prot_M-pyrifera_M_contig10513.1107.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10513.1107.1
Unique Nameprot_M-pyrifera_M_contig10513.1107.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length175
Homology
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.590e-68
Identity = 113/174 (64.94%), Postives = 130/174 (74.71%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPK-PHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGGKKVHSFPSF 173
            MPRSEAAEIEAVV   A+S+CPG+          QACGSYRRGK  CGDVDVLI PPEGQED  +  +L+ +L  +G ITD L     PH PG SQS+MG+ KLPG GR HRRVDIK YPTS++ FAVLYFTGS  FNRSMR+FAK+KGL LSDKGL RVN V G++VH FPS+
Sbjct:  184 MPRSEAAEIEAVVTKVAQSICPGV--------ICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGTGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSY 349          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.560e-64
Identity = 112/174 (64.37%), Postives = 130/174 (74.71%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATP-KPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGGKKVHSFPSF 173
            MPRSEAAEIEAVV   A+S+CPG            ACGSYRRGK  CGDVDVLI PPEGQED  +  +L+ +L  +G ITD L     PH+PG SQS+MG+ KLPG+GR HRRVDIK YPTS++ FAVLYFTGS  FNRSMR+FAK+KGL LSDKGL RVN V G++VH FPS+
Sbjct:  660 MPRSEAAEIEAVVTRVAQSICPG------------ACGSYRRGKSHCGDVDVLIRPPEGQEDSPVFDDLIKRLVETGFITDKLTLAGSPHKPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSY 821          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 1.200e-59
Identity = 105/168 (62.50%), Postives = 126/168 (75.00%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPK-PHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGGKKV 167
            MPRSEAAEIEA V   A+S+CPG+          QACGSYRRGK  CGDVDVLI PPEGQED  + LEL+ +L  +G ITD LA P+ P+ PG  Q++MGV KLPGEG+ HRR+D+KLYPTSM+ FAVLYFTGSG FN +MR FAK KGL L+DKGL +V+   G++V
Sbjct:  443 MPRSEAAEIEAAVTKVAQSICPGV--------ICQACGSYRRGKSNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGEGQIHRRLDVKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKSKGLKLNDKGLFKVDPFSGEEV 602          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.110e-57
Identity = 106/172 (61.63%), Postives = 126/172 (73.26%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVF--SPC--AQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPK-PHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGGKKV 167
            MPRSEAAEIEA V   A+S+CPG+     F  SP    +ACGSYRR K  CGDVDVLI PPEGQED S+ LEL+ +L  + LITD LA P+ P+ PG  Q++MGV KLPGEGR HRR+DIKLYP SM+ FAVLYF GSG FN +MR F K KGL L+DKGL +V+   G++V
Sbjct:  403 MPRSEAAEIEAAVTKVAQSICPGVICQASFLTSPRRRTEACGSYRRVKRNCGDVDVLIRPPEGQEDSSMFLELVKELTETRLITDRLAVPEGPYTPGKPQTFMGVCKLPGEGRLHRRLDIKLYPASMFAFAVLYFAGSGDFNMNMRCFGKSKGLKLNDKGLFKVDPFSGEEV 574          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: W4GGX8_9STRA (DNA polymerase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGX8_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.830e-47
Identity = 97/173 (56.07%), Postives = 115/173 (66.47%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQRVNRVGG-KKVHSFPS 172
            +PRSE  EIE+VV     SL P           A  CGSYRRGK   GDVDVLI  P  Q+DC+IM  LLA L   G +TDDL T + H+ G S SYMGV +L GEGRR+RR+DIK+YP +++GFA LYFTGS  FNRSMR FAKMKG SL+DKGL +  R  G KK+   P+
Sbjct:  455 IPRSEVQEIESVVKQHVHSLLPRA--------VAITCGSYRRGKSQSGDVDVLISDPT-QDDCNIMPRLLADLHAIGFLTDDLTTVEEHKIGGSDSYMGVCRL-GEGRRYRRIDIKVYPRNLFGFAQLYFTGSDHFNRSMRAFAKMKGYSLTDKGLYKATRSKGVKKLKQGPN 617          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: UPI0008FEC294 (DNA polymerase lambda isoform X2 n=2 Tax=Bathyergidae TaxID=10167 RepID=UPI0008FEC294)

HSP 1 Score: 159 bits (402), Expect = 4.520e-45
Identity = 90/169 (53.25%), Postives = 108/169 (63.91%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR--VNRVGGKKV 167
            MPR EAAEIE  V  AA++L PGL           ACGS+RRGK TCGDVDVL+  P+G+    I   LL KLR+ G +TDDL + + H  G  Q Y+GV +LPG GRRHRR+DI L P S +  A+LYFTGS  FNRSMR  AK KG+SLS+  L+   V    G KV
Sbjct:  112 MPREEAAEIEQTVRVAAQALSPGLL--------CVACGSFRRGKLTCGDVDVLLTHPDGRSHRGIFSRLLDKLRQQGFLTDDLVSQEDH--GQQQKYLGVCQLPGPGRRHRRLDIILVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALRTAVVRGTQGAKV 270          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: UPI001CA968BB (DNA polymerase lambda isoform X2 n=2 Tax=Chelonioidea TaxID=27791 RepID=UPI001CA968BB)

HSP 1 Score: 159 bits (403), Expect = 3.300e-44
Identity = 89/169 (52.66%), Postives = 107/169 (63.31%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR--VNRVGGKKV 167
            MPR EA EIE  V  AA SL PGL           ACGSYRRGK TCGDVDVL+  P+GQ    I  +LL  LRRSG +TDDL   +  + G+ + Y+GV +LPG GRRHRR+DI + P   +  A+LYFTGS  FNRSMR  AK KG+SLS+  L    V   GG+K+
Sbjct:  212 MPREEAKEIEQTVREAARSLNPGL--------VCMACGSYRRGKATCGDVDVLVTHPDGQSHRGIFGKLLDSLRRSGFLTDDLV--RQEDSGNQKKYLGVCRLPGPGRRHRRLDIIVVPHCEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALHTAVVRAPGGRKM 370          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: UPI00145842E0 (DNA polymerase lambda-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145842E0)

HSP 1 Score: 162 bits (409), Expect = 3.640e-44
Identity = 91/168 (54.17%), Postives = 112/168 (66.67%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR-VNRVGGKKV 167
            MP  EA EIEAVV +AAESL PG+         AQACGSYRR K TCGDVDVL+  P+G+    I  +LL KLR  G +TDDL T +  + G+ + Y+GV KLPGE RRHRR+DI + P   Y  A++YFTGS  FNRS+R+ AK KG+SLS+  L   V R G +KV
Sbjct:  330 MPWVEAGEIEAVVRTAAESLLPGV--------IAQACGSYRRKKTTCGDVDVLVTHPDGKSHRGIFGKLLTKLRDQGFLTDDLVTSE--DDGNQKKYLGVCKLPGENRRHRRLDIIVVPYDEYACALVYFTGSAHFNRSLRHLAKKKGMSLSEHSLNAGVVRNGSEKV 487          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: A0A8C0G3I4_CHEAB (DNA polymerase n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0G3I4_CHEAB)

HSP 1 Score: 156 bits (395), Expect = 4.010e-44
Identity = 89/169 (52.66%), Postives = 109/169 (64.50%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR--VNRVGGKKV 167
            MPR EAAEIE  V+ AA SL PGL           ACGSYRRGK TCGDVDVL+  P+GQ    I  +LL  LRRSG +TDDL   +  + G+ + Y+GV +LPG GRRHRR+DI + P + +  A+LYFTGS  FN SMR  AK +G+SLS+  L    V   GG+KV
Sbjct:  103 MPREEAAEIEQTVSKAAWSLNPGL--------VCVACGSYRRGKATCGDVDVLVTHPDGQSHRGIFGKLLDSLRRSGFLTDDLVIQE--DSGNQKKYLGVCRLPGPGRRHRRLDIIVAPHAEFACALLYFTGSAYFNCSMRALAKTRGMSLSEHALHTAVVRAPGGRKV 261          
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Match: A0A2K6FMH0_PROCO (DNA polymerase n=2 Tax=Lemuriformes TaxID=376915 RepID=A0A2K6FMH0_PROCO)

HSP 1 Score: 154 bits (390), Expect = 7.160e-44
Identity = 89/169 (52.66%), Postives = 104/169 (61.54%), Query Frame = 0
Query:    1 MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDVDVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGVIKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLSLSDKGLQR--VNRVGGKKV 167
            MPR EAAEIE  V  AA +  PGL           ACGSYRRGK TCGDVDVLI  P+G+    I   LL  LR+ G +TDDL + +  E G  Q Y+GV +LPG GRRHRR+DI + P S +  A+LYFTGS  FNRSMR  AK KG+SLS+  L    V    G KV
Sbjct:   60 MPREEAAEIEQTVREAARAFNPGLL--------CVACGSYRRGKMTCGDVDVLITHPDGRSHQGIFSRLLDSLRQQGFLTDDLVSHE--ENGQQQKYLGVCQLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTGVVRNTQGVKV 218          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10513.1107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2F8_ECTSI1.590e-6864.94DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JHQ3_9PHAE1.560e-6464.37DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G2F7_ECTSI1.200e-5962.50DNA polymerase lambda n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JQ91_9PHAE6.110e-5761.63DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
W4GGX8_9STRA6.830e-4756.07DNA polymerase n=2 Tax=Aphanomyces astaci TaxID=11... [more]
UPI0008FEC2944.520e-4553.25DNA polymerase lambda isoform X2 n=2 Tax=Bathyergi... [more]
UPI001CA968BB3.300e-4452.66DNA polymerase lambda isoform X2 n=2 Tax=Chelonioi... [more]
UPI00145842E03.640e-4454.17DNA polymerase lambda-like n=1 Tax=Pecten maximus ... [more]
A0A8C0G3I4_CHEAB4.010e-4452.66DNA polymerase n=1 Tax=Chelonoidis abingdonii TaxI... [more]
A0A2K6FMH0_PROCO7.160e-4452.66DNA polymerase n=2 Tax=Lemuriformes TaxID=376915 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002008DNA polymerase family X, beta-likePRINTSPR00870DNAPOLXBETAcoord: 126..133
score: 75.0
coord: 36..55
score: 54.0
coord: 111..119
score: 60.0
IPR022312DNA polymerase family XPRINTSPR00869DNAPOLXcoord: 49..57
score: 57.26
coord: 112..121
score: 41.54
coord: 35..49
score: 47.18
coord: 128..141
score: 52.75
IPR029398DNA polymerase beta, thumb domainPFAMPF14791DNA_pol_B_thumbcoord: 126..161
e-value: 6.2E-11
score: 42.3
NoneNo IPR availableGENE3D3.30.460.10coord: 1..128
e-value: 7.8E-37
score: 128.0
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 1..163
NoneNo IPR availablePANTHERPTHR11276:SF28DNA POLYMERASE LAMBDAcoord: 1..163
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 1..162
IPR028207DNA polymerase beta, palm domainPFAMPF14792DNA_pol_B_palmcoord: 1..119
e-value: 4.8E-28
score: 97.7
IPR037160DNA polymerase, thumb domain superfamilyGENE3D3.30.210.10coord: 129..171
e-value: 4.5E-12
score: 47.8
IPR019843DNA polymerase family X, binding sitePROSITEPS00522DNA_POLYMERASE_Xcoord: 38..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10513contigM-pyrifera_M_contig10513:750..6598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10513.1107.1mRNA_M-pyrifera_M_contig10513.1107.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10513 723..6598 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10513.1107.1 ID=prot_M-pyrifera_M_contig10513.1107.1|Name=mRNA_M-pyrifera_M_contig10513.1107.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
MPRSEAAEIEAVVASAAESLCPGLRPNPVFSPCAQACGSYRRGKETCGDV
DVLICPPEGQEDCSIMLELLAKLRRSGLITDDLATPKPHEPGHSQSYMGV
IKLPGEGRRHRRVDIKLYPTSMYGFAVLYFTGSGQFNRSMRNFAKMKGLS
LSDKGLQRVNRVGGKKVHSFPSFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002008DNA_pol_X_beta-like
IPR022312DNA_pol_X
IPR029398PolB_thumb
IPR028207DNA_pol_B_palm_palm
IPR037160DNA_Pol_thumb_sf
IPR019843DNA_pol-X_BS