mRNA_M-pyrifera_M_contig102544.548.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: A0A6U1TWX4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A6U1TWX4_9EUKA) HSP 1 Score: 253 bits (645), Expect = 2.660e-76 Identity = 133/215 (61.86%), Postives = 171/215 (79.53%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTNK-TPSYEALRPSSRPGVPAAEQTLEERLRVDPVAFAKIALPPSILKTYVRYAKTHIRPQ 642 KSQML +V IAPRG+ VCG+Y++ +GLTVTL+REKGTGDY+IEAGAL+LAD+GICCIDEFDKM+ DH SLLEAMEQQ VS+AKAGIVCTLPAR +VIAA NP AGHY KT++ENL+IS AMLSRFDLIF+L+D+P+ D+LLS+HV+A+H T + + + S+ G+ +A +L RL V+P FA ALPP++L+ Y+ YAK + P+ Sbjct: 377 KSQMLLAVNQIAPRGVYVCGSYASSAGLTVTLAREKGTGDYAIEAGALVLADQGICCIDEFDKMSKDHQSLLEAMEQQSVSLAKAGIVCTLPARASVIAAANPVAGHYDKAKTVSENLRISQAMLSRFDLIFILMDKPNEDYDQLLSEHVMAMHAAPHTKAKLSGKSFSQEGLGSA--SLRSRLHVNPEEFAPNALPPAMLRKYIGYAKKWVHPK 589
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: L8GY26_ACACA (MCM8 protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GY26_ACACA) HSP 1 Score: 244 bits (622), Expect = 1.650e-75 Identity = 121/215 (56.28%), Postives = 165/215 (76.74%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTNKTPSYEALRPSSRPGVPAAEQTLEERLRVDPVAF-AKIALPPSILKTYVRYAKTHIRPQ 642 KSQ+L +V N+APRG+ VCG+YS+ SGLTVTL +EKG+GDY++EAGAL+L D+G+CCIDEFDKM ++H SLLEAMEQQ +SIAKAGIVC+LPARTAVIAA NP GHY KT+AENLK+S A+LSRFDL+F+L+D+PD +D+++SDHV+ALH+ + + + P ++L +RL DP A +PP +++ Y+ YAK ++ P+ Sbjct: 99 KSQLLQAVSNVAPRGVYVCGSYSSSSGLTVTLFKEKGSGDYALEAGALILGDQGVCCIDEFDKMPNEHQSLLEAMEQQSISIAKAGIVCSLPARTAVIAAANPVGGHYNRAKTVAENLKMSEAVLSRFDLVFILLDKPDEQRDQMISDHVMALHSAQKKVHRKRKKVENEEDPTKRKSLLQRL--DPSLIPADTLIPPLLVRKYIAYAKKYVSPK 311
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: A0A6A5BL37_NAEFO (MCM domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BL37_NAEFO) HSP 1 Score: 233 bits (595), Expect = 1.040e-68 Identity = 121/221 (54.75%), Postives = 164/221 (74.21%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALH---TNKTPS----YEALRPSSRPGVPAAEQTLEERLRVDPVAFAKIALPPSILKTYVRYAKTHIRPQ 642 KSQ+L +V +IAPRG+ VCG ++ SGLTVT++R+ TGD+S+EAGAL+LADRG CCIDEFDKM+S+H +LLEAMEQQ +S+AKAGIVC LPAR +V AA NP GHY KT+ ENLKI+PA+LSRFDLIF+L+D+PD ++D+LLS+HV+ LH TN+T S + S+ G +Q+L+E LR I +PP +L+ Y+ YA+ ++ P+ Sbjct: 388 KSQLLTAVSHIAPRGIYVCGNTTSTSGLTVTVTRDSATGDFSLEAGALVLADRGCCCIDEFDKMSSEHQALLEAMEQQSISVAKAGIVCNLPARCSVAAAANPVGGHYNRAKTVGENLKINPALLSRFDLIFILLDKPDELRDKLLSEHVLKLHSGSTNRTGSALSTFTTKHALSQVGTQHGQQSLKEILRPKKGESFDI-IPPRLLRKYIAYARQYVMPK 607
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: A0A812BRI1_SEPPH (MCM8 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812BRI1_SEPPH) HSP 1 Score: 225 bits (574), Expect = 1.630e-68 Identity = 116/217 (53.46%), Postives = 159/217 (73.27%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTNKTPSYEALRPSSRPGVPAAE--QTLEERLRV-DPVAFAKIALPPSILKTYVRYAKTHIRPQ 642 KSQML +V +IAPR + VCG +T SGLTVTL ++ G+ D+S+EAGAL+LAD+G CCIDEFDKM + H +LLEAMEQQ +SIAKAGIVC+LPAR ++IAA NP GHY KT++ENLK+S A+LSRFDL+F+L+D+P+ + D +LS+HV+ALH K S+ G+ E QTL+ERL + +P+ F +P + + YV YA+ ++ P+ Sbjct: 78 KSQMLQAVNSIAPRSVYVCGNTTTTSGLTVTLCKDGGSNDHSLEAGALVLADQGCCCIDEFDKMGTQHQALLEAMEQQSISIAKAGIVCSLPARASIIAAANPVGGHYTKSKTVSENLKMSGALLSRFDLVFILLDKPNEIMDNMLSEHVMALHAGKRQFLSVTVQRSQHGILEKECHQTLQERLMIKEPMDF----IPAQLFRKYVAYARKYVHPR 290
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: A0A482VQU8_9CUCU (DNA helicase MCM8 n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482VQU8_9CUCU) HSP 1 Score: 230 bits (586), Expect = 2.020e-68 Identity = 125/214 (58.41%), Postives = 154/214 (71.96%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTNKTPSYEALRPSSRPGVPAAEQTLEERLRVDPVAFAKIALPPSILKTYVRYAKTHIRPQ 642 KSQML + N+APRG+ VCG ST SGLTVT++RE G G++S+EAGAL+LAD+G CCIDEFDKM + HA LLEAMEQQ +SIAKAGIVCTLP RT ++AA NP GHY KTIAENLKIS MLSRFDLIF+L+D+P+ D LLS+HV+ALH+ K+ S SS AA +L RLRV LP S+ + Y+ YA+ ++ PQ Sbjct: 411 KSQMLQACTNVAPRGVYVCGNTSTGSGLTVTMARESG-GEFSLEAGALMLADQGCCCIDEFDKMPTQHACLLEAMEQQSISIAKAGIVCTLPTRTTILAAANPAGGHYNKAKTIAENLKISSPMLSRFDLIFILLDQPNEELDMLLSEHVLALHSGKSVSNSTFNRSSA----AANTSLRGRLRVQNGEEID-HLPHSLFRKYIAYAQKYVNPQ 618
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: A0A8B8D253_CRAVI (DNA helicase MCM8-like n=2 Tax=Crassostrea TaxID=6564 RepID=A0A8B8D253_CRAVI) HSP 1 Score: 231 bits (590), Expect = 9.310e-68 Identity = 122/223 (54.71%), Postives = 160/223 (71.75%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTNKTPSYEA-------LRPSSRPGV--PAAEQTLEERLRVDPVAFAKIALPPSILKTYVRYAKTHIRPQ 642 KSQML SV NI+PR + VCG +T SGLTVTLS+E G+GD+++EAGAL+LAD+G CCIDEFDKM + H +LLEAMEQQ +SIAKAGIVC+LPART++IAA NP GHY KT++ENLK+ A+LSRFDL+F+L+D+PD D LLSDHV+ALH K S A L S+ + A++ L ERL++ P +P +L+ YV YA+ ++ P+ Sbjct: 450 KSQMLQSVANISPRSVYVCGNTTTTSGLTVTLSKEGGSGDHALEAGALVLADQGCCCIDEFDKMGNQHQALLEAMEQQSISIAKAGIVCSLPARTSIIAAANPVGGHYSKGKTVSENLKMGSALLSRFDLVFILLDKPDEEIDSLLSDHVMALHAGKNKSMAAVTVRRQNLNTSANSSILLSEADKPLSERLKISPGEHVDY-IPHQLLRKYVGYARKYVHPK 671
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: T2M3Z1_HYDVU (DNA replication licensing factor MCM8 n=3 Tax=Hydra vulgaris TaxID=6087 RepID=T2M3Z1_HYDVU) HSP 1 Score: 231 bits (588), Expect = 1.360e-67 Identity = 120/220 (54.55%), Postives = 163/220 (74.09%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTN---KTPSYEALRPSSRPGVPAA---EQTLEERLRVDPVAFAKIALPPSILKTYVRYAKTHIRPQ 642 KSQ+L +V NIAPR + VCG+ +T +GLTVTLS+E GTG+YS+EAGAL+LAD+G CCIDEFDKM S H +LLEAMEQQ +SIAKAGI+C+LPART+++AA NP GHY KT++ENLK+ A+LSRFDL+F+L+D+PD D +LS+HVV+LH+N PS R G+ ++ L ERL++D ALPP +L+ Y++YA+ ++ P+ Sbjct: 430 KSQILQAVANIAPRSVYVCGSTTTTTGLTVTLSKESGTGNYSLEAGALVLADKGCCCIDEFDKMGSQHQALLEAMEQQSISIAKAGILCSLPARTSILAAANPVGGHYNRGKTVSENLKMGSALLSRFDLVFVLLDQPDEELDGILSEHVVSLHSNLDNTIPSVTVERNKDVDGLLDQWNEDKPLIERLKIDKNESFD-ALPPQLLRKYIQYARKYVHPE 648
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: A0A8C4QAD3_EPTBU (Minichromosome maintenance 8 homologous recombination repair factor n=4 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QAD3_EPTBU) HSP 1 Score: 230 bits (587), Expect = 3.110e-67 Identity = 122/224 (54.46%), Postives = 165/224 (73.66%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTNKTP--SYEALRPSSRPGVPAA--------EQTLEERLRVDPVAFAKIALPPSILKTYVRYAKTHIRPQ 642 KSQML +V NIAPRG+ VCG +T SGLTVTL+++ +GDY++EAGAL+LA++G+CCIDEFDKM S H +L+EAMEQQ +S+AKAGIVC+LPART++IAA NP GHY KT++ENLK+ A+LSRFDL+F+L+D PD +D LLS+HV+ALH K P S A+R S PG ++ +QTL ERL+V +P +L+ YV YA+ +++P+ Sbjct: 470 KSQMLQAVCNIAPRGVYVCGNTTTSSGLTVTLTKDGASGDYALEAGALVLANQGVCCIDEFDKMTSQHQALMEAMEQQSISLAKAGIVCSLPARTSIIAAANPCGGHYNKAKTVSENLKMGSALLSRFDLVFILLDTPDEDRDHLLSEHVMALHAGKHPRLSGAAVR-CSAPGEISSISVEDLFGDQTLSERLKVGRGEMLD-TIPHQLLRKYVGYARRYVQPR 691
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: A0A8J1U1Z9_OWEFU (Ofus.G09500 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U1Z9_OWEFU) HSP 1 Score: 230 bits (586), Expect = 4.030e-67 Identity = 122/228 (53.51%), Postives = 160/228 (70.18%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTNKTPSYEALRPSSRPGVP-----------AAEQTLEERLRV---DPVAFAKIALPPSILKTYVRYAKTHIRPQ 642 KSQML SV N+APR + VCG +T SGLTVTLS++ GDY++EAGAL+LAD+G CCIDEFDKM S H +LLEAMEQQ +SIAKAGIVC+LPARTA+IAA NP GHY KT++ENLK+ A+LSRFDL+F+L+DRPD D LLS+HV+ALH + S + + R G A++ L ER++V +P+ +PP +L+ YV YA+ ++ P+ Sbjct: 461 KSQMLQSVANVAPRSVYVCGNTTTTSGLTVTLSKDNAGGDYALEAGALVLADQGCCCIDEFDKMTSQHQALLEAMEQQSISIAKAGIVCSLPARTAIIAAANPVGGHYNKAKTVSENLKLGSALLSRFDLVFILLDRPDEEMDSLLSEHVMALHAGRKQSL-GIATARRSGPSNDEDDETKRQWEADKPLSERIKVQRGEPID----PIPPQLLRKYVGYARKYVHPK 683
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Match: A0A672NZH4_SINGR (DNA helicase MCM8-like n=4 Tax=Cyprininae TaxID=2743694 RepID=A0A672NZH4_SINGR) HSP 1 Score: 221 bits (562), Expect = 5.380e-67 Identity = 118/222 (53.15%), Postives = 157/222 (70.72%), Query Frame = 1 Query: 1 KSQMLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRGICCIDEFDKMASDHASLLEAMEQQCVSIAKAGIVCTLPARTAVIAAGNPQAGHYRMEKTIAENLKISPAMLSRFDLIFLLVDRPDPVKDRLLSDHVVALHTNKTPS--------YEALRPSSRPGVPAAEQTLEERLRVDP-VAFAKIALPPSILKTYVRYAKTHIRP 639 KSQML +V N+APRG+ VCG +T SGLTV+LSR+ G+GDY++EAGAL+L D+GICCIDEFDKM S H +LLEAMEQQ +S+AKAGIVCTLPART++IAA NP GHY KT++ENLK+ A+LSRFDL+F+L+D P+ D LLS+HV+A+ K + Y S ++E+ L + L++ P AF I P +L+ YV YA+ ++ P Sbjct: 47 KSQMLQAVCNVAPRGVYVCGNTTTTSGLTVSLSRDSGSGDYALEAGALVLGDQGICCIDEFDKMGSQHQALLEAMEQQSISLAKAGIVCTLPARTSIIAAANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILLDTPNEDHDHLLSEHVMAMRAGKNGAVSSAAVTRYSTQESSISILEVSSEKPLADTLKLVPGEAFDPI--PHQLLRKYVGYARHYVHP 266 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102544.548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102544.548.1 >prot_M-pyrifera_M_contig102544.548.1 ID=prot_M-pyrifera_M_contig102544.548.1|Name=mRNA_M-pyrifera_M_contig102544.548.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp MLASVVNIAPRGMLVCGTYSTKSGLTVTLSREKGTGDYSIEAGALLLADRback to top mRNA from alignment at M-pyrifera_M_contig102544:1..642+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102544.548.1 ID=mRNA_M-pyrifera_M_contig102544.548.1|Name=mRNA_M-pyrifera_M_contig102544.548.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig102544:1..642+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102544:1..642+ >mRNA_M-pyrifera_M_contig102544.548.1 ID=mRNA_M-pyrifera_M_contig102544.548.1|Name=mRNA_M-pyrifera_M_contig102544.548.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig102544:1..642+ (Macrocystis pyrifera P11B4 male)back to top |