prot_M-pyrifera_M_contig104580.988.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig104580.988.1
Unique Name	prot_M-pyrifera_M_contig104580.988.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	172

Homology

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A2P6N669_9EUKA (Uncharacterized protein n=2 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N669_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 7.800e-20
Identity = 67/178 (37.64%), Postives = 101/178 (56.74%), Query Frame = 0

Query:    4 LFGLAGGCLAPLFVFLHLLVVRSRRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMSLSALSALRQL-----FSSAPLPTS-WQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGST---EVQDQLPGIAAVIGAAALVAGVTQTFST 172
            L G   GCL   FV L+ L  R+ RR  +    F+S +  +    T+T ++ +P+L+G +M+LS  +AL  L     +S   L +  W   +++ +L  FA+S F L   SI +PIP GL VP L++GA++GR+FGE   LLL  +    E    +PG+ A+ GAAA+ A +T T ST
Sbjct:  425 LLGFTCGCLGVTFVKLNALGFRTWRRIMQNSKWFRSPYLLAFVFGTITCIITYPKLLGSFMALSPAAALSDLANAETWSETSLKSKEWLNRNIFANLFFFALSRFILIPLSILIPIPCGLFVPSLSLGASVGRMFGEISALLLDNTALLFENNPIIPGVYAICGAAAMTASITHTLST 602

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A0D2UKQ8_CAPO3 (Chloride channel protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UKQ8_CAPO3)

HSP 1 Score: 95.9 bits (237), Expect = 7.860e-20
Identity = 67/174 (38.51%), Postives = 99/174 (56.90%), Query Frame = 0

Query:    6 GLAGGCLAPLFVFLHLLVVRSRRRFAKKLW--LFKSVWPYSLAVATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTS--WQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLL--GGSTEVQDQL-PGIAAVIGAAALVAGVTQTFST 172
            G+  G LA  FV+ H  ++  RRR   + W  L ++ + Y   V  L     FP+ +G +M L+   A+ +LFSS  L TS  W + +++ +L +F    F +TA ++ +P+P+G+ VPI  VGAA GR  GE + ++   G S  V   + PG  AV+GAAAL AGVT T ST
Sbjct:  370 GVIAGFLAAFFVWTHRQLIEVRRRVITR-WPRLGENRYIYPTIVIFLIATFNFPKFMGHFMGLTQKEAINELFSSTKLSTSGDWDSPNIFFTLLLFMCFKFIMTALAVALPVPAGVFVPIFVVGAAYGRFMGELMAVMFPHGISDSVSAAIIPGGYAVVGAAALAAGVTHTIST 542

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A5D6XK32_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XK32_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 5.890e-16
Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 0

Query:   43 YSLAVATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTS----------WQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGSTEVQDQLPGIAAVIGAAALVAGVTQTFS 171
            Y+  VA +  ++ FP  VG +M LS    +  +FS+  L  S          W + SL ++L ++ V  F+ TA S  + +PSG+V P+ AVGAALGRLFGE + LL GG     D+L G  AV+GAA+L AGVT T S
Sbjct:  354 YAAFVALVFALVEFP--VGSFMQLSQRQMIDDMFSAGNLTGSTHLAEDFGQLWTSPSLALNLVVYVVVRFFSTAISATVLVPSGIVTPVFAVGAALGRLFGEMIVLLGGG-----DELAGGYAVVGAASLTAGVTGTIS 485

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A6A5BPG8_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BPG8_NAEFO)

HSP 1 Score: 82.4 bits (202), Expect = 3.970e-15
Identity = 57/157 (36.31%), Postives = 84/157 (53.50%), Query Frame = 0

Query:   37 FKSVWPYSLAVATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTSWQAISLWI----------------SLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLL-----GGSTEVQDQLPGIAAVIGAAALVAGVTQTFST 172
            F++++ +SL V  LTGV+ FP L G++MSL+    L  LF   PL     AI  WI                +L +F +    L+  S+ +PIP+G+ VP++ +GA  GRL+GE +  L      G ST +   +PG  A++GA A+ A  TQ FST
Sbjct:  683 FQNIFLWSLLVVILTGVVTFPNLFGKFMSLTPNKTLEMLFYGKPLNPENGAIGDWIKEGKLNSPSAYDDLFKNLGIFMIFRVILSFISVSLPIPAGIYVPLVVMGAGFGRLWGEFIHYLFQNGYYGNSTPLTI-VPGGYAIVGAVAMSASATQAFST 838

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A6F9D9B0_9ASCI (Chloride channel protein n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D9B0_9ASCI)

HSP 1 Score: 81.6 bits (200), Expect = 6.990e-15
Identity = 63/190 (33.16%), Postives = 103/190 (54.21%), Query Frame = 0

Query:    6 GLAGGCLAPLFVFLHLLVVR-SRRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMS--LSALSALRQLFSS--------------APLPTSWQ--AISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLG----GSTEVQDQLPGIAAVIGAAALVAGVTQTFST 172
            G+  G  + LFV++H  +V  SR+    KL+L K+ + + L V+ +   L +PR  G++M+  L+   AL  LF +              + +   W+  +++++++L +F V HF +TA +I + IP+G+ +P+  +GAA GRL GE V  L          V   +PG  AV+GAA+L  GVT T ST
Sbjct:  319 GIVCGFASALFVYIHRGIVNFSRKHIRVKLFLQKNRFIFPLLVSLVISSLTYPRGFGQFMAGELTLTEALDTLFDNKTWAKLGYIDESVLSDVQQGWKHPSVNIFVTLVLFIVVHFCMTAVAITLAIPAGVFMPVFLIGAAFGRLVGESVAALYPDGFYSGNNVFRIVPGGYAVVGAASLAGGVTHTIST 508

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A3B5QJ02_XIPMA (Chloride channel protein 2 n=6 Tax=Poeciliinae TaxID=586240 RepID=A0A3B5QJ02_XIPMA)

HSP 1 Score: 80.9 bits (198), Expect = 1.310e-14
Identity = 64/190 (33.68%), Postives = 97/190 (51.05%), Query Frame = 0

Query:    6 GLAGGCLAPLFVFLHLLVVRS-RRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMS--LSALSALRQLFSSAP--------------LPTSW--QAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGSTEVQDQL----PGIAAVIGAAALVAGVTQTFST 172
            G+A G +  LFV+L+ L+V+S +++     +L K+   Y   V  L   L FP   G++M+  LS   +LR LF +                   +W    +S++++L +F +  F++TA +I MP+P G  VPI+ +GAA GRL GE +  L        + +    PG  AV GAAAL   VT T ST
Sbjct:  322 GIASGLIGALFVYLNRLIVQSIKKQNTINKFLMKNRLLYPALVTLLVSTLTFPPGFGQFMAGKLSQEESLRTLFDNRTWTKQGIAEEFDYIGTAQAWIHPQVSVFVTLVLFVIMKFWMTALAITMPVPCGAFVPIIVIGAAFGRLVGECMAALFPDGIHSDESIYLIMPGAYAVAGAAALSGAVTHTVST 511

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A662Y099_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y099_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.270e-14
Identity = 68/192 (35.42%), Postives = 103/192 (53.65%), Query Frame = 0

Query:    1 MSVLFGLAGGCLAPLFVFLHLLVVRSRRRFAKKL---WL--FKSVWPYSLA--VATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLP--------------TSWQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGSTEVQDQLPGIAAVIGAAALVAGVTQTFS 171
            + +L  +A G LA LFV  +  ++  + RF  +    W   F ++ P++ A  VA    ++ FP  VG +M L+   A+  LFSS  L               +SW + SL ++L  +    F+ TA S  + +PSG+V P+ A+GAA GRLFGE + ++LGG  E+   L G  A++GAA+  AGVT T S
Sbjct:  376 LFLLLAVACGLLAALFVRTYRALLDVKARFEARYLRPWCGRFPALMPFAYATLVALALSLVEFP--VGSFMQLTQHQAIDDLFSSGNLTAEAGSSTHLADDFGSSWTSPSLALNLMTYTGVRFWSTALSATVLVPSGIVTPVFAIGAAFGRLFGE-LLVVLGGGEEI---LAGGYAIVGAASFTAGVTGTIS 561

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: UPI001454F829 (chloride channel protein 2-like isoform X1 n=4 Tax=Asteroidea TaxID=7588 RepID=UPI001454F829)

HSP 1 Score: 79.7 bits (195), Expect = 3.310e-14
Identity = 63/189 (33.33%), Postives = 102/189 (53.97%), Query Frame = 0

Query:    6 GLAGGCLAPLFVFLHLLVV---RSRRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMS--LSALSALRQLFSSAPLPTS------------WQAISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGE--EVFLLLGGSTE---VQDQLPGIAAVIGAAALVAGVTQTFST 172
            G+A G    LFVFLH  +V   R+ +R +   +L K+ + Y L VA +   + FP  +G++M+  L+    + +LFS+  L T             W   +++++L +F V  F++TA ++ +P+P+G+ +P+  +GAA GRL GE    +   G  T    +   +PG  AV+GAAAL   VT T ST
Sbjct:  317 GIACGFGGALFVFLHRRIVDFNRTHKRIST--FLVKNRFLYPLLVAFVISSITFPLGLGQFMAGELTQKQQIDELFSNTTLGTDPANVNEENKYKPWHRPNVFVTLGVFIVMQFWMTALAVTLPVPAGVFIPVFTLGAAFGRLVGECMAAWFPQGIHTSEGIINKVIPGGYAVVGAAALSGSVTHTIST 503

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A6A5BZM5_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BZM5_NAEFO)

HSP 1 Score: 79.0 bits (193), Expect = 6.130e-14
Identity = 56/183 (30.60%), Postives = 93/183 (50.82%), Query Frame = 0

Query:   16 FVFLHLLVVRSRRRFAKKLWLFKS----------------VWPYSLAVATLTGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTSWQAISLWI---------SLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLL-GGSTEVQDQLPGIAAVIGAAALVAGVTQTFST 172
            F +L+  +++ R +F K+  +FKS                 W  ++ +  +T +L FP+++G++MSLS  + + +L SS PL +       WI         +L +F +  F ++ FS+ +PIP G+ +P++ +GA  GRLFGE V ++   G    Q    G  A +G  A  A  TQ FST
Sbjct:  435 FTYLNEKILQLRDKFGKRYLVFKSDRLAKYKIMLMFENKIFW--TIFICIVTSILTFPQMIGKFMSLSPGAVVEELLSSKPLTSENGITGEWIKNSPTDVFANLAIFCLIRFVISIFSVNLPIPGGVYIPLVIIGAGCGRLFGEIVAVIFPDGFVPGQPIYAGAFAAVGIVACTASSTQAFST 615

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BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Match: A0A4X3PCP1_PRIPA (Chloride channel protein n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A4X3PCP1_PRIPA)

HSP 1 Score: 79.0 bits (193), Expect = 6.360e-14
Identity = 63/194 (32.47%), Postives = 106/194 (54.64%), Query Frame = 0

Query:    1 MSVLFGLAGGCLAPLFVFLH---LLVVRSRRRFAKKLWLFKSVWPYSLAVATLTGVLLFPRLVGEYMS--LSALSALRQLFSSAPLPTSWQA-------------ISLWISLPMFAVSHFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGS--TEVQDQL--PGIAAVIGAAALVAGVTQTFST 172
            + VL G+  G ++ LF+  H   +L +R R RF KK++   + + Y L ++TL G + +P  +G++M+     ++ L   F++        A             +S+++SL +F + HF+L+     MP+PSG+++  L +GAA+GRL GE   ++  G   T V  Q+  PG+ AV G+AA+V  VT T ST
Sbjct:  286 LFVLLGVIIGVISVLFIKFHRFWVLFLR-RNRFCKKIFQ-SNFFVYPLVISTLVGTITYPESLGQFMAGKKKFMTTLIDFFATCTWSNIEGATSITDNYTGLHHDVSIFVSLSVFIIVHFFLSILCHTMPVPSGIIISSLGMGAAMGRLMGEIFSVMNDGFVWTGVVHQMIYPGVYAVAGSAAMVGSVTHTVST 477

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig104580.988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2P6N669_9EUKA	7.800e-20	37.64	Uncharacterized protein n=2 Tax=Planoprotostelium ...	[more]
A0A0D2UKQ8_CAPO3	7.860e-20	38.51	Chloride channel protein n=1 Tax=Capsaspora owczar...	[more]
A0A5D6XK32_9STRA	5.890e-16	42.45	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A6A5BPG8_NAEFO	3.970e-15	36.31	Uncharacterized protein n=1 Tax=Naegleria fowleri ...	[more]
A0A6F9D9B0_9ASCI	6.990e-15	33.16	Chloride channel protein n=1 Tax=Phallusia mammill...	[more]
A0A3B5QJ02_XIPMA	1.310e-14	33.68	Chloride channel protein 2 n=6 Tax=Poeciliinae Tax...	[more]
A0A662Y099_9STRA	3.270e-14	35.42	Uncharacterized protein n=2 Tax=Nothophytophthora ...	[more]
UPI001454F829	3.310e-14	33.33	chloride channel protein 2-like isoform X1 n=4 Tax...	[more]
A0A6A5BZM5_NAEFO	6.130e-14	30.60	Uncharacterized protein n=1 Tax=Naegleria fowleri ...	[more]
A0A4X3PCP1_PRIPA	6.360e-14	32.47	Chloride channel protein n=2 Tax=Pristionchus paci...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001807	Chloride channel, voltage gated	PRINTS	PR00762	CLCHANNEL	coord: 152..168 score: 50.47 coord: 113..133 score: 53.33
IPR001807	Chloride channel, voltage gated	PFAM	PF00654	Voltage_CLC	coord: 2..170 e-value: 7.1E-22 score: 78.1
IPR014743	Chloride channel, core	GENE3D	1.10.3080.10		coord: 1..172 e-value: 1.5E-26 score: 95.3
IPR014743	Chloride channel, core	SUPERFAMILY	81340	Clc chloride channel	coord: 3..169
None	No IPR available	PANTHER	PTHR45720:SF10	CHLORIDE CHANNEL PROTEIN 2	coord: 3..172
None	No IPR available	PANTHER	PTHR45720	FAMILY NOT NAMED	coord: 3..172
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 85..104
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 172..172
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 105..115
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 24..34
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 134..152
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 153..171
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 116..133
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 57..84
None	No IPR available	TMHMM	TMhelix		coord: 81..100
None	No IPR available	TMHMM	TMhelix		coord: 39..61
None	No IPR available	TMHMM	TMhelix		coord: 107..129
None	No IPR available	TMHMM	TMhelix		coord: 4..26
None	No IPR available	TMHMM	TMhelix		coord: 149..166

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig104580	contig	M-pyrifera_M_contig104580:1..516 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig104580.988.1	mRNA_M-pyrifera_M_contig104580.988.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig104580 1..516 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig104580.988.1 ID=prot_M-pyrifera_M_contig104580.988.1|Name=mRNA_M-pyrifera_M_contig104580.988.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp
MSVLFGLAGGCLAPLFVFLHLLVVRSRRRFAKKLWLFKSVWPYSLAVATL
TGVLLFPRLVGEYMSLSALSALRQLFSSAPLPTSWQAISLWISLPMFAVS
HFYLTAFSICMPIPSGLVVPILAVGAALGRLFGEEVFLLLGGSTEVQDQL
PGIAAVIGAAALVAGVTQTFST

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001807	Cl-channel_volt-gated
IPR014743	Cl-channel_core