mRNA_M-pyrifera_M_contig101907.407.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: A0A2E8N298_9RICK (Uncharacterized protein n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E8N298_9RICK) HSP 1 Score: 113 bits (282), Expect = 1.760e-26 Identity = 60/149 (40.27%), Postives = 94/149 (63.09%), Query Frame = 1 Query: 1 VIAIGALTGVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAPYASFWRIMKREKQLFKLSSISFVFRNGPLLLLFFDI 447 ++ IG + LG Y FA T +N+PI L ENS+ PV+FQKA E+ T+ +++K+ + I+S + LS A + F VFG +W +AG + L+S +Y +A++APY SFWRI+K+EK+L + + IS +FR PL+ +FF + Sbjct: 249 ILGIGLIYSETVLGLYVFAATILNIPITLIENSIRPVLFQKAVEVSQTNSGDLGYYYLKTLRIVPILSGGLIFILSGFANLIFPFVFGDKWASAGMIVPLMSIQYFASALIAPYDSFWRILKKEKELLRNNIISLLFRYSPLIFIFFHL 397
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: A0A2D6AWZ7_9BACT (Uncharacterized protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2D6AWZ7_9BACT) HSP 1 Score: 112 bits (280), Expect = 3.380e-26 Identity = 63/160 (39.38%), Postives = 99/160 (61.88%), Query Frame = 1 Query: 1 VIAIGALTGVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAPYASFWRIMKREKQLFKLSSISFVFRNGPLLLLFFDIRFFNFLYIYSI 480 ++ IG + LG Y FA T +N+PI L ENS+ PV+FQKA E+ T+ +++K+ + I+S + LS A + F VFG +W +AG + L+S +Y+ +A++APY SFWRI+K+EK+L + + S +FR PL+ +FF + F+ I SI Sbjct: 249 ILGIGLIYSETVLGLYVFAATILNIPITLIENSIRPVLFQKAVEVSQTNNGDLGYYYLKTLRIVPILSGGLIFILSGFANLIFPFVFGDKWASAGMIVPLMSIQYLASALIAPYDSFWRILKKEKELLRNNIFSLLFRYSPLVFIFFHLSEHLFVLIISI 408
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: A0A6C1QFP6_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6C1QFP6_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 1.650e-15 Identity = 39/135 (28.89%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 25 GVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAPYASFWRIMKREKQLFKLSSISFVFRNGPLL 429 G LG + FA + +++P++L N++SPV +QKANEL NT + + + + + ++P + +++ + F+++FGS+W AG A +S Y+ I P S + ++++E LF+ + + R LL Sbjct: 278 GSSVLGLFAFATSLLDMPMRLLGNAVSPVFYQKANELQNTKPSELPHVTYRLYNRLLFLGIIPFSFVTIFGDLIFNVIFGSQWTQAGLFAGYMSVYYLFRLISGPLTSIFNVLRKESLLFRFQLVLILTRFMALL 412
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: A0A6I7R4Y0_9BACT (Uncharacterized protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A6I7R4Y0_9BACT) HSP 1 Score: 80.9 bits (198), Expect = 7.720e-15 Identity = 41/117 (35.04%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 25 GVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAPYASFWRIMKREK 375 G + +G+YTF+L +++P++LF N++SPV QKA E NT+ ++ S +F ++ L+P LS F VFG+ W+ AG + LLS Y+ ++P +S I+++EK Sbjct: 266 GFEMVGFYTFSLAMLDMPLRLFGNAISPVFTQKAAETQNTNPERVGSITKDAFLKLLLAGLIPFGLLSAFGDYIFVFVFGNNWQMAGTICRLLSVFYLFRLAVSPISSVLAIIRKEK 382
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: A0A0L0QKI2_VIRPA (Polysaccharide biosynthesis protein n=2 Tax=Virgibacillus pantothenticus TaxID=1473 RepID=A0A0L0QKI2_VIRPA) HSP 1 Score: 70.5 bits (171), Expect = 3.190e-11 Identity = 39/127 (30.71%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 25 GVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAPYASFWRIMKREKQLFKLSSISF 405 G Q LG+Y A T +N+P L NS+ V + +A + ++ + I FK ++I ++PL + L P FS+VFGS W AG A +LS I P + + + +++K+ L + F Sbjct: 253 GNQMLGFYGLANTLVNIPTLLVGNSVGDVFYGEAANIGKKEPERLKKLSIVLFKKLLLIGIIPLIVVILFGPYFFSIVFGSNWHEAGIYARILSFMVFTRLIFMPISRVFEVYEKQKEALYLDMLRF 379
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: UPI001C68B02F (oligosaccharide flippase family protein n=1 Tax=Bacillus sp. IITD106 TaxID=2864214 RepID=UPI001C68B02F) HSP 1 Score: 68.9 bits (167), Expect = 1.100e-10 Identity = 43/152 (28.29%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 25 GVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAPYASFWRIMKREKQLFKLSSISFVFRNGPLLLLFFDIRFFNFLYIYSI 480 G +LG+Y+ +L +N P+ S+S V++Q+ NE+Y +K + F +K+ IIS++P L P F LV+ +W +G ++ +++ + +++P + + ++ R K LF L +S +F +LL+ F F+ YSI Sbjct: 250 GATSLGFYSLSLRIVNAPLTFISVSVSQVLYQRLNEMYQKGEK-LRKFILKAAGILSIISIIPFCILFFWGPDLFGLVYSDKWRVSGEISRIMAFALCVRLVVSPLSPAFFVLNRVKLLFILQ-MSRLFTTSIILLIGSKFNFSTFIVFYSI 399
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: UPI001C08C586 (oligosaccharide flippase family protein n=1 Tax=Gilvimarinus agarilyticus TaxID=679259 RepID=UPI001C08C586) HSP 1 Score: 67.4 bits (163), Expect = 3.730e-10 Identity = 38/125 (30.40%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 31 QNLGYYTFALTFINLPIQLF-ENSMSPVVFQKANELY-NTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAPYASFWRIMKREKQLFKLSSI 399 + +GY FA + +++PI++ +++++P++ +KA +L + + K + F K++ IIS+ + L ++P FSL FGS WE AG +AS+LS Y+ I P + +++ E+ L + +I Sbjct: 241 EEIGYMAFATSLLDMPIKIIGDSAITPILTRKALDLQKDKNHHKLITLFKKAYLSLTIISIPGFSVLIFLSPFIFSLAFGSTWERAGEMASILSIGYMFRLISTPNSIILKLLSMERMLLAVVAI 365
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: A0A1H6G6M9_9SPHN (Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Sphingopyxis sp. YR583 TaxID=1881047 RepID=A0A1H6G6M9_9SPHN) HSP 1 Score: 64.7 bits (156), Expect = 3.290e-9 Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 4 IAIGALTGVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAP 339 IAI AL G + G++ A I LP L N++ V Q A E + +++F+S F+++ + + PL + LIAP AF+LVFG W +G+ A L+ + +L+P Sbjct: 248 IAIAALYGPREAGFFMMAQRIIALPTSLIANAVGDVYRQNATEAWRR-QREFRSLFVRTMLSLAALVVAPLAVVVLIAPEAFALVFGETWRVSGFYAQSLAVAAALQFVLSP 358
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: Q2N6D7_ERYLH (O-antigen translocase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) TaxID=314225 RepID=Q2N6D7_ERYLH) HSP 1 Score: 64.3 bits (155), Expect = 4.490e-9 Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 1 Query: 4 IAIGALTGVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAP 339 IAI AL G + G++ A I LP L N++ V Q A E Y +++ F++ F+K+ + +LP+ AL +IAP F+ +FG EW +G A L+ + I +P Sbjct: 249 IAIAALYGPREAGFFMMAQRIITLPTSLVANAVGDVYRQNATETYR-AQRSFRALFLKTLSALTALVILPIAALIIIAPDLFAFIFGDEWRVSGDYAQWLALAAGLQFIFSP 359
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Match: UPI0018AFE83C (oligosaccharide flippase family protein n=1 Tax=Hymenobacter properus TaxID=2791026 RepID=UPI0018AFE83C) HSP 1 Score: 63.9 bits (154), Expect = 6.250e-9 Identity = 29/113 (25.66%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 37 LGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKKKFQSFFIKSFKHTIIISLLPLTALSLIAPIAFSLVFGSEWENAGYVASLLSTKYVITAILAPYASFWRIMKREK 375 +G+Y+F+++ + LPI L ++++PV +QKA+E N + ++ + + + + L P +++ + F VFG +W AG L YV + + I+KR++ Sbjct: 265 VGFYSFSISLLELPINLIGSAIAPVFYQKASETQNNNPERLSEITLSLYYKMLYLGLFPFGVITIFGDLLFGYVFGKQWITAGLFTGYLGYYYVFKLTSQSTSYIYTILKRQR 377 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101907.407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101907.407.1 >prot_M-pyrifera_M_contig101907.407.1 ID=prot_M-pyrifera_M_contig101907.407.1|Name=mRNA_M-pyrifera_M_contig101907.407.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp VIAIGALTGVQNLGYYTFALTFINLPIQLFENSMSPVVFQKANELYNTSKback to top mRNA from alignment at M-pyrifera_M_contig101907:186..665- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101907.407.1 ID=mRNA_M-pyrifera_M_contig101907.407.1|Name=mRNA_M-pyrifera_M_contig101907.407.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig101907:186..665- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101907:186..665- >mRNA_M-pyrifera_M_contig101907.407.1 ID=mRNA_M-pyrifera_M_contig101907.407.1|Name=mRNA_M-pyrifera_M_contig101907.407.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig101907:186..665- (Macrocystis pyrifera P11B4 male)back to top |