGGVDAMVAGGAEMATSPTGLGGFAAARALSTRNDDPQGASRPWDRDRDGFVLSDGAGVIVIEEMECAKKRGAKIYAELIGVGMNSDAYHMTSPSPNGEGAAQCMRLALQDAGVNAEEVDYINAHGTSTPAGDLAETQAVKAAFGDH 326
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A2E2D420_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=8 Tax=root TaxID=1 RepID=A0A2E2D420_9GAMM)

HSP 1 Score: 313 bits (801), Expect = 3.090e-103
Identity = 155/210 (73.81%), Postives = 174/210 (82.86%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGD 630
            E  Y SYL+GG RK+SPFFVP NIINM++GNLSI YG KGPN A+VTACSTG HCIS A RMI+ GD DVMIAGGAE ATS TGLGGFA+A+ALSTRNDDP AASRPWD+DRDGFVL DGAG++V+EE EHA KRGA IYAEL GSGMSSDAYH+T+PS  GEGAA CM  A  DAG++   + YINAHGTSTPAGD AET A+K+  GD
Sbjct:  116 EAGYDSYLNGGPRKISPFFVPSNIINMISGNLSIMYGMKGPNTAIVTACSTGTHCISAAGRMIQYGDADVMIAGGAEMATSKTGLGGFAAARALSTRNDDPAAASRPWDKDRDGFVLGDGAGVIVLEEYEHAVKRGATIYAELVGSGMSSDAYHMTSPSEGGEGAARCMVNAIKDAGLNPEAIDYINAHGTSTPAGDAAETQAIKKALGD 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Match: A0A7C5J8L5_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5J8L5_9GAMM)

HSP 1 Score: 313 bits (801), Expect = 3.090e-103
Identity = 154/211 (72.99%), Postives = 175/211 (82.94%), Query Frame = 1 
Query:    1 EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACSTGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDDPEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSSDAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAETDAVKRFFGDH 633
            E+ Y SYL GG RK+SPFF+P NIINM++GNLSI YG KGPN A+VTACS+  HCI +AAR+IE GD DVM+AGGAE ATS TGLGGF SA+ALSTRNDDP+ ASRPWDRDRDGFVLSDGAGIVV+EELEHAR+RGARIYAE+ G GMS DA+H+TAP PDG+GA  CM  A  +AGI    + YINAHGTSTPAGD AET A+K  FGDH
Sbjct:  117 EKGYDSYLKGGPRKISPFFIPSNIINMLSGNLSIMYGMKGPNIAIVTACSSATHCIGDAARLIEYGDADVMVAGGAEMATSPTGLGGFCSARALSTRNDDPQGASRPWDRDRDGFVLSDGAGIVVLEELEHARRRGARIYAEIIGYGMSGDAHHMTAPPPDGDGARRCMVNAMRNAGIAPDAIDYINAHGTSTPAGDIAETRAIKSAFGDH 327
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105465.1171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DGD8_9GAMM7.980e-12888.153-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]
A0A523P129_9PROT8.240e-12887.203-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]
A0A7C5PS12_9GAMM1.940e-11077.253-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]
A0A3M1DKY3_9GAMM6.920e-11077.143-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]
A0A1S9D3Z6_9GAMM1.980e-10674.383-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]
A0A7C1YF59_9GAMM1.380e-10474.883-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]
A0A7Z0VJV0_9GAMM5.400e-10474.413-oxoacyl-[acyl-carrier-protein] synthase 2 n=7 Ta... [more]
A0A3B1AUS1_9ZZZZ2.250e-10373.463-oxoacyl-[acyl-carrier-protein] synthase, KASII n... [more]
A0A2E2D420_9GAMM3.090e-10373.813-oxoacyl-[acyl-carrier-protein] synthase 2 n=8 Ta... [more]
A0A7C5J8L5_9GAMM3.090e-10372.993-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105465contigM-pyrifera_M_contig105465:2..634 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score321.6
Seed ortholog evalue2.7e-85
Seed eggNOG ortholog1049564.TevJSym_bc00170
Preferred namefabF
KEGG rclassRC00039,RC02728,RC02729,RC02888
KEGG koko:K09458
KEGG ReactionR04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119
KEGG Pathwayko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212
KEGG ModuleM00083,M00572
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033817,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576
EggNOG free text desc.Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
EggNOG OGs1J5M1@118884,1MU1X@1224,1RMDE@1236,COG0304@1,COG0304@2
EC2.3.1.179
COG Functional cat.I
BiGG ReactioniAF1260.b1095,iAPECO1_1312.APECO1_176,iB21_1397.B21_01099,iBWG_1329.BWG_0943,iE2348C_1286.E2348C_1187,iEC042_1314.EC042_1165,iEC55989_1330.EC55989_1207,iECABU_c1320.ECABU_c13085,iECBD_1354.ECBD_2506,iECB_1328.ECB_01091,iECDH10B_1368.ECDH10B_1167,iECDH1ME8569_1439.ECDH1ME8569_1030,iECD_1391.ECD_01091,iECED1_1282.ECED1_1238,iECH74115_1262.ECH74115_1474,iECIAI1_1343.ECIAI1_1130,iECIAI39_1322.ECIAI39_2066,iECO103_1326.ECO103_1140,iECO111_1330.ECO111_1372,iECO26_1355.ECO26_1428,iECOK1_1307.ECOK1_1202,iECP_1309.ECP_1087,iECS88_1305.ECS88_1109,iECSE_1348.ECSE_1159,iECSF_1327.ECSF_0994,iECSP_1301.ECSP_1396,iECUMN_1333.ECUMN_1270,iECW_1372.ECW_m1203,iECs_1301.ECs1473,iEKO11_1354.EKO11_2739,iETEC_1333.ETEC_1160,iEcDH1_1363.EcDH1_2552,iEcE24377_1341.EcE24377A_1216,iEcSMS35_1347.EcSMS35_2032,iG2583_1286.G2583_1355,iJO1366.b1095,iJR904.b1095,iLF82_1304.LF82_0607,iNRG857_1313.NRG857_05280,iSF_1195.SF1099,iSFxv_1172.SFxv_1251,iS_1188.S1179,iUMN146_1321.UM146_11850,iWFL_1372.ECW_m1203,iY75_1357.Y75_RS05720,iZ_1308.Z1734,ic_1306.c1365
Best tax levelunclassified Gammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons1
Model size633
Cds size633
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815562.816689-CDS-M-pyrifera_M_contig105465:1..6341622815562.816689-CDS-M-pyrifera_M_contig105465:1..634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105465 2..634 +
1692277465.302362-CDS-M-pyrifera_M_contig105465:1..6341692277465.302362-CDS-M-pyrifera_M_contig105465:1..634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105465 2..634 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105465.1171.1prot_M-pyrifera_M_contig105465.1171.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105465 2..634 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105465.1171.1

>prot_M-pyrifera_M_contig105465.1171.1 ID=prot_M-pyrifera_M_contig105465.1171.1|Name=mRNA_M-pyrifera_M_contig105465.1171.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp
EQAYQSYLDGGARKVSPFFVPGNIINMVAGNLSIRYGFKGPNYAMVTACS
TGAHCISNAARMIERGDLDVMIAGGAEFATSYTGLGGFASAKALSTRNDD
PEAASRPWDRDRDGFVLSDGAGIVVIEELEHARKRGARIYAELAGSGMSS
DAYHITAPSPDGEGAAYCMELAATDAGIDASEVQYINAHGTSTPAGDKAE
TDAVKRFFGDH
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mRNA from alignment at M-pyrifera_M_contig105465:2..634+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105465.1171.1 ID=mRNA_M-pyrifera_M_contig105465.1171.1|Name=mRNA_M-pyrifera_M_contig105465.1171.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig105465:2..634+ (Macrocystis pyrifera P11B4 male)
GAACAAGCCTACCAATCCTATCTCGACGGCGGCGCGCGCAAGGTGTCGCC
ATTCTTCGTTCCGGGCAACATCATCAACATGGTTGCCGGTAATCTTTCGA
TCCGTTACGGCTTCAAAGGGCCGAACTACGCCATGGTGACCGCGTGCTCC
ACCGGCGCGCATTGCATTTCCAATGCCGCGCGCATGATTGAGCGCGGTGA
CCTCGACGTGATGATCGCCGGCGGCGCAGAATTCGCCACGAGCTATACGG
GCCTCGGCGGTTTTGCCTCGGCGAAGGCCTTGTCTACCCGTAATGACGAC
CCCGAAGCCGCAAGCCGTCCTTGGGATCGCGATCGCGACGGCTTTGTCCT
CAGCGATGGTGCGGGCATCGTGGTCATCGAAGAACTCGAACACGCGCGCA
AGCGCGGTGCCAGGATTTACGCGGAGCTTGCCGGCTCCGGTATGAGCAGC
GATGCTTATCACATCACCGCGCCGTCACCGGACGGAGAGGGCGCCGCCTA
CTGCATGGAACTGGCTGCAACGGATGCAGGCATCGATGCGAGCGAAGTGC
AATACATCAACGCACACGGCACTTCGACCCCGGCCGGCGACAAAGCTGAA
ACCGACGCCGTGAAGCGGTTTTTCGGCGACCAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig105465:2..634+

>mRNA_M-pyrifera_M_contig105465.1171.1 ID=mRNA_M-pyrifera_M_contig105465.1171.1|Name=mRNA_M-pyrifera_M_contig105465.1171.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig105465:2..634+ (Macrocystis pyrifera P11B4 male)
GAACAAGCCTACCAATCCTATCTCGACGGCGGCGCGCGCAAGGTGTCGCC
ATTCTTCGTTCCGGGCAACATCATCAACATGGTTGCCGGTAATCTTTCGA
TCCGTTACGGCTTCAAAGGGCCGAACTACGCCATGGTGACCGCGTGCTCC
ACCGGCGCGCATTGCATTTCCAATGCCGCGCGCATGATTGAGCGCGGTGA
CCTCGACGTGATGATCGCCGGCGGCGCAGAATTCGCCACGAGCTATACGG
GCCTCGGCGGTTTTGCCTCGGCGAAGGCCTTGTCTACCCGTAATGACGAC
CCCGAAGCCGCAAGCCGTCCTTGGGATCGCGATCGCGACGGCTTTGTCCT
CAGCGATGGTGCGGGCATCGTGGTCATCGAAGAACTCGAACACGCGCGCA
AGCGCGGTGCCAGGATTTACGCGGAGCTTGCCGGCTCCGGTATGAGCAGC
GATGCTTATCACATCACCGCGCCGTCACCGGACGGAGAGGGCGCCGCCTA
CTGCATGGAACTGGCTGCAACGGATGCAGGCATCGATGCGAGCGAAGTGC
AATACATCAACGCACACGGCACTTCGACCCCGGCCGGCGACAAAGCTGAA
ACCGACGCCGTGAAGCGGTTTTTCGGCGACCACGAACAAGCCTACCAATC
CTATCTCGACGGCGGCGCGCGCAAGGTGTCGCCATTCTTCGTTCCGGGCA
ACATCATCAACATGGTTGCCGGTAATCTTTCGATCCGTTACGGCTTCAAA
GGGCCGAACTACGCCATGGTGACCGCGTGCTCCACCGGCGCGCATTGCAT
TTCCAATGCCGCGCGCATGATTGAGCGCGGTGACCTCGACGTGATGATCG
CCGGCGGCGCAGAATTCGCCACGAGCTATACGGGCCTCGGCGGTTTTGCC
TCGGCGAAGGCCTTGTCTACCCGTAATGACGACCCCGAAGCCGCAAGCCG
TCCTTGGGATCGCGATCGCGACGGCTTTGTCCTCAGCGATGGTGCGGGCA
TCGTGGTCATCGAAGAACTCGAACACGCGCGCAAGCGCGGTGCCAGGATT
TACGCGGAGCTTGCCGGCTCCGGTATGAGCAGCGATGCTTATCACATCAC
CGCGCCGTCACCGGACGGAGAGGGCGCCGCCTACTGCATGGAACTGGCTG
CAACGGATGCAGGCATCGATGCGAGCGAAGTGCAATACATCAACGCACAC
GGCACTTCGACCCCGGCCGGCGACAAAGCTGAAACCGACGCCGTGAAGCG
GTTTTTCGGCGACCAC
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