mRNA_M-pyrifera_M_contig104561.980.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: UPI000F0B767E (hypothetical protein n=1 Tax=Haliea alexandrii TaxID=2448162 RepID=UPI000F0B767E) HSP 1 Score: 156 bits (394), Expect = 5.300e-48 Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 1 Query: 1 MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWRAR 267 MDAK IVALVV IAVAAHVVLYRWVKFKIQEGVIL FLRDARDEGAPAH+HAA IAAHTQLSAERVAAVCARSKE++ADPQAEHSWRAR Sbjct: 1 MDAKFIVALVVVIAVAAHVVLYRWVKFKIQEGVILQFLRDARDEGAPAHHHAAAIAAHTQLSAERVAAVCARSKEVMADPQAEHSWRAR 89
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: A0A2D4TD64_9GAMM (Uncharacterized protein n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A2D4TD64_9GAMM) HSP 1 Score: 149 bits (375), Expect = 4.190e-45 Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 1 MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWRAR 267 MDAKIIVALVV IAVAAHVVLYRWVKFKIQEGVIL FLRDAR++GAPAH+HA IAAHTQLS ERVA VCARSK+ILADPQAEHSWR R Sbjct: 1 MDAKIIVALVVIIAVAAHVVLYRWVKFKIQEGVILQFLRDAREDGAPAHHHAVAIAAHTQLSPERVATVCARSKDILADPQAEHSWRVR 89
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: UPI000404265B (hypothetical protein n=1 Tax=Haliea salexigens TaxID=287487 RepID=UPI000404265B) HSP 1 Score: 126 bits (316), Expect = 4.420e-36 Identity = 66/87 (75.86%), Postives = 71/87 (81.61%), Query Frame = 1 Query: 1 MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWR 261 MDAKIIVALVV IAVAAHVVLYRWVKFKIQEGVIL FLRDAR+EGAP H+H IAAHT LS RV VC +SK++L DP HSWR Sbjct: 1 MDAKIIVALVVIIAVAAHVVLYRWVKFKIQEGVILQFLRDAREEGAPDHHHVDAIAAHTGLSVARVKTVCEKSKQVLPDPAVAHSWR 87
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: A0A2E7C6W7_9GAMM (Uncharacterized protein n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C6W7_9GAMM) HSP 1 Score: 125 bits (313), Expect = 1.230e-35 Identity = 65/89 (73.03%), Postives = 74/89 (83.15%), Query Frame = 1 Query: 1 MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWRAR 267 M A+ +V +VV +A+ AHV LYRWVKFKIQEGVIL FLRDA +EGAP H+HA IA HTQLSAERVAAVCARSKEI+ADP+ SWRAR Sbjct: 1 MSAQAVVFVVVVVALIAHVALYRWVKFKIQEGVILQFLRDAAEEGAPDHHHATAIAVHTQLSAERVAAVCARSKEIIADPEDGQSWRAR 89
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: A0A3N5QDT3_9DELT (Uncharacterized protein n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A3N5QDT3_9DELT) HSP 1 Score: 110 bits (275), Expect = 8.290e-30 Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 1 MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWRA 264 M+++II+ALVV +AVAAHV +YRWVKFKI EGVIL FLRDA + GAP H+HA IAAHT +S +RV VC +S EI +DP E+SWRA Sbjct: 1 MESQIIIALVVLVAVAAHVAIYRWVKFKIHEGVILQFLRDAGEGGAPDHHHADAIAAHTGVSVKRVILVCRKSVEIHSDPDVENSWRA 88
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: A0A2N5WZ46_9GAMM (Uncharacterized protein n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5WZ46_9GAMM) HSP 1 Score: 102 bits (255), Expect = 7.990e-27 Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 1 Query: 13 IIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWR 261 II+A VV IA+ AHV LYRWVKF+IQEGVIL +LRD D GAP H+H IAAHT+L+ +RVA VC RS++I DP A SWR Sbjct: 4 IIIAAVVVIALLAHVALYRWVKFEIQEGVILQYLRDEADSGAPDHHHTETIAAHTRLAKDRVAKVCQRSRDIRPDPDAVDSWR 86
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: A0A5B0WNA9_9GAMM (Uncharacterized protein n=1 Tax=Pseudohalioglobus sp. NY5 TaxID=2606449 RepID=A0A5B0WNA9_9GAMM) HSP 1 Score: 85.9 bits (211), Expect = 3.870e-20 Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 13 IIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWR 261 +IVA VV +AV AHV LYRWV+FKI EGVI+ FLRDA + GA A A IAAHT+L +RV AVCARS + AD +WR Sbjct: 4 VIVAAVVIVAVLAHVALYRWVRFKIHEGVIIQFLRDAAENGA-AGSSATDIAAHTELPLKRVQAVCARSNAVCADASTPDNWR 85
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: A0A1Y0KQH6_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas sp. M30-35 TaxID=1981174 RepID=A0A1Y0KQH6_9PSED) HSP 1 Score: 82.8 bits (203), Expect = 6.720e-19 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 1 MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWR 261 M KII+A+VV +++AAH LYRWVKFKI EGV+L L DA+ AH + IA HTQ+ +RVA VC +S +I P AE +W+ Sbjct: 1 MSEKIIIAVVVIVSLAAHYWLYRWVKFKIDEGVVLKCLEDAKTTSGDAHLSSQSIAQHTQMKLQRVATVCQQSPKIQHSPGAEDTWQ 87
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: A0A238ZV29_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas segetis TaxID=298908 RepID=A0A238ZV29_9PSED) HSP 1 Score: 77.0 bits (188), Expect = 1.280e-16 Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 1 MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSWR 261 M KII+ALVV +++AAH LYRWVKFKI EGVIL L DA+ + IA TQ+ +R+A VC +S I + P AE +W+ Sbjct: 1 MSEKIIIALVVIVSLAAHYWLYRWVKFKIDEGVILKCLEDAKAASGQGQLDSPSIARQTQMKPQRIAQVCRQSPRIQSSPGAEETWK 87
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Match: A0A1E5X6D0_9PSED (Uncharacterized protein n=4 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A1E5X6D0_9PSED) HSP 1 Score: 71.2 bits (173), Expect = 2.480e-14 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 1 MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*FLRDARDEGAPAHYHAAVIAAHTQLSAERVAAVCARSKEILADPQAEHSW 258 M+AK+I+A+VV +A+ H LY+W+KFKI EGV+L FLRDA + A +A L +RV AVC RS EI+A A +W Sbjct: 1 MEAKVIIAIVVIVALIGHYWLYKWIKFKIDEGVVLKFLRDAAGTNPETLHTAQDMAEALLLPPDRVRAVCTRSPEIIAVQGAPDTW 86 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104561.980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104561.980.1 >prot_M-pyrifera_M_contig104561.980.1 ID=prot_M-pyrifera_M_contig104561.980.1|Name=mRNA_M-pyrifera_M_contig104561.980.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=36bp MDAKIIVALVVFIAVAAHVVLYRWVKFKIQEGVIL*back to top mRNA from alignment at M-pyrifera_M_contig104561:326..592- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104561.980.1 ID=mRNA_M-pyrifera_M_contig104561.980.1|Name=mRNA_M-pyrifera_M_contig104561.980.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=267bp|location=Sequence derived from alignment at M-pyrifera_M_contig104561:326..592- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104561:326..592- >mRNA_M-pyrifera_M_contig104561.980.1 ID=mRNA_M-pyrifera_M_contig104561.980.1|Name=mRNA_M-pyrifera_M_contig104561.980.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=216bp|location=Sequence derived from alignment at M-pyrifera_M_contig104561:326..592- (Macrocystis pyrifera P11B4 male)back to top |