mRNA_M-pyrifera_M_contig103600.762.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A3D4UUQ6_9BACT (Uncharacterized protein n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3D4UUQ6_9BACT) HSP 1 Score: 194 bits (492), Expect = 1.900e-53 Identity = 118/200 (59.00%), Postives = 155/200 (77.50%), Query Frame = 1 Query: 43 VTQTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSIFDNGEFINFXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIFRNSKPFKYLHTKDGLSGAFPQYFAENEQDGSIWIAHHGNGLDRYKDGKVENITSEDGLVSDYLTFVGFSKDGTAYVGSETGISVLTKKIVSVLDNKIDGID-NSAINIVNQDGDGTVWLG 639 V + EDGLV++ IW II D + RIWIGT+ GLSIF+NG+F NF XXXXXXXXXXXXXXXXXXXXXXXX GI IFR KP+K+ + +DGL+G F Q+F +N D +IWIAHHG+GLD +KDGK+E IT +GL S++LT++GFSKDGT YVGSE G+S+LTKK+++ +D GID N +I++V ++ + T+W+G Sbjct: 193 VISKYNEEDGLVANTIWRIINDRQGRIWIGTDNGLSIFENGKFTNFTSXXXXXXXXXXXXXXXXXXXXXXXXXGGGIAIFREMKPYKFYNKEDGLNGEFIQFFGQNPIDSTIWIAHHGDGLDVFKDGKIEAITENEGLPSNFLTYIGFSKDGTGYVGSEMGLSILTKKLINTIDKNTPGIDSNPSISVV-EENNNTIWIG 391
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A3D1GAL6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GAL6_9BACT) HSP 1 Score: 150 bits (378), Expect = 2.750e-40 Identity = 77/211 (36.49%), Postives = 115/211 (54.50%), Query Frame = 1 Query: 1 GLYGSGLSLFDGEKVTQTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSIFDNGEFINFXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIFRNSKPFKYLHTKDGLSGAFPQYFAENEQDGSIWIAHHGNGLDRYKDGKVENITSEDGLVSDYLTFVGFSKDGTAYVGSETGISVLTKKIVSVLDNKIDGIDNSAINIVNQDGDGTVW 633 G Y G+S+ + V T GL D ++ I TDS+N +WIGT GLSI+ NG F +K GIVIFR++KP +YL K+GLSG E+ DGSIW++++G+G+DR +G +EN+ S DGL+SD+ + F AY+G+ G+++L + V V+D G ++++N V + DGTVW Sbjct: 147 GDYLHGVSVIYQDSVIFTIDEASGLAGDRVFRIFTDSRNNVWIGTTNGLSIYRNGSLTTFSTENGLPENSIKVIKELKNGEIWVATEKSGIVIFRDTKPVRYLTQKEGLSGELVSEIEEHPVDGSIWLSYYGSGVDRLFEGHIENLNSTDGLISDFTNSIMFDDRNRAYIGTNIGMTILIPRKVDVIDADTPGFGDASLNGVAEGKDGTVW 357
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A3D4UVM0_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3D4UVM0_9BACT) HSP 1 Score: 130 bits (326), Expect = 3.790e-32 Identity = 103/217 (47.47%), Postives = 134/217 (61.75%), Query Frame = 1 Query: 1 GLYGSGLSLFDGEKVTQTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSIFDNGEFINFXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIFRNSKPFKYLHTKDGLSGAFPQYFAENEQDGSIWIAHHGNGLDRYKDGKVENITSEDGLVSDYLTFVGFSKDGTAYVGSETGISVLTKKIVSVLD-NKIDGIDNSAINIVNQDGDGTVWLGTDG 648 G YG+GL +F + V QT+T+E+GLV +EIW++ D R+WIGTN G+S+ G XXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIF++ KP KYLH+K+GLS Q E G R+ E I+ +GL+S+ + + + DG +G+E G+SVL K L N D + A+ + NQDG G +WLGT G Sbjct: 38 GTYGNGLKVFYQDSVYQTYTTENGLVGEEIWTLERDKVGRLWIGTNTGVSVLHEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIFKDQKPTKYLHSKEGLSNLLVQDIEEGXXX-XXXXXXLGXXXIRFNKEVKETISKSEGLISNEINTIEINSDGLILIGTEDGLSVLVPKFFQTLSLNGKDAFEEEAVTL-NQDGKGRIWLGTYG 252
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A350PH98_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A350PH98_9BACT) HSP 1 Score: 130 bits (326), Expect = 2.120e-31 Identity = 103/217 (47.47%), Postives = 134/217 (61.75%), Query Frame = 1 Query: 1 GLYGSGLSLFDGEKVTQTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSIFDNGEFINFXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIFRNSKPFKYLHTKDGLSGAFPQYFAENEQDGSIWIAHHGNGLDRYKDGKVENITSEDGLVSDYLTFVGFSKDGTAYVGSETGISVLTKKIVSVLD-NKIDGIDNSAINIVNQDGDGTVWLGTDG 648 G YG+GL +F + V QT+T+E+GLV +EIW++ D R+WIGTN G+S+ G XXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIF++ KP KYLH+K+GLS Q E G R+ E I+ +GL+S+ + + + DG +G+E G+SVL K L N D + A+ + NQDG G +WLGT G Sbjct: 143 GTYGNGLKVFYQDSVYQTYTTENGLVGEEIWTLERDKVGRLWIGTNTGVSVLHEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIFKDQKPTKYLHSKEGLSNLLVQDIEEGXXX-XXXXXXLGXXXIRFNKEVKETISKSEGLISNEINTIEINSDGLILIGTEDGLSVLVPKFFQTLSLNGKDAFEEEAVTL-NQDGKGRIWLGTYG 357
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A1B6Y656_9BACT (Uncharacterized protein n=7 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A1B6Y656_9BACT) HSP 1 Score: 120 bits (301), Expect = 8.820e-28 Identity = 99/217 (45.62%), Postives = 128/217 (58.99%), Query Frame = 1 Query: 1 GLYGSGLSLFDGEKVTQTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSIFDNGEFINFXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIFRNSKPFKYLHTKDGLSGAFPQYFAENEQDGSIWIAHHGNGLDRYKDGKVENITSEDGLVSDYLTFVGFSKDGTAYVGSETGISVLTKKIVSVLD-NKIDGIDNSAINIVNQDGDGTVWLGTDG 648 G YG+GL +F + + QT+T+E GLV +EIW++ D R+WIGTN G+S+ G XXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIF++ KP KYLHTK R+ E I+ +GL+SD + + + DG +G+E G+SVL K S L N D + A+ + NQDG+G +WLGT G Sbjct: 143 GTYGNGLKVFYQDSIYQTYTTEHGLVGEEIWTLERDKVGRLWIGTNTGVSVLHEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKEGIVIFKDQKPTKYLHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RFNKEVKETISKSEGLISDEINTIEINSDGLILIGTEDGLSVLVPKFFSTLSLNGKDPFEEEAVTL-NQDGEGRIWLGTYG 357
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: UPI0019910CAA (Uncharacterized protein n=1 Tax=Akkermansiaceae bacterium TaxID=2562705 RepID=UPI0019910CAA) HSP 1 Score: 58.9 bits (141), Expect = 1.420e-6 Identity = 27/58 (46.55%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 1 GLYGSGLSLFDGEKVTQTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSIFDNGEFI 174 G GSGL +DGEK+ Q F +DGL ++ I S+ +D NR+W+GT++G+S+FD E++ Sbjct: 564 GTRGSGLFRYDGEKLRQ-FDRKDGLGANSISSVFSDRDNRLWVGTSQGVSLFDGQEWV 620
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A7T0C5C0_9BACT (Uncharacterized protein n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0C5C0_9BACT) HSP 1 Score: 58.2 bits (139), Expect = 1.680e-6 Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 1 Query: 1 GLYGSGLSLFDGEKVT-QTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSIFDNGEFINF 180 G +G GL+L D E T +TFT +DGL + I I NR+WIGTN GLS FD +F NF Sbjct: 215 GSWGGGLTLLDPETETLRTFTVQDGLPGNYILEIKEGPDNRLWIGTNAGLSRFDGAQFTNF 275
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A2T6AI42_9FLAO (Two component regulator with propeller domain n=2 Tax=Gramella gaetbulicola TaxID=703340 RepID=A0A2T6AI42_9FLAO) HSP 1 Score: 58.2 bits (139), Expect = 1.850e-6 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 1 Query: 16 GLSLFDGEKVTQTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSIFDNGEFINF 180 G+S DG VT + S DGL+S+++WS+ D K IWIGT EG+ +FD EF F Sbjct: 124 GISSVDGNIVTNYYES-DGLISNDVWSVAADDKGNIWIGTIEGMCVFDGEEFKAF 177
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A1S1NDG8_9GAMM (Histidine kinase n=2 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A1S1NDG8_9GAMM) HSP 1 Score: 58.5 bits (140), Expect = 1.990e-6 Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 1 Query: 265 EGIVIFRNSKPFKYLHTKDGLSGAF------PQYFAENEQ-DGSIWIAHHGNGLDRYKDGKVENITSEDGLVSDYLTFVGFSKDGTAYVGSETGISVL 537 E ++ R S KY+ KD + F P + + + +G++W GNGL RY +G+++NI ++DGLVSD + + + G +V SE G+S++ Sbjct: 442 EILISSRTSGLLKYVDHKDAIEPYFSPTIKAPSHVSSMKSIEGALWFGSIGNGLFRYNNGQLDNINTQDGLVSDLVFMLERDQYGNVWVASELGLSLV 539
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Match: A0A5H2XWV9_9GAMM (Histidine kinase n=1 Tax=Pseudoalteromonas sp. A25 TaxID=116092 RepID=A0A5H2XWV9_9GAMM) HSP 1 Score: 57.8 bits (138), Expect = 3.620e-6 Identity = 31/101 (30.69%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 265 EGIVIFRNSKPFKYLHTKDGLSGAF------PQYFAENEQ-DGSIWIAHHGNGLDRYKDGKVENITSEDGLVSDYLTFVGFSKDGTAYVGSETGISVLTKK 546 E ++ R S KY+ K+ L F P + + + G++W GNGL R+KDG++EN++++DGL+SD + + + ++ SE GIS++ + Sbjct: 442 ELLISSRTSGLLKYVADKNTLEPYFHPSIQAPSHISSMKNIAGTLWFGSIGNGLYRFKDGRLENVSTQDGLISDIVFMIEQDQYERVWIASELGISIVNSE 542 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103600.762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103600.762.1 >prot_M-pyrifera_M_contig103600.762.1 ID=prot_M-pyrifera_M_contig103600.762.1|Name=mRNA_M-pyrifera_M_contig103600.762.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp GLYGSGLSLFDGEKVTQTFTSEDGLVSDEIWSIITDSKNRIWIGTNEGLSback to top mRNA from alignment at M-pyrifera_M_contig103600:2..649- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103600.762.1 ID=mRNA_M-pyrifera_M_contig103600.762.1|Name=mRNA_M-pyrifera_M_contig103600.762.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig103600:2..649- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103600:2..649- >mRNA_M-pyrifera_M_contig103600.762.1 ID=mRNA_M-pyrifera_M_contig103600.762.1|Name=mRNA_M-pyrifera_M_contig103600.762.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103600:2..649- (Macrocystis pyrifera P11B4 male)back to top |