mRNA_M-pyrifera_M_contig104580.988.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A2P6N669_9EUKA (Uncharacterized protein n=2 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N669_9EUKA) HSP 1 Score: 95.9 bits (237), Expect = 7.800e-20 Identity = 67/178 (37.64%), Postives = 101/178 (56.74%), Query Frame = 1 Query: 10 LFGLAGGCLAPLFVFLHLLVVRSRRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMSLSALSALRQL-----FSSAPLPTS-WQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGST---EVQDQLPGIAAVIGAAALVAGVTQTFST 516 L G GCL FV L+ L R+ RR + F+S + + T+T ++ +P+L+G +M+LS +AL L +S L + W +++ +L FA+S F L SI +PIP GL VP L++GA++GR+FGE LLL + E +PG+ A+ GAAA+ A +T T ST Sbjct: 425 LLGFTCGCLGVTFVKLNALGFRTWRRIMQNSKWFRSPYLLAFVFGTITCIITYPKLLGSFMALSPAAALSDLANAETWSETSLKSKEWLNRNIFANLFFFALSRFILIPLSILIPIPCGLFVPSLSLGASVGRMFGEISALLLDNTALLFENNPIIPGVYAICGAAAMTASITHTLST 602
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A0D2UKQ8_CAPO3 (Chloride channel protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UKQ8_CAPO3) HSP 1 Score: 95.9 bits (237), Expect = 7.860e-20 Identity = 67/174 (38.51%), Postives = 99/174 (56.90%), Query Frame = 1 Query: 16 GLAGGCLAPLFVFLHLLVVRSRRRFAKKLW--LFKSVWPYSLAVATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTS--WQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLL--GGSTEVQDQL-PGIAAVIGAAALVAGVTQTFST 516 G+ G LA FV+ H ++ RRR + W L ++ + Y V L FP+ +G +M L+ A+ +LFSS L TS W + +++ +L +F F +TA ++ +P+P+G+ VPI VGAA GR GE + ++ G S V + PG AV+GAAAL AGVT T ST Sbjct: 370 GVIAGFLAAFFVWTHRQLIEVRRRVITR-WPRLGENRYIYPTIVIFLIATFNFPKFMGHFMGLTQKEAINELFSSTKLSTSGDWDSPNIFFTLLLFMCFKFIMTALAVALPVPAGVFVPIFVVGAAYGRFMGELMAVMFPHGISDSVSAAIIPGGYAVVGAAALAAGVTHTIST 542
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A5D6XK32_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XK32_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 5.890e-16 Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 127 YSLAVATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTS----------WQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGSTEVQDQLPGIAAVIGAAALVAGVTQTFS 513 Y+ VA + ++ FP VG +M LS + +FS+ L S W + SL ++L ++ V F+ TA S + +PSG+V P+ AVGAALGRLFGE + LL GG D+L G AV+GAA+L AGVT T S Sbjct: 354 YAAFVALVFALVEFP--VGSFMQLSQRQMIDDMFSAGNLTGSTHLAEDFGQLWTSPSLALNLVVYVVVRFFSTAISATVLVPSGIVTPVFAVGAALGRLFGEMIVLLGGG-----DELAGGYAVVGAASLTAGVTGTIS 485
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A6A5BPG8_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BPG8_NAEFO) HSP 1 Score: 82.4 bits (202), Expect = 3.970e-15 Identity = 57/157 (36.31%), Postives = 84/157 (53.50%), Query Frame = 1 Query: 109 FKSVWPYSLAVATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTSWQAISLWI----------------SLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLL-----GGSTEVQDQLPGIAAVIGAAALVAGVTQTFST 516 F++++ +SL V LTGV+ FP L G++MSL+ L LF PL AI WI +L +F + L+ S+ +PIP+G+ VP++ +GA GRL+GE + L G ST + +PG A++GA A+ A TQ FST Sbjct: 683 FQNIFLWSLLVVILTGVVTFPNLFGKFMSLTPNKTLEMLFYGKPLNPENGAIGDWIKEGKLNSPSAYDDLFKNLGIFMIFRVILSFISVSLPIPAGIYVPLVVMGAGFGRLWGEFIHYLFQNGYYGNSTPLTI-VPGGYAIVGAVAMSASATQAFST 838
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A6F9D9B0_9ASCI (Chloride channel protein n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D9B0_9ASCI) HSP 1 Score: 81.6 bits (200), Expect = 6.990e-15 Identity = 63/190 (33.16%), Postives = 103/190 (54.21%), Query Frame = 1 Query: 16 GLAGGCLAPLFVFLHLLVVR-SRRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMS--LSALSALRQLFSS--------------APLPTSWQ--AISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLG----GSTEVQDQLPGIAAVIGAAALVAGVTQTFST 516 G+ G + LFV++H +V SR+ KL+L K+ + + L V+ + L +PR G++M+ L+ AL LF + + + W+ +++++++L +F V HF +TA +I + IP+G+ +P+ +GAA GRL GE V L V +PG AV+GAA+L GVT T ST Sbjct: 319 GIVCGFASALFVYIHRGIVNFSRKHIRVKLFLQKNRFIFPLLVSLVISSLTYPRGFGQFMAGELTLTEALDTLFDNKTWAKLGYIDESVLSDVQQGWKHPSVNIFVTLVLFIVVHFCMTAVAITLAIPAGVFMPVFLIGAAFGRLVGESVAALYPDGFYSGNNVFRIVPGGYAVVGAASLAGGVTHTIST 508
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A3B5QJ02_XIPMA (Chloride channel protein 2 n=6 Tax=Poeciliinae TaxID=586240 RepID=A0A3B5QJ02_XIPMA) HSP 1 Score: 80.9 bits (198), Expect = 1.310e-14 Identity = 64/190 (33.68%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 16 GLAGGCLAPLFVFLHLLVVRS-RRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMS--LSALSALRQLFSSAP--------------LPTSW--QAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGSTEVQDQL----PGIAAVIGAAALVAGVTQTFST 516 G+A G + LFV+L+ L+V+S +++ +L K+ Y V L L FP G++M+ LS +LR LF + +W +S++++L +F + F++TA +I MP+P G VPI+ +GAA GRL GE + L + + PG AV GAAAL VT T ST Sbjct: 322 GIASGLIGALFVYLNRLIVQSIKKQNTINKFLMKNRLLYPALVTLLVSTLTFPPGFGQFMAGKLSQEESLRTLFDNRTWTKQGIAEEFDYIGTAQAWIHPQVSVFVTLVLFVIMKFWMTALAITMPVPCGAFVPIIVIGAAFGRLVGECMAALFPDGIHSDESIYLIMPGAYAVAGAAALSGAVTHTVST 511
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A662Y099_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y099_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.270e-14 Identity = 68/192 (35.42%), Postives = 103/192 (53.65%), Query Frame = 1 Query: 1 MSVLFGLAGGCLAPLFVFLHLLVVRSRRRFAKKL---WL--FKSVWPYSLA--VATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLP--------------TSWQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGSTEVQDQLPGIAAVIGAAALVAGVTQTFS 513 + +L +A G LA LFV + ++ + RF + W F ++ P++ A VA ++ FP VG +M L+ A+ LFSS L +SW + SL ++L + F+ TA S + +PSG+V P+ A+GAA GRLFGE + ++LGG E+ L G A++GAA+ AGVT T S Sbjct: 376 LFLLLAVACGLLAALFVRTYRALLDVKARFEARYLRPWCGRFPALMPFAYATLVALALSLVEFP--VGSFMQLTQHQAIDDLFSSGNLTAEAGSSTHLADDFGSSWTSPSLALNLMTYTGVRFWSTALSATVLVPSGIVTPVFAIGAAFGRLFGE-LLVVLGGGEEI---LAGGYAIVGAASFTAGVTGTIS 561
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: UPI001454F829 (chloride channel protein 2-like isoform X1 n=4 Tax=Asteroidea TaxID=7588 RepID=UPI001454F829) HSP 1 Score: 79.7 bits (195), Expect = 3.310e-14 Identity = 63/189 (33.33%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 16 GLAGGCLAPLFVFLHLLVV---RSRRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMS--LSALSALRQLFSSAPLPTS------------WQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGE--EVFLLLGGSTE---VQDQLPGIAAVIGAAALVAGVTQTFST 516 G+A G LFVFLH +V R+ +R + +L K+ + Y L VA + + FP +G++M+ L+ + +LFS+ L T W +++++L +F V F++TA ++ +P+P+G+ +P+ +GAA GRL GE + G T + +PG AV+GAAAL VT T ST Sbjct: 317 GIACGFGGALFVFLHRRIVDFNRTHKRIST--FLVKNRFLYPLLVAFVISSITFPLGLGQFMAGELTQKQQIDELFSNTTLGTDPANVNEENKYKPWHRPNVFVTLGVFIVMQFWMTALAVTLPVPAGVFIPVFTLGAAFGRLVGECMAAWFPQGIHTSEGIINKVIPGGYAVVGAAALSGSVTHTIST 503
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A6A5BZM5_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BZM5_NAEFO) HSP 1 Score: 79.0 bits (193), Expect = 6.130e-14 Identity = 56/183 (30.60%), Postives = 93/183 (50.82%), Query Frame = 1 Query: 46 FVFLHLLVVRSRRRFAKKLWLFKS----------------VWPYSLAVATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTSWQAISLWI---------SLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLL-GGSTEVQDQLPGIAAVIGAAALVAGVTQTFST 516 F +L+ +++ R +F K+ +FKS W ++ + +T +L FP+++G++MSLS + + +L SS PL + WI +L +F + F ++ FS+ +PIP G+ +P++ +GA GRLFGE V ++ G Q G A +G A A TQ FST Sbjct: 435 FTYLNEKILQLRDKFGKRYLVFKSDRLAKYKIMLMFENKIFW--TIFICIVTSILTFPQMIGKFMSLSPGAVVEELLSSKPLTSENGITGEWIKNSPTDVFANLAIFCLIRFVISIFSVNLPIPGGVYIPLVIIGAGCGRLFGEIVAVIFPDGFVPGQPIYAGAFAAVGIVACTASSTQAFST 615
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A4X3PCP1_PRIPA (Chloride channel protein n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A4X3PCP1_PRIPA) HSP 1 Score: 79.0 bits (193), Expect = 6.360e-14 Identity = 63/194 (32.47%), Postives = 106/194 (54.64%), Query Frame = 1 Query: 1 MSVLFGLAGGCLAPLFVFLH---LLVVRSRRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMS--LSALSALRQLFSSAPLPTSWQA-------------ISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGS--TEVQDQL--PGIAAVIGAAALVAGVTQTFST 516 + VL G+ G ++ LF+ H +L +R R RF KK++ + + Y L ++TL G + +P +G++M+ ++ L F++ A +S+++SL +F + HF+L+ MP+PSG+++ L +GAA+GRL GE ++ G T V Q+ PG+ AV G+AA+V VT T ST Sbjct: 286 LFVLLGVIIGVISVLFIKFHRFWVLFLR-RNRFCKKIFQ-SNFFVYPLVISTLVGTITYPESLGQFMAGKKKFMTTLIDFFATCTWSNIEGATSITDNYTGLHHDVSIFVSLSVFIIVHFFLSILCHTMPVPSGIIISSLGMGAAMGRLMGEIFSVMNDGFVWTGVVHQMIYPGVYAVAGSAAMVGSVTHTVST 477 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104580.988.1 >prot_M-pyrifera_M_contig104580.988.1 ID=prot_M-pyrifera_M_contig104580.988.1|Name=mRNA_M-pyrifera_M_contig104580.988.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp MSVLFGLAGGCLAPLFVFLHLLVVRSRRRFAKKLWLFKSVWPYSLAVATLback to top mRNA from alignment at M-pyrifera_M_contig104580:1..516- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104580.988.1 ID=mRNA_M-pyrifera_M_contig104580.988.1|Name=mRNA_M-pyrifera_M_contig104580.988.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig104580:1..516- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104580:1..516- >mRNA_M-pyrifera_M_contig104580.988.1 ID=mRNA_M-pyrifera_M_contig104580.988.1|Name=mRNA_M-pyrifera_M_contig104580.988.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig104580:1..516- (Macrocystis pyrifera P11B4 male)back to top |