mRNA_M-pyrifera_M_contig102949.625.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Match: A0A2E7KAV3_9PLAN (Carbohydrate porin n=3 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KAV3_9PLAN) HSP 1 Score: 216 bits (550), Expect = 2.880e-66 Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 1 Query: 1 MKSGVISVVLLSISLACVSVRADEPAPLLISEAALEGNDLLNDSALTPISHLAGQEACCESTDGGCLGDECVGATDCGYECSESLFSRQYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 360 MKSGVISVVLLSISLACVSVRADE A LL+SEAA++GNDLL+DSAL PISH+A QEACCESTDGGCLGDECVGATDCGYECSESLFSR+YLTGDLFGARSGLAEHGVLADIQLTQFYQGV Sbjct: 1 MKSGVISVVLLSISLACVSVRADETASLLLSEAAVDGNDLLSDSALAPISHVAEQEACCESTDGGCLGDECVGATDCGYECSESLFSREYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 120
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Match: A0A518FX54_9PLAN (Carbohydrate-selective porin, OprB family n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FX54_9PLAN) HSP 1 Score: 195 bits (496), Expect = 3.200e-58 Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 1 Query: 1 MKSGVISVVLLSISLACVSVRADEPAPLLISEAALEGNDLLNDSALTPISHLAGQEACCESTDGGCLGDECVGATDCGYECSESLFSRQYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 360 MKS V SV LLSISL V V+A+E LL+SE A E NDLL+DSALTPISH+AGQEACCE+TDGGCLGDECVGATDCGYECSESLFSR+YLTGDLFGARSGLAEHGVLADIQLTQFYQGV Sbjct: 1 MKSVVFSVALLSISLVGVLVQAEETPSLLLSEVAGESNDLLSDSALTPISHVAGQEACCEATDGGCLGDECVGATDCGYECSESLFSREYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 120
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Match: A0A518AA99_9PLAN (Carbohydrate-selective porin, OprB family n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AA99_9PLAN) HSP 1 Score: 154 bits (390), Expect = 1.250e-42 Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 1 MKSGVISVVLLSISLACVSVRADEPAPLLISEAALEGNDLLNDSALTPISHLAGQEACCESTDGGCLGDECVGATDCGYECSESLFSRQYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 360 MK I LLSIS+ V+ A+EPAPLL+SE A EG+DLL+DSAL P+S+++ QE CC+S DECVG DCGY+CSE L SRQYLTGDLFGARSGLAEHGV+ADIQLTQFYQGV Sbjct: 1 MKPSAICWTLLSISMFGVAAWAEEPAPLLLSETAGEGSDLLSDSALAPVSYVSEQEPCCDSP------DECVGTADCGYQCSEDLLSRQYLTGDLFGARSGLAEHGVIADIQLTQFYQGV 114
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Match: A0A517RP82_9PLAN (Carbohydrate-selective porin, OprB family n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RP82_9PLAN) HSP 1 Score: 145 bits (367), Expect = 3.450e-39 Identity = 77/127 (60.63%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 1 MKSGVISVVLLSISLACVSVRADEPAPLLISEAAL-------EGNDLLNDSALTPISHLAGQEACCESTDGGCLGDECVGATDCGYECSESLFSRQYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 360 MKS IS LLS+SL+C V A E +SE+++ + N+ +D+ L PIS+ QE CC+S D CLGDECV A DCGY CSESLFSR+YLTGDLFGARS LAEHGV+ADIQLTQFYQGV Sbjct: 1 MKSAAISFALLSMSLSCPPVLAGEQVEFSVSESSIPFFETTVKSNEPFDDAGLAPISYSESQETCCDSPDDCCLGDECVAAADCGYACSESLFSREYLTGDLFGARSRLAEHGVIADIQLTQFYQGV 127
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Match: A0A2E2C6B2_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C6B2_9PLAN) HSP 1 Score: 145 bits (365), Expect = 6.730e-39 Identity = 80/127 (62.99%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 1 MKSGVISVVLLSISLACVSVRADEPAPLLISEAA-------LEGNDLLNDSALTPISHLAGQEACCESTDGGCLGDECVGATDCGYECSESLFSRQYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 360 MKS VIS LLS+SL+ V A E +SE++ +E N D+ L PISH+ GQEAC ES G CL D+CVGA DCGYE SE LFSR+YLTGDLFGARSGLAEHGV+ADIQLTQFYQGV Sbjct: 1 MKSAVISFALLSMSLSYPPVFAGEQVEFSVSESSSPFLETMVESNQPFADAELAPISHVTGQEACFESAAGDCLSDDCVGAADCGYEFSECLFSREYLTGDLFGARSGLAEHGVIADIQLTQFYQGV 127
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Match: A0A517XCT1_9PLAN (Carbohydrate-selective porin, OprB family n=1 Tax=Gimesia maris TaxID=122 RepID=A0A517XCT1_9PLAN) HSP 1 Score: 131 bits (329), Expect = 1.060e-33 Identity = 73/127 (57.48%), Postives = 86/127 (67.72%), Query Frame = 1 Query: 1 MKSGVISVVLLSISLACVSVRADEPAPLLISEAA-------LEGNDLLNDSALTPISHLAGQEACCESTDGGCLGDECVGATDCGYECSESLFSRQYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 360 MKS VIS LLSISL+ V A+E +SE++ +E + LTPIS+ Q+ CCES G CL DECV A DCGY CS+ + SRQYLTGDLFGARSGLA+HGV A+IQLTQFYQGV Sbjct: 1 MKSTVISFTLLSISLSLPPVFAEEQLEFSVSESSSPFLETKVESKKSFAAAGLTPISYAESQDTCCESAVGDCLRDECVAAADCGYACSDCILSRQYLTGDLFGARSGLADHGVNAEIQLTQFYQGV 127
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Match: A0A517Z7L1_9PLAN (Porin B n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z7L1_9PLAN) HSP 1 Score: 61.6 bits (148), Expect = 1.220e-8 Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 121 LNDSALTPISHLAG-QEACCESTDGGCLGDECVGATDCGYECSESLFSRQYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 360 +++S L + H Q+A C+++D GC G G+ S+ L++R +L GD G RS +A HG++ADI LTQFYQGV Sbjct: 46 VDESDLISVGHWTSRQDAACDASDAGCDGSLP------GHATSDDLWTRSHLGGDWGGLRSAMAGHGIIADISLTQFYQGV 120
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Match: A0A2G2JV45_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2JV45_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 1.730e-6 Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 1 Query: 205 DECVGATDCGYECSESLFSRQYLTGDLFGARSGLAEHGVLADIQLTQFYQGV 360 +EC G C +C L SR L GDL G +S LA+HG++AD++L+Q+YQGV Sbjct: 44 EECGG---CDVQCQHCLGSRDRLFGDLLGPKSHLAQHGIIADLRLSQYYQGV 92 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102949.625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102949.625.1 >prot_M-pyrifera_M_contig102949.625.1 ID=prot_M-pyrifera_M_contig102949.625.1|Name=mRNA_M-pyrifera_M_contig102949.625.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp MKSGVISVVLLSISLACVSVRADEPAPLLISEAALEGNDLLNDSALTPISback to top mRNA from alignment at M-pyrifera_M_contig102949:297..656+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102949.625.1 ID=mRNA_M-pyrifera_M_contig102949.625.1|Name=mRNA_M-pyrifera_M_contig102949.625.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=360bp|location=Sequence derived from alignment at M-pyrifera_M_contig102949:297..656+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102949:297..656+ >mRNA_M-pyrifera_M_contig102949.625.1 ID=mRNA_M-pyrifera_M_contig102949.625.1|Name=mRNA_M-pyrifera_M_contig102949.625.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig102949:297..656+ (Macrocystis pyrifera P11B4 male)back to top |