mRNA_M-pyrifera_M_contig104317.916.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: A0A2E6GPB4_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GPB4_9PROT) HSP 1 Score: 102 bits (255), Expect = 1.050e-21 Identity = 76/177 (42.94%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 109 GTTLDGV--TINGDVFSANSISNTXXXXXXXXGTWTLASSGALTDLVFTGAQTIGGNATIVMGDHTNNRIVNNNVVTT--IGANTTIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNALGFANNGILNAQGTGGLHITGATVFANNTAIDIDAGSALLVDGS--SRINGGLINLG 621 G LD V T ++ S NS GT ++ S+G TDL F G QT+ GN IVM D NRI ++ T IGAN IRGAGQ+G N GG N GTI +G L +D ALGF N IL A+GTGG+ GA F NNT I+ A S L + S + + G L +G Sbjct: 443 GALLDNVRLTSGSNLVSGNSHDWRFQNGFVNDGTISMNSAGGSTDLEFIGTQTLSGNGEIVMSDSNQNRIFADDAADTLTIGANQVIRGAGQIGLNLGGTINNGTIRQQGTVNLHLDPGALGFTQNNILRAEGTGGISF-GAGTFTNNTTIEALADSNLTITSSLTTIVGGDLTTIG 618
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: A0A011QPC2_9PROT (Uncharacterized protein n=1 Tax=Candidatus Accumulibacter sp. BA-92 TaxID=1454003 RepID=A0A011QPC2_9PROT) HSP 1 Score: 89.4 bits (220), Expect = 3.550e-17 Identity = 76/192 (39.58%), Postives = 101/192 (52.60%), Query Frame = 1 Query: 1 NTAIDIDAGSALLVDGSSRINGGLINLGAGVEADLRGTTLDGVTIN----GDVF-----SANSISNTXXXXXXXX------GTWT------LASSGALTDLVFTGAQTIGGNATIVMGDHTNNRIVNNN----VVTTIGANTTIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNALGFANNGILNAQGTG 501 NT I AG L + GS IN G + G + G+T+ G T+ G VF + +S+SNT GT+T LAS+ +TDL G T+ G T+ M + NNRI ++ V T ++ TI+GAGQLG N G DNQG ILAEG + L+IDV+A G +N+GIL A GTG Sbjct: 205 NTGILRAAGGQLTIQGSDLINTGGVIDAVGTNVVITGSTVTGGTLQSSSGGKVFVQGSSNLSSVSNTGQVEIATAQTGLLTGTFTNTGNLQLASANHVTDLTLNGDVTLTGAGTLTMSNSANNRIYGHSGSGSEVLTNASDHTIQGAGQLGVNRTGLDNQGLILAEGSAGLLIDVSAAGMSNSGILRA-GTG 395
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: A0A2G6MNU0_9DELT (Uncharacterized protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A2G6MNU0_9DELT) HSP 1 Score: 73.9 bits (180), Expect = 3.040e-12 Identity = 54/134 (40.30%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 238 LVFTGAQTIGGNATIVMGDHTNNRIVNNNVVTTIG--ANTTIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNA-LGFANNGILNAQGTGGL-HITGATVFANNTAID----IDAGSALLVDGSSRINGGLIN 615 ++F G QT+ G I++ D N I + TI A+ TIRGAGQL +N G NQG I+AEG +AL ID +A LGF N G+++AQGTGGL HI A T ++ + + L+ G G++N Sbjct: 1 MLFNGDQTLSGTGQIILSDKVTNLISMASYGQTITQEADHTIRGAGQLLSNRGNMVNQGKIIAEGTAALTIDPHANLGFENQGLVSAQGTGGLTHIGSYLQTAGETVVNSLMTVKSNGDFLLQGGGLSGNGVLN 134
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: UPI00145E6D19 (choice-of-anchor D domain-containing protein n=1 Tax=Candidatus Accumulibacter phosphatis TaxID=327160 RepID=UPI00145E6D19) HSP 1 Score: 73.6 bits (179), Expect = 1.370e-11 Identity = 55/110 (50.00%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 211 LASSGALTDLVFTGAQTIGGNATIVMGDHTNNRIVNNNVVTT-IGANT---TIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNALGFANNGILNAQGTGGLHITGATV 528 LAS G T+L G T+ G T+ M ++ NRIV ++ TT I N TI+GAGQLGAN G DNQG ILA G + LVIDV+ G N+G L A GTG L I +TV Sbjct: 76 LASVGNQTNLRLNGDVTLTGPGTLTMSNNIQNRIVGHSGSTTEILTNALGHTIQGAGQLGANQMGLDNQGLILATGSAGLVIDVSPAGMTNSGTLRA-GTGVLTIQNSTV 184
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: A0A011NZD2_9PROT (PEP-CTERM domain-containing protein n=1 Tax=Candidatus Accumulibacter sp. BA-92 TaxID=1454003 RepID=A0A011NZD2_9PROT) HSP 1 Score: 73.2 bits (178), Expect = 1.800e-11 Identity = 61/141 (43.26%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 211 LASSGALTDLVFTGAQTIGGNATIVMGDHTNNRIVNNN----VVTTIGANTTIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNA---LGFANNGILNAQGTGGLHITGATVFANNTAIDIDA-GSALLVDGSSRINGGL 609 LAS+ +TDL G T+ G T+ M + TNNRI N+ V T + TI+GAGQLG N G DNQG I+A + L ID++ + +N GIL A G G L I G + NT IDA GS +L+ GS+ NG L Sbjct: 124 LASANHVTDLTLNGDVTLTGAGTLSMSNSTNNRIYGNSGSGSEVLTNASGHTIQGAGQLGVNRTGLDNQGLIVANQSNELTIDLSGGAGITRSNTGILRAAG-GQLTIQGTNL--TNTGGVIDAVGSNVLITGSTITNGTL 261
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: A0A7Y3UAN1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y3UAN1_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 1.840e-11 Identity = 67/209 (32.06%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 22 AGSALLVDGSSRINGGLINLGAGVEADLRGT---TLDGVTINGDVFSANSISNTXXXXXXXXGTWTLASSGALTDLVFTG-AQTIGGNATIVMGDHTNNRIVNNNVVTTI--GANTTIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNALGFANNGILNAQGTGGLHITGATVFANNTAIDIDAGSALLVDG-------SSRINGGL 609 AGS + + GS+ I GG++ + G+ +L +T+NG N S GT T+ S+G+ T L T+ G+ +V+ ++RI +N + GA+ TIRG G +GAN+ G N G+I+A+ G L IDVN L F N G+L++ + I+ T + T I +D G+AL +G +R+NG L Sbjct: 790 AGSTVTLSGSADIRGGVLATVDDGTFQVPGSQTPSLTDLTLNGTYTVNNGASTYALGTIVNNGTMTIDSTGSYTYLYANSDIVTLDGSGEVVLPG-VSSRIQSNGTTRDLVNGASHTIRGRGNIGANNMGLTNLGSIVADTGETLTIDVNTLDFDNQGLLHSTAGSTVAISSGTFQTSGTVI-VDEGAALTRNGPYPQSAGETRVNGSL 996
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: UPI00145E7C13 (hypothetical protein n=1 Tax=Candidatus Accumulibacter phosphatis TaxID=327160 RepID=UPI00145E7C13) HSP 1 Score: 69.7 bits (169), Expect = 2.500e-10 Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 211 LASSGALTDLVFTGAQTIGGNATIVMGDHTNNRIVNNNVVTT-IGANT---TIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNALGFANNGILNAQGTGGLHITGATV 528 LAS G T+L G T+ G T+ M ++ N++ ++ TT I N TI+GAGQLGAN G DNQG ILA G + LVIDV+ G N+G L A GTG L I +TV Sbjct: 476 LASVGNQTNLRLNGDVTLTGPGTLTMSNNIQNQVFGHSGSTTEILTNALGHTIQGAGQLGANQMGLDNQGLILATGSAGLVIDVSPAGMTNSGTLRA-GTGVLTIQNSTV 584
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: A0A527E5D5_9HYPH (Adhesin n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A527E5D5_9HYPH) HSP 1 Score: 66.6 bits (161), Expect = 3.070e-9 Identity = 62/185 (33.51%), Postives = 86/185 (46.49%), Query Frame = 1 Query: 70 LINLGAGVEADLRGTTLDGVTINGDVFSANSISNTXXXXXXXXG-----TWTLASSGALTDLVFTGAQTI----------GGNATIVMGDHTNNRIVNNNV-VTTIGANTTIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNALGFANNGILNAQGTGGLHITGATVFANNTAIDIDAGSALL 576 +I LG G L G +T + VF + N G + T+ +SG ++ L TG +T+ G I++ D T N I VT + + TI GAGQLG DNQGTI+A G +ALVID N+GIL A G+GGL ITG AN+ + + G ++ Sbjct: 784 VIALGDGQSITLDGVHSGALTASNFVFDQTPVVNNPGTMTIGDGALLPLSGTINNSGVIS-LDSTGGETLLQIIQHGVTLQGGGQILLSDSTANVISGTGPDVTLVNVDNTISGAGQLGGGMLSLDNQGTIIASGANALVIDTGGSVVTNSGILEATGSGGLTITGG--LANSGMLLANGGDIVI 965
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: A0A850E8A3_9BRAD (Tandem-95 repeat protein n=1 Tax=Tardiphaga robiniae TaxID=943830 RepID=A0A850E8A3_9BRAD) HSP 1 Score: 66.6 bits (161), Expect = 3.430e-9 Identity = 61/172 (35.47%), Postives = 86/172 (50.00%), Query Frame = 1 Query: 139 GDVFSANSISNTXXXXXXXXGTWTLASSGALT--DLVFTGAQTIGGNATIVMGDHTNNRIVNN-NVVTTIGANTTIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNALGFANNGILNAQGTGGLHI-----TGATVFANNTAIDID-----AGSALLVDGSSRINGGLIN 615 GD+ +N G+ LAS+G T ++V G +GG T+ + D ++N I + + VT + TI GAGQLG N+GTI+A+G +ALVID N+G L A GTGGL++ V+AN +D D +GSALL +S GG N Sbjct: 6091 GDIVLSNGALMPFSGVLDNTGSIHLASTGGETAFEIVQRGLTLLGG-GTVTLSDSSSNVIFGSADDVTLTNVDNTISGAGQLGDGHLTLVNEGTIVADGSNALVIDTGDNAVINSGTLEATGTGGLNVHSDVVNNGLVWANGGDLDFDGNVTGSGSALLSGHASIELGGAFN 6261
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Match: A0A2W7BYR8_9HYPH (Uncharacterized protein (Fragment) n=2 Tax=Mesorhizobium kowhaii TaxID=1300272 RepID=A0A2W7BYR8_9HYPH) HSP 1 Score: 65.5 bits (158), Expect = 7.640e-9 Identity = 69/207 (33.33%), Postives = 88/207 (42.51%), Query Frame = 1 Query: 1 NTAIDIDAGSALLVDGSSRINGGLINLGAGVEADLRGTTLDGVTINGDVFS-ANSISNTXXXXXXXXGTWTLASSGALTDL-VFTGAQTIGGNATIVMGDHTNNRIVNNNV-VTTIGANTTIRGAGQLGANSGGFDNQGTILAEGGSALVIDVNALGFANNGILNAQGTGGLHITGAT-----VFANNTAIDIDAGSALLVDGSSRI 597 N + + AG + V G S G IN E VT NG S A+ GT L +GA T L V T+ G +V+ D N I VT + TI GAGQLG +NQGTI+A G ALVID +N+G A G+GGL I GA ++AN D+ G + DG + I Sbjct: 792 NALVTVGAGETITVQGVSASELGAINFLFNQEP---------VTHNGGTMSIADGAIMPLGGAVDNTGTIALNGAGATTQLEVIASGITLHGGGQVVLSDSDANVISGTAADVTLTNVDNTISGAGQLGGGLLSLNNQGTIIATGTHALVIDTGGSTVSNSGTFEATGSGGLAINGAVANSGLIWANGG--DVTIGGQVTGDGDAII 987 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104317.916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104317.916.1 >prot_M-pyrifera_M_contig104317.916.1 ID=prot_M-pyrifera_M_contig104317.916.1|Name=mRNA_M-pyrifera_M_contig104317.916.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp NTAIDIDAGSALLVDGSSRINGGLINLGAGVEADLRGTTLDGVTINGDVFback to top mRNA from alignment at M-pyrifera_M_contig104317:12..641+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104317.916.1 ID=mRNA_M-pyrifera_M_contig104317.916.1|Name=mRNA_M-pyrifera_M_contig104317.916.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig104317:12..641+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104317:12..641+ >mRNA_M-pyrifera_M_contig104317.916.1 ID=mRNA_M-pyrifera_M_contig104317.916.1|Name=mRNA_M-pyrifera_M_contig104317.916.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig104317:12..641+ (Macrocystis pyrifera P11B4 male)back to top |