mRNA_M-pyrifera_M_contig10513.1107.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10513.1107.1
Unique NamemRNA_M-pyrifera_M_contig10513.1107.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 2.500e-73
Identity = 118/183 (64.48%), Postives = 139/183 (75.96%), Query Frame = 1 
Query:    1 SRYEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPK-PHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGGKKVHSFPSF 546
            SR+ED+++RMPRSEAAEIEAVV   A+S+CPG+          QACGSYRRGK  CGDVDVLI PPEGQED  +  +L+ +L  +G ITD L     PH PG SQS+MG+ KLPG GR HRRVDIK YPTS++ FAVLYFTGS  FNRSMR+FAK+KGL LSDKGL RVN V G++VH FPS+
Sbjct:  175 SRHEDIMQRMPRSEAAEIEAVVTKVAQSICPGV--------ICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGTGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSY 349
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 3.280e-68
Identity = 116/183 (63.39%), Postives = 138/183 (75.41%), Query Frame = 1 
Query:    1 SRYEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATP-KPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGGKKVHSFPSF 546
            +R+ED+ +RMPRSEAAEIEAVV   A+S+CPG            ACGSYRRGK  CGDVDVLI PPEGQED  +  +L+ +L  +G ITD L     PH+PG SQS+MG+ KLPG+GR HRRVDIK YPTS++ FAVLYFTGS  FNRSMR+FAK+KGL LSDKGL RVN V G++VH FPS+
Sbjct:  651 NRHEDITQRMPRSEAAEIEAVVTRVAQSICPG------------ACGSYRRGKSHCGDVDVLIRPPEGQEDSPVFDDLIKRLVETGFITDKLTLAGSPHKPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSY 821
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 3.230e-63
Identity = 109/177 (61.58%), Postives = 134/177 (75.71%), Query Frame = 1 
Query:    1 SRYEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPK-PHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGGKKV 528
            +R+ED+ +RMPRSEAAEIEA V   A+S+CPG+          QACGSYRRGK  CGDVDVLI PPEGQED  + LEL+ +L  +G ITD LA P+ P+ PG  Q++MGV KLPGEG+ HRR+D+KLYPTSM+ FAVLYFTGSG FN +MR FAK KGL L+DKGL +V+   G++V
Sbjct:  434 NRHEDIKQRMPRSEAAEIEAAVTKVAQSICPGV--------ICQACGSYRRGKSNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGEGQIHRRLDVKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKSKGLKLNDKGLFKVDPFSGEEV 602
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 4.390e-60
Identity = 110/181 (60.77%), Postives = 133/181 (73.48%), Query Frame = 1 
Query:    1 SRYEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVF--SPC--AQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPK-PHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGGKKV 528
            +R+ED+  RMPRSEAAEIEA V   A+S+CPG+     F  SP    +ACGSYRR K  CGDVDVLI PPEGQED S+ LEL+ +L  + LITD LA P+ P+ PG  Q++MGV KLPGEGR HRR+DIKLYP SM+ FAVLYF GSG FN +MR F K KGL L+DKGL +V+   G++V
Sbjct:  394 NRHEDIKPRMPRSEAAEIEAAVTKVAQSICPGVICQASFLTSPRRRTEACGSYRRVKRNCGDVDVLIRPPEGQEDSSMFLELVKELTETRLITDRLAVPEGPYTPGKPQTFMGVCKLPGEGRLHRRLDIKLYPASMFAFAVLYFAGSGDFNMNMRCFGKSKGLKLNDKGLFKVDPFSGEEV 574
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: W4GGX8_9STRA (DNA polymerase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGX8_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.310e-49
Identity = 100/180 (55.56%), Postives = 120/180 (66.67%), Query Frame = 1 
Query:    7 YEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGG-KKVHSFPS 543
            Y+D L ++PRSE  EIE+VV     SL P           A  CGSYRRGK   GDVDVLI  P  Q+DC+IM  LLA L   G +TDDL T + H+ G S SYMGV +L GEGRR+RR+DIK+YP +++GFA LYFTGS  FNRSMR FAKMKG SL+DKGL +  R  G KK+   P+
Sbjct:  448 YDDFLAKIPRSEVQEIESVVKQHVHSLLPRA--------VAITCGSYRRGKSQSGDVDVLISDPT-QDDCNIMPRLLADLHAIGFLTDDLTTVEEHKIGGSDSYMGVCRL-GEGRRYRRIDIKVYPRNLFGFAQLYFTGSDHFNRSMRAFAKMKGYSLTDKGLYKATRSKGVKKLKQGPN 617
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: UPI0008FEC294 (DNA polymerase lambda isoform X2 n=2 Tax=Bathyergidae TaxID=10167 RepID=UPI0008FEC294)

HSP 1 Score: 169 bits (429), Expect = 5.580e-49
Identity = 95/176 (53.98%), Postives = 113/176 (64.20%), Query Frame = 1 
Query:    7 YEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR--VNRVGGKKV 528
            Y D LERMPR EAAEIE  V  AA++L PGL           ACGS+RRGK TCGDVDVL+  P+G+    I   LL KLR+ G +TDDL + + H  G  Q Y+GV +LPG GRRHRR+DI L P S +  A+LYFTGS  FNRSMR  AK KG+SLS+  L+   V    G KV
Sbjct:  105 YSDFLERMPREEAAEIEQTVRVAAQALSPGLL--------CVACGSFRRGKLTCGDVDVLLTHPDGRSHRGIFSRLLDKLRQQGFLTDDLVSQEDH--GQQQKYLGVCQLPGPGRRHRRLDIILVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALRTAVVRGTQGAKV 270
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: UPI001CA968BB (DNA polymerase lambda isoform X2 n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI001CA968BB)

HSP 1 Score: 172 bits (435), Expect = 8.260e-49
Identity = 95/176 (53.98%), Postives = 113/176 (64.20%), Query Frame = 1 
Query:    7 YEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR--VNRVGGKKV 528
            YED LERMPR EA EIE  V  AA SL PGL           ACGSYRRGK TCGDVDVL+  P+GQ    I  +LL  LRRSG +TDDL   +  + G+ + Y+GV +LPG GRRHRR+DI + P   +  A+LYFTGS  FNRSMR  AK KG+SLS+  L    V   GG+K+
Sbjct:  205 YEDFLERMPREEAKEIEQTVREAARSLNPGL--------VCMACGSYRRGKATCGDVDVLVTHPDGQSHRGIFGKLLDSLRRSGFLTDDLV--RQEDSGNQKKYLGVCRLPGPGRRHRRLDIIVVPHCEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALHTAVVRAPGGRKM 370
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: A0A8C0G3I4_CHEAB (DNA polymerase n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0G3I4_CHEAB)

HSP 1 Score: 169 bits (427), Expect = 8.750e-49
Identity = 95/176 (53.98%), Postives = 115/176 (65.34%), Query Frame = 1 
Query:    7 YEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR--VNRVGGKKV 528
            YED LERMPR EAAEIE  V+ AA SL PGL           ACGSYRRGK TCGDVDVL+  P+GQ    I  +LL  LRRSG +TDDL   +  + G+ + Y+GV +LPG GRRHRR+DI + P + +  A+LYFTGS  FN SMR  AK +G+SLS+  L    V   GG+KV
Sbjct:   96 YEDFLERMPREEAAEIEQTVSKAAWSLNPGL--------VCVACGSYRRGKATCGDVDVLVTHPDGQSHRGIFGKLLDSLRRSGFLTDDLVIQE--DSGNQKKYLGVCRLPGPGRRHRRLDIIVAPHAEFACALLYFTGSAYFNCSMRALAKTRGMSLSEHALHTAVVRAPGGRKV 261
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: A0A8D2LGY6_VARKO (DNA polymerase n=5 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2LGY6_VARKO)

HSP 1 Score: 167 bits (424), Expect = 1.730e-48
Identity = 92/176 (52.27%), Postives = 113/176 (64.20%), Query Frame = 1 
Query:    7 YEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR--VNRVGGKKV 528
            YED LERMPR EAAEIE VV  AA+S+ PGL           ACGS+RRGK TCGDVDVL+  P+G     +  +LL  L +SG +TDDL + + +  G  + Y+GV +LPG GRRHRR+DI + P   +  A+LYFTGS  FNRSMR  AK KG+SLS+  L    V R GG K 
Sbjct:   83 YEDFLERMPREEAAEIEQVVREAAQSMNPGL--------VCVACGSFRRGKSTCGDVDVLVTHPDGHSHQGVFKKLLDSLWKSGFLTDDLVSQEDN--GRQKKYLGVCRLPGPGRRHRRLDIIVVPYDEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTGVVRRPGGLKA 248
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BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: UPI00145842E0 (DNA polymerase lambda-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145842E0)

HSP 1 Score: 172 bits (437), Expect = 4.220e-48
Identity = 95/175 (54.29%), Postives = 119/175 (68.00%), Query Frame = 1 
Query:    7 YEDLLERMPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR-VNRVGGKKV 528
            Y+D+L+RMP  EA EIEAVV +AAESL PG+         AQACGSYRR K TCGDVDVL+  P+G+    I  +LL KLR  G +TDDL T +  + G+ + Y+GV KLPGE RRHRR+DI + P   Y  A++YFTGS  FNRS+R+ AK KG+SLS+  L   V R G +KV
Sbjct:  323 YDDILDRMPWVEAGEIEAVVRTAAESLLPGV--------IAQACGSYRRKKTTCGDVDVLVTHPDGKSHRGIFGKLLTKLRDQGFLTDDLVTSE--DDGNQKKYLGVCKLPGENRRHRRLDIIVVPYDEYACALVYFTGSAHFNRSLRHLAKKKGMSLSEHSLNAGVVRNGSEKV 487
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2F8_ECTSI2.500e-7364.48DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JHQ3_9PHAE3.280e-6863.39DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G2F7_ECTSI3.230e-6361.58DNA polymerase lambda n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JQ91_9PHAE4.390e-6060.77DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
W4GGX8_9STRA1.310e-4955.56DNA polymerase n=2 Tax=Aphanomyces astaci TaxID=11... [more]
UPI0008FEC2945.580e-4953.98DNA polymerase lambda isoform X2 n=2 Tax=Bathyergi... [more]
UPI001CA968BB8.260e-4953.98DNA polymerase lambda isoform X2 n=2 Tax=Chelonioi... [more]
A0A8C0G3I4_CHEAB8.750e-4953.98DNA polymerase n=1 Tax=Chelonoidis abingdonii TaxI... [more]
A0A8D2LGY6_VARKO1.730e-4852.27DNA polymerase n=5 Tax=Varanus komodoensis TaxID=6... [more]
UPI00145842E04.220e-4854.29DNA polymerase lambda-like n=1 Tax=Pecten maximus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10513contigM-pyrifera_M_contig10513:723..6598 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.5
Seed ortholog evalue3.1e-55
Seed eggNOG ortholog2880.D7G2F8
Preferred namePOLB
KEGG rclassRC00536
KEGG koko:K01834,ko:K02330,ko:K03512,ko:K10981
KEGG ReactionR01518
KEGG Pathwayko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03410,ko03450,ko04922,ko05166,ko05203,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03410,map03450,map04922,map05166,map05203,map05230
KEGG ModuleM00001,M00002,M00003,M00296
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000724,GO:0000725,GO:0000726,GO:0000793,GO:0000794,GO:0000795,GO:0002200,GO:0002376,GO:0002377,GO:0002440,GO:0002520,GO:0002562,GO:0002566,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003887,GO:0003906,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005819,GO:0005856,GO:0005874,GO:0005876,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006281,GO:0006284,GO:0006285,GO:0006286,GO:0006287,GO:0006288,GO:0006289,GO:0006290,GO:0006302,GO:0006303,GO:0006310,GO:0006464,GO:0006508,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007275,GO:0007431,GO:0007435,GO:0007568,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0008630,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009636,GO:0009653,GO:0009887,GO:0009987,GO:0010033,GO:0010212,GO:0010224,GO:0010332,GO:0012501,GO:0015630,GO:0015631,GO:0016311,GO:0016444,GO:0016445,GO:0016446,GO:0016447,GO:0016579,GO:0016740,GO:0016772,GO:0016779,GO:0016829,GO:0016835,GO:0018130,GO:0019438,GO:0019538,GO:0019899,GO:0022612,GO:0023052,GO:0030145,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033151,GO:0033152,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035272,GO:0035556,GO:0036211,GO:0036296,GO:0042221,GO:0042493,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0045471,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0048513,GO:0048534,GO:0048535,GO:0048536,GO:0048731,GO:0048732,GO:0048856,GO:0048872,GO:0050789,GO:0050794,GO:0050896,GO:0051103,GO:0051402,GO:0051575,GO:0051716,GO:0055093,GO:0065007,GO:0065008,GO:0070013,GO:0070482,GO:0070646,GO:0070647,GO:0070997,GO:0071704,GO:0071707,GO:0071897,GO:0090304,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097510,GO:0098501,GO:0098502,GO:0099080,GO:0099081,GO:0099086,GO:0099512,GO:0099513,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901700
EggNOG free text desc.DNA-directed DNA polymerase activity
EggNOG OGsCOG1796@1,KOG2534@2759
EC2.7.7.7,5.4.2.11
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03400,ko04131,ko04147
Exons4
Model size552
Cds size525
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10513.1107.1prot_M-pyrifera_M_contig10513.1107.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10513 750..6598 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815559.4897075-UTR-M-pyrifera_M_contig10513:722..7491622815559.4897075-UTR-M-pyrifera_M_contig10513:722..749Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10513 723..749 +
1692277463.7181025-UTR-M-pyrifera_M_contig10513:722..7491692277463.7181025-UTR-M-pyrifera_M_contig10513:722..749Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10513 723..749 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815559.515137-CDS-M-pyrifera_M_contig10513:749..8181622815559.515137-CDS-M-pyrifera_M_contig10513:749..818Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10513 750..818 +
1692277463.7299685-CDS-M-pyrifera_M_contig10513:749..8181692277463.7299685-CDS-M-pyrifera_M_contig10513:749..818Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10513 750..818 +
1622815559.5311568-CDS-M-pyrifera_M_contig10513:1213..13271622815559.5311568-CDS-M-pyrifera_M_contig10513:1213..1327Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10513 1214..1327 +
1692277463.7373939-CDS-M-pyrifera_M_contig10513:1213..13271692277463.7373939-CDS-M-pyrifera_M_contig10513:1213..1327Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10513 1214..1327 +
1622815559.5465245-CDS-M-pyrifera_M_contig10513:4480..46561622815559.5465245-CDS-M-pyrifera_M_contig10513:4480..4656Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10513 4481..4656 +
1692277463.748399-CDS-M-pyrifera_M_contig10513:4480..46561692277463.748399-CDS-M-pyrifera_M_contig10513:4480..4656Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10513 4481..4656 +
1622815559.5629387-CDS-M-pyrifera_M_contig10513:6432..65981622815559.5629387-CDS-M-pyrifera_M_contig10513:6432..6598Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10513 6433..6598 +
1692277463.758072-CDS-M-pyrifera_M_contig10513:6432..65981692277463.758072-CDS-M-pyrifera_M_contig10513:6432..6598Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10513 6433..6598 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10513.1107.1

>prot_M-pyrifera_M_contig10513.1107.1 ID=prot_M-pyrifera_M_contig10513.1107.1|Name=mRNA_M-pyrifera_M_contig10513.1107.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDV
DVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGV
IKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLS
LSDKGLQRVNRVGGKKVHSFPSFR*
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mRNA from alignment at M-pyrifera_M_contig10513:723..6598+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10513.1107.1 ID=mRNA_M-pyrifera_M_contig10513.1107.1|Name=mRNA_M-pyrifera_M_contig10513.1107.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5876bp|location=Sequence derived from alignment at M-pyrifera_M_contig10513:723..6598+ (Macrocystis pyrifera P11B4 male)
TCCAGGTACGAGGACCTCCTTGAGCGCATGCCTCGGTCGGAGGCGGCTGA
GATCGAGGCAGTGGTAGCTTCGGCCGCCGAGAGCCTTTGCCCGGGGGTGC
AGTGCCAGGCAAGCTCATTGGCTGCCCCCTCTGGGTGATAAGTGTTATCA
AACCATTGAACCGGCTGGGAGCACCCAGCACTGTAGCAGGGGTAGGATCA
CGTTGCGGCTGTGCCACACGACTCCTTGCATTGCAACCATTGTAACCTGG
ACACCGATTTGCAGCATCCCCTAGCAGCACAGACAGTAGCCGTTGCTGTA
AAATCGTCTTTTCTTTGTACGGTGAATTTTGTCCCTCTGAACTCCCGGGA
GGGTTATGCTCGCTTTGTTGCTGATCAAGCGGAAACGGCACTATATCGCT
GGTCAGGCTGCTACTCTTGCTTAGCTACGCTATGTTGCTGATCAAGCCGA
AACGGCGCTATATTGCTGGTCAGTTTGCTACTTTTGCTTAGCTACGCCCT
AACCCTGTCTTCTCTCCGTGCGCGCAGGCGTGTGGGAGCTATAGGCGTGG
GAAGGAGACGTGCGGTGATGTGGACGTTCTCATCTGTCCACCTGAAGGCC
AGGAGGTATGATACCCCACATTTATACACCTCGAAGATATAGATCATCTC
CGTCATCTACGGACAGATCAGATAGAACATCTTCATCAGATGGAGCACCC
ACCTAGACCCCAGCTGCCGTAATGGCATGCTGTGCAGGACCTGTAGGATA
CAGATCTAACTCCCTGAAGACATGTTCCAGATAAGTTGTACGTACGGGTA
CCACGCGGCAACATAAGCTGAAACGTACTGGCACAGATCAGGAATATAGC
GGTCTTGAGAGATCTAGATCATGAACTGCGAATGACCTGTGGATTATGTG
TCCGAGGTGAGAACTTTTGATATGATACCGTACCCTCCGGGGCGAGGGGG
GGGGGTGACGGTGGCCCGAGGGTGTGTGAAAAAGCCTTCCATTGAAATAT
GAAACCCGTAAAGAGGGGGAGAATAGTGTTGGTAGTCAACAAAAATCGTG
ATTGTTTTTGTTGATGATTGTCAGTATGATTACGAGGTTTCAATCATCAG
TGACCAATCACGAAGGCCGTGACCACTCGATTATTTTAGCTGTGCATGGA
TTTTCGTATGCCATATTACCCGCCACACAAACCAAATAATCAAGCACAAG
TCATGCGTAGTATTCGAGTATTTGTGTTGGTACACCCTTGACAGTTGTAA
GCACGGGCTTGCGCTGGTAGCGGTTCAAGTACCTGGCTGTCGCTTGGAAA
TCAAAGAAGATGCTTGATGTTGGCTGTTACCACTTATGGACTTAAGGCAA
AGCGCAACGTAAAAACCTTCAATCGAATCAACCCCGTTTTTCGTTGTTGA
CTGCCAATACTACAGTATCTACCAGTGGGGGACAGAACCATTTTCAGAAA
TCCCGGAGTGTCAGTATTCTGGGCGTGACGTACCGTTGAGTAGTGCTGGG
GTGCCTTCACGGTTACTTTTTTTGCCCCTTCATCCCGTTTAGTGACTTAG
ACCTTCTTTTTCCTCACCCTCCTGTCACGGGGGACCATAGTAAATAGGAC
CAAATATTGTGAGTAAGAAGAGGAAAATATGTAGATGTTTGTGCGTAGCA
TAGGTCCTATTTACTGTGGTCCCCCGTATTGGTCGTAACTCAGACCCAGG
GTCACATGCTTGTACATTGTAGCCTCTCCTTCCCCCCCTCCCCACAACTG
TGGTTCGTGCCTGCCCTCGTTTTTGTCGCGCGAGGACTCCAGGCCTTTCT
TTCCTCGTCAACTGGCGTCGATATATGCGCATGGCATTCTTCTTAGGGGA
CTGGGGTTGGGGTGTCCTACGAGTGTGATGTATTGATGTATTTTTCTTGT
GCGGTGTGTACTGTACTATTAATTGTATGACGCATGCTGCGGTTGGGATG
TACCTATATGTACACCATTTTCCTGAGGCTCCTCTTTTGGGGAAATCTGT
GTACGAAAAAGTGTACGCTTAACCTTCTTACAGAAAACTGCAGTCCCGTT
TGGTAGACAAATCAGTCAAATTATGAGCAACTTGTCCCCAAAACGGGATG
CTGTAGACGGGTAAATCCAGCCAGGCCTTTGAGGGCAAACTGCAGTCCCA
TTGCGGGAACCTATTGGTTGGACTTGAGAGTCAAGTTAGGTACATGTACA
AACAGTGAGGTACTACTATTGATAAATAAAAAGGGTTGATAAACAGGGCG
ATCCCATCCCATGACCTACTATTACGGGGGACCATAGTAAACAGGACCAA
ATATTGTTCGTAAAAATACCTAAATATATAGTTTTTTATGTACGCCATAG
GTCCTGTTAACTATAGACCCCCGTAGTAGGTTTTTCCCGAAAGAAAATGT
GAAACACGAACGGTATTGGATAGGTCCTGAGTTGAGCTTCTTTGAGCAAA
CTGCAATCAGTTGTTTCTGGGGGGATACACTACTTAGAATTTTAGTGGTT
TGTGCCCAAAACGGAACTGCAGTCCGAAAAGGGTTAAGACAGGCCCCATT
AGTCAGAAAAAAAAATGGCCGAAAAGTGCTACCTCTGTTGTAGCACCCAT
CGTACGTCACTGTCACTGTCACTGGGAATACTGGCAGTACACTGATGAGG
TGTGTAATATTGGAATTCTGGCAGTAGCCTTTGATATTTTCGACGAGCTC
TGGAAACTTGCAACATTTGTGTATCAACCCGGCTTTTGGTCGAACTCACA
CCTACCGTATTTTGATGTTTGGAAATTTTGGTGTGTAAACACACAAGAGG
ATGCAAACCCGGCTGTTTGGGTCCATCGCGTGTTACGATTTTCTACCACT
CTGACCGGAAATATAGGGGATTTTTATACGTAAATATGAATACCAAGCGG
TCCTTATATTGACAGACACCCAGAGTGGTATGTATTTCTGCTGTTACTAC
TAGTTACGGGGACCATAGTAAAGAGGACCTATGGAACACACTAAAACCTT
TATATTTACCTATTTTTACGAACAATATTTGGTCCTATTTACTATGGTCC
CCCGTACTAGCAAAATTACTACATATTAGTACGGCCCCCGGGAACAGTGA
GGTGTGATACTGGGAATACTATTCCTGGCACTACTACCCTTCATACTTCG
ACGATCTCCGGAGAATGGCTGACCGGGGTATGTATCATCAACCGGCTTTT
GGTCGAACTCACATATATTACTTGTAGCGTGTTTTGGGTATTTTGACTGT
CATGCAAGACCTCTCTTCGTTTTTTTCCTGGATCTACTCTTGTCTGTCTG
TCTGTCTGTCTGTCTGTCTGTCCGCCTGTGTGTTCCTTCGGAGACCCCGC
GACCAAAGGCAAGCACACCATTGATGAGGAACAGAACAATCGGAGGCAAA
AAACAAGTTCGTCATTCCCAAGGCCCTTCAAGGGTCATGACCCCAACCCA
CGGGACGGGTCACGAAGTTTTTGTAATGTCATGGGTCGGTCGGGTCGGGT
CGGGTCGGGTCGGGTCGGGAGTCGGGTCAGGAGATTTTCAAATTAGCACG
GATCGGGTCCGGTCACCATTGCACGACCCGACCCAACCTGTGACCCGCGA
CGTGGCTTAACCGGATGCGTGAACCGCCGTGGTTAATAATAGTATGGTAT
TAAATCCGTAATCCAGTTATAGACTATTCCACGCATCGAGACAGATCAGA
CTGCCTTTTTCATGAGATGTAGTGTCATACGTCTGTCCGGTGTCCGGCGT
GATCTCAGGACTGCTCCATAATGCTCGAGCTCCTGGCAAAGCTGAGGCGA
TCGGGGCTGATCACGGATGACTTGGCCACACCCAAGCCGCATGAGCCGGG
GCACTCTCAGAGCTACATGGGCGTCATAAAGCTTCCAGGGGAAGGCCGAC
GACATCGCAGGGTTGACATCAAGCTATATCCCACGTAAGAAGCTGTGGCG
GGGAGGGGGGACAAGGGGGGGGTTGAGATTGAGTTGTTGGGGAAGGTCAG
CATTTCTTGTTTCATCATCTGGCGGATTGGTTAAATGAAGCCAAGCTTGA
TGTGTTAATGTGGGTATATACCATGTCACTGGGATCAACGCGCCTACTCA
TATAGTCGAAACCCCAGCTGTCCTCCAGAATGCTGTCCGAGGCTTCGCTC
GGGAGTATCGGGAGATTACCATGTCCGGATCTCTCCATCAAGCCTTCTCC
TCCATATCCTCCCGGCGGATCTTCCGCGACGGTTTCAGGGAAGGCTCTGC
CGGCTGGTCCTTTGACCCGAGCACCGAAGCAGCAACAGCGACAAATGCTC
GCTCGCCCCGGCTCTAACTTGTCTGATTTTACCTGCTCTTCTCTTGTCCT
GATCCATCTCTTCCTGGAGTATGTCACACTGTCACACTCAGCAACTGGAT
ACCAGGTATAGATCAACAGCAGTAGTAGTAAGGACACTCTGCTCTTCGCA
AGGAGACGTGAGTCCACGGCCCTGCAACGGTGGAAGCTATCAATAGGAAC
GTTGTTGATGCTTTTCGTTTTCTGCTGCAAAATTTGAGATACCCTCACTA
CAATAGTTCCAAGTAAGTTTCCCCCCAAAAATGGTTACAGTTGTAATTGT
CTTTCGAGGCATGCTGCCGGAGAGGTAGCACCTATATTGACCTGATTATA
GTACAGGAGCTGTTCTGACTTGATCACAGCATATGAGCTCTTCTGACTTG
ATTACAGTATAGAGCTATTCTGACTTGGTCATAGTATAGGATCTCTTCTG
ACTTGATTATCTCGATTCTGGTATAGGAGCTCTTCTGACTTGATCATCTC
GATTCTGGTATAGGAGCTCCTCTGACTTGATTATCTCGATTCTGGTATAG
GAGCTCTTCTGACTTGATTCTAGTACAAGAGCTCTTCTGACTTGATTATC
TCGATTCTGGTGTAGGAGATCTATACCTCGCCGGAAAACTAATCTTACTA
AAAGCTAAAAGCGCAAACGAACTATTCCGAAGCCTATTAATAATAGCCGT
GTCACAAATAATACTTTTAACATTCGTGTTGGTATTCGAACGATATTGGG
GTAAGGCGCCCGGTCAGTCCGAAATATTTTGTCTTTAAAAATGCTACCCC
TATTCTTACAACGTGGTTGCAGAGAGCGGTACCTATTTTTTTTTTGGGGG
GGGGGGGGGGGGGGAAAACATCCCTCCCCCCCCCCCACGTAAAAACGGTT
GCAGTTGTAAAAGGCGTTAATCAAAACTGGTTGAACACTACGTGGTACTT
TACTGTAGAATTAATTGCAACTATTATTTCTTGGGAACTACCATGGTATG
GTTTTCCCCCTATCGAATGGTTGCAGTGAAAAATCATTCAGAACCGCAAC
CCTGTTGTTGGGAAAAACTACTGTTTTAATACATGTTTGCGAATACCATA
CTGGTAGATAAAAGCAGCGCACGACAGCGCACTTGATACGTCCAGAATTG
AGGGATAATGTCTCGGGTTTTTTGCTCGAAAGGTATGCTGCTGCTGCTGC
TGCTGCTGCTGCCGACCACTGCACCCTTTCCCCTCCCCTCGCCCGTCTCC
CACCCAATCTCCGCCACACCGTTTCCATTTGTCTGGGCTTTTGCACGAAA
ATTCTGCTGCTGCTGCTACTACTGCTGCCGACCCTTACACCCCCCCCCCC
TTCCCTCCCCTCGCCGGCCTCCCACCCGATCTCCGGCGCACCGCTCCGTT
CCCACAACAGTTCGATGTACGGTTTCGCCGTGCTGTATTTCACTGGGTCG
GGACAATTCAACCGCAGCATGCGCAACTTCGCCAAGATGAAGGGGCTGAG
CCTCAGCGATAAAGGCCTCCAGCGCGTGAACAGGGTGGGAGGAAAAAAAG
TCCACAGCTTCCCCAGCTTCCGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10513:723..6598+

>mRNA_M-pyrifera_M_contig10513.1107.1 ID=mRNA_M-pyrifera_M_contig10513.1107.1|Name=mRNA_M-pyrifera_M_contig10513.1107.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig10513:723..6598+ (Macrocystis pyrifera P11B4 male)
ATGCCTCGGTCGGAGGCGGCTGAGATCGAGGCAGTGGTAGCTTCGGCCGC
CGAGAGCCTTTGCCCGGGGATGCCTCGGTCGGAGGCGGCTGAGATCGAGG
CAGTGGTAGCTTCGGCCGCCGAGAGCCTTTGCCCGGGGCTACGCCCTAAC
CCTGTCTTCTCTCCGTGCGCGCAGGCGTGTGGGAGCTATAGGCGTGGGAA
GGAGACGTGCGGTGATGTGGACGTTCTCATCTGTCCACCTGAAGGCCAGG
AGCTACGCCCTAACCCTGTCTTCTCTCCGTGCGCGCAGGCGTGTGGGAGC
TATAGGCGTGGGAAGGAGACGTGCGGTGATGTGGACGTTCTCATCTGTCC
ACCTGAAGGCCAGGAGGACTGCTCCATAATGCTCGAGCTCCTGGCAAAGC
TGAGGCGATCGGGGCTGATCACGGATGACTTGGCCACACCCAAGCCGCAT
GAGCCGGGGCACTCTCAGAGCTACATGGGCGTCATAAAGCTTCCAGGGGA
AGGCCGACGACATCGCAGGGTTGACATCAAGCTATATCCCACGACTGCTC
CATAATGCTCGAGCTCCTGGCAAAGCTGAGGCGATCGGGGCTGATCACGG
ATGACTTGGCCACACCCAAGCCGCATGAGCCGGGGCACTCTCAGAGCTAC
ATGGGCGTCATAAAGCTTCCAGGGGAAGGCCGACGACATCGCAGGGTTGA
CATCAAGCTATATCCCACTTCGATGTACGGTTTCGCCGTGCTGTATTTCA
CTGGGTCGGGACAATTCAACCGCAGCATGCGCAACTTCGCCAAGATGAAG
GGGCTGAGCCTCAGCGATAAAGGCCTCCAGCGCGTGAACAGGGTGGGAGG
AAAAAAAGTCCACAGCTTCCCCAGCTTCCGGTGATTCGATGTACGGTTTC
GCCGTGCTGTATTTCACTGGGTCGGGACAATTCAACCGCAGCATGCGCAA
CTTCGCCAAGATGAAGGGGCTGAGCCTCAGCGATAAAGGCCTCCAGCGCG
TGAACAGGGTGGGAGGAAAAAAAGTCCACAGCTTCCCCAGCTTCCGGTGA
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