Homology
BLAST of mRNA_M-pyrifera_M_contig10190.403.1 vs. uniprot
Match:
D7G8V0_ECTSI (ABC1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V0_ECTSI)
HSP 1 Score: 248 bits (634), Expect = 8.880e-75
Identity = 130/174 (74.71%), Postives = 145/174 (83.33%), Query Frame = 1
Query: 1 VDLDLTISVLSFLLSDNALFLREPLINELLDTMDELSAASYNFASAATRGLLPKSKEESTQKKLDAVWGVVQQVVESNAAKEQQGGGRGGISPGYPQLRSLFTFMSEVLSDPKTRQRLGPVLDQLGEFGREVSARIVERQATNVVRGGFGLLNVGQAFPALADVLDAVSPPSQR 522
V+LDLTISVLSFLLSDNALFLR+ LI+ELLDTMDE AASYNFAS+ATRGLLP+SKEESTQKKLDAVWGVVQQ+VE+ + GYPQLRSLF FMS++L DP+ RQ+LGPVLDQLGEF REV ARIVERQATNVVRGGF +LN QAFPALADVLD V+PP +
Sbjct: 644 VNLDLTISVLSFLLSDNALFLRDALIDELLDTMDEFGAASYNFASSATRGLLPRSKEESTQKKLDAVWGVVQQIVENXXXXXXXXXXXXXMGAGYPQLRSLFAFMSDLLGDPRRRQQLGPVLDQLGEFAREVFARIVERQATNVVRGGFEMLNPSQAFPALADVLDVVAPPRNQ 817
BLAST of mRNA_M-pyrifera_M_contig10190.403.1 vs. uniprot
Match:
A0A835Z895_9STRA (ABC1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z895_9STRA)
HSP 1 Score: 110 bits (274), Expect = 9.220e-25
Identity = 64/174 (36.78%), Postives = 100/174 (57.47%), Query Frame = 1
Query: 1 VDLDLTISVLSFLLSDNALFLREPLINELLDTMDELSAASYNFASAATRGLLPKSKEESTQKKLDAVWGVVQQVVESNAAK---EQQGGGRGGISPG--YPQLRSLFTFMSEVLSDPKTRQRLGPVLDQLGEFGREVSARIVERQATNVVRGGFGLLNVGQAFPALADVLDAVS 507
V LDLT+++L F+LS+N FLREPLI+ELLDT+D + + +ASA +RGL+ + +++L +W +V QV +S K E++ G G +P LR++ + + L+DP+ PV +L RE++A++VERQA VV FP L + +DAV+
Sbjct: 543 VTLDLTLAILDFILSENGRFLREPLIDELLDTVDSIGGLAVEYASANSRGLISAPQSAPDRERLATLWNIVVQVAQSQRRKLAVEERANGLAIADEGLDFPTLRAMALRVCDALTDPERTALYLPVAQRLAGLAREIAAQVVERQAVRVVNAAIS--RTAGVFPVLINAVDAVN 714
BLAST of mRNA_M-pyrifera_M_contig10190.403.1 vs. uniprot
Match:
A0A7S2XX88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX88_9STRA)
HSP 1 Score: 90.1 bits (222), Expect = 8.740e-18
Identity = 63/185 (34.05%), Postives = 93/185 (50.27%), Query Frame = 1
Query: 1 VDLDLTISVLSFLLSDNALFLREPLINELLDTMDELSAASYNFASAATRGLLPKSKEESTQKKLDAVWGVVQQVVESNAAKE------QQGGGRG---------GISPGYPQLRSLFTFMSEVLSDPKTRQRLGPVLDQLGEFGREVSARIVERQATNVVRGGFGLLNVGQAFPALADVLDAVSP 510
V+++L VL FL+S+N FLREPLINEL+DT D + A N AS A+ GLLP+S + +L+ + ++ Q +E + GGG G G G P L + L +P +++L P++ Q EV AR++ER A V + G + F LA++LD V P
Sbjct: 612 VNIELAGEVLDFLVSENGGFLREPLINELVDTADSVGLAGLNMASIASGGLLPRSPYTPDRARLEVLGKLLVQALERQQVQSPLPQMAMSGGGPGLTMSPALGAGAGAGLPNLVGSAQSALQYLQNPDNQKQLEPIIRQGNGILVEVFARLLERNAARVAKEGLKVAVSPLTFNPLANLLDIVLP 796
BLAST of mRNA_M-pyrifera_M_contig10190.403.1 vs. uniprot
Match:
A0A7R9YF06_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF06_9STRA)
HSP 1 Score: 72.0 bits (175), Expect = 1.680e-11
Identity = 49/168 (29.17%), Postives = 90/168 (53.57%), Query Frame = 1
Query: 1 VDLDLTISVLSFLLSDNALFLREPLINELLDTMDELSAASYNFASAATRGLLPKSKEESTQKKLDAVWGVVQQVVESNAAKEQQGGGRGGISPGYPQLRSLFTFMSEVLSDPKTRQRLGPVLDQLGEFGREVSARIVERQATNVVRGGFGLLNVGQAFPALADVLDAV 504
+ +D + ++ +LLSD FLR PL+ +++DT+D LS A+ N + A+ GLLP+ E+ +++L+++ V+ + +ES+AA G ++ L ++ +LS+ K R++ P+L EV +VER A +R L++ +A VLD +
Sbjct: 605 LSIDGIVRIVEWLLSDKGAFLRRPLVQDIVDTLDSLSLAAGNALNLASLGLLPRPGEQPDRERLESIGRVLARALESDAAYSLA------AQEGNSRIEILQRGVA-LLSNEKLREKFNPILVAALPLFNEVVVLLVERGAKRELRALVRRLDLPGVVGQVARVLDGI 765
BLAST of mRNA_M-pyrifera_M_contig10190.403.1 vs. uniprot
Match:
A0A7S3UUE8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUE8_HETAK)
HSP 1 Score: 57.8 bits (138), Expect = 1.340e-6
Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 1 VDLDLTISVLSFLLSDNALFLREPLINELLDTMDELSAASYNFASAATRGLLPKSKEESTQKKLDAVWGVVQQVVE 228
V L+L V+++L S+N FLREPLINEL++T+D L A N S AT+G LP+S + +++ + ++ Q +E
Sbjct: 582 VSLELATKVVNYLGSENGAFLREPLINELVETVDSLGIAGVNALSVATQGALPRSPYAPDRARVEVLARLLSQALE 657
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10190.403.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90 )
Total hits: 5
0 1 Expect = 8.88e-75 / Id = 74.71 Expect = 9.22e-25 / Id = 36.78 Expect = 8.74e-18 / Id = 34.05 Expect = 1.68e-11 / Id = 29.17 Expect = 1.34e-6 / Id = 40.79 Sequence D7G8V0_ECTSI A0A835Z895_9STRA A0A7S2XX88_9STRA A0A7R9YF06_9STRA A0A7S3UUE8_HETAK
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 246.5
Seed ortholog evalue 9.1e-63
Seed eggNOG ortholog 2880.D7G8V0
KEGG ko ko:K08869
Hectar predicted targeting category other localisation
EggNOG free text desc. regulation of tocopherol cyclase activity
EggNOG OGs COG0661@1,KOG1235@2759
Ec32 ortholog description ABC1 family protein
Ec32 ortholog Ec-15_004340.3
COG Functional cat. E
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko01001
Exons 5
Model size 525
Cds size 525
Stop 1
Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815519.0932972-CDS-M-pyrifera_M_contig10190:293..398 1622815519.0932972-CDS-M-pyrifera_M_contig10190:293..398 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 294..398 +
1692277447.029375-CDS-M-pyrifera_M_contig10190:293..398 1692277447.029375-CDS-M-pyrifera_M_contig10190:293..398 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 294..398 +
1622815519.107641-CDS-M-pyrifera_M_contig10190:801..924 1622815519.107641-CDS-M-pyrifera_M_contig10190:801..924 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 802..924 +
1692277447.0409656-CDS-M-pyrifera_M_contig10190:801..924 1692277447.0409656-CDS-M-pyrifera_M_contig10190:801..924 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 802..924 +
1622815519.1187139-CDS-M-pyrifera_M_contig10190:2021..2114 1622815519.1187139-CDS-M-pyrifera_M_contig10190:2021..2114 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 2022..2114 +
1692277447.0500395-CDS-M-pyrifera_M_contig10190:2021..2114 1692277447.0500395-CDS-M-pyrifera_M_contig10190:2021..2114 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 2022..2114 +
1622815519.130969-CDS-M-pyrifera_M_contig10190:3204..3276 1622815519.130969-CDS-M-pyrifera_M_contig10190:3204..3276 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 3205..3276 +
1692277447.0606563-CDS-M-pyrifera_M_contig10190:3204..3276 1692277447.0606563-CDS-M-pyrifera_M_contig10190:3204..3276 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 3205..3276 +
1622815519.1415946-CDS-M-pyrifera_M_contig10190:4148..4280 1622815519.1415946-CDS-M-pyrifera_M_contig10190:4148..4280 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 4149..4280 +
1692277447.067979-CDS-M-pyrifera_M_contig10190:4148..4280 1692277447.067979-CDS-M-pyrifera_M_contig10190:4148..4280 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig10190 4149..4280 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10190.403.1
>prot_M-pyrifera_M_contig10190.403.1 ID=prot_M-pyrifera_M_contig10190.403.1|Name=mRNA_M-pyrifera_M_contig10190.403.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
VDLDLTISVLSFLLSDNALFLREPLINELLDTMDELSAASYNFASAATRG LLPKSKEESTQKKLDAVWGVVQQVVESNAAKEQQGGGRGGISPGYPQLRS LFTFMSEVLSDPKTRQRLGPVLDQLGEFGREVSARIVERQATNVVRGGFG LLNVGQAFPALADVLDAVSPPSQR* back to top mRNA from alignment at M-pyrifera_M_contig10190:294..4280+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10190.403.1 ID=mRNA_M-pyrifera_M_contig10190.403.1|Name=mRNA_M-pyrifera_M_contig10190.403.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3987bp|location=Sequence derived from alignment at M-pyrifera_M_contig10190:294..4280+ (Macrocystis pyrifera P11B4 male)GTGGACCTCGATCTGACGATCTCTGTGCTGAGCTTTTTGCTTTCGGACAA
CGCGCTCTTCTTGAGGGAGCCGCTCATCAACGAGCTCCTCGACACCATGG
ACGAG GTAAGTCCCGAGGTTTGATTCGTGATACCCAGAGACCTGTGTTGG
TCCCTCTGTGTCTGTCTCTGGCTGTCGAGCCTCTCTTTGTTTGGCTGCCC
CCTGTCCCCGCATCCCCCACCCGATGTCCCCTGTCTCCTGTTCCCTGTGC
CTGTCCCATGTCCCCTGCCCCCTTAGAGCCTGTCTCCTATCCCCTCTCCC
AAATCCCATACTCCCTGGCAGACGTCTCCTGTATCACATTTTGGTAGACG
TTGCCCCCTTATCCCCTATCCCCTAAGTACCCTCTGTCCCCGATCCCCTG
TCACTTGCCCCATAGTCCGCTACCTCTTAGCCACGTCCCCTTTCCCCTAA
TCCTAACCCAATATCCTCTCTCCCCTATCCCCTGTCCCCGGTTGCCGGGA
GGGAGCAGTTGAGCGCCGCCTCGTACAACTTCGCGTCGGCAGCGACGAGG
GGTCTCCTGCCTAAAAGCAAGGAAGAGTCTACCCAGAAGAAGCTCGACGC
TGTATGGGGCGTGGTTCAGCAGGTGGTCGAG GTACGCGGGCCGGCGGGTG
GATGGTGTTTAAGTAGCTAACTGACTCGACAGGTGAATGAAAATATATGA
CCAAAACCTGCTGCGCTTCCTTTTTCCCGTGTGTTGTTACTACTGCCCAT
TCTCGCGCGTCTTGTGGTGTCTTTTGGCGACGACAATTGGTAGCGATTGG
TATGAACAGTCTCCTATGCGCCGCCGCCTCAACCCTTTGTGGGTAGGGTT
TGGTAGAGATTCCGAGTTGAGGCATTTTTGGCGGGGGCAAAGGGACTGAG
AAGGCTGCCGATCCAACGTTTGGGTGGAGTGAAACTACCCGGGCATGTTT
TCCTTTTTTTTTTCGTGACTTGCCGCGGTCCCTCCTAGCGCGTCGCGTCG
TTTATTTTGGGTGTGCGGACGATTTTCGACTGACGTAACATAACGTAGAA
CAACTTGGTATATCGTAGCGTTCGGCAGAATCGTTAATCCTGCAACAGTT
ACCCGGTAGTACTTACGTTAACCTTCGTAGCATTATCAGCAGTGGATGCA
TACATGGCCGGTGACGGGTGCCGGGGGGATGGTGAAAGATGGAAGGAGGG
CGGGTCATCGGCTAGGGCGGCCATCCAAGATCGGATAAGCCGACAGGTGT
AGGGATCATCAGGAAGGTATACGGTATGTACGGTAAGGATAACCGACGAG
CGGTAGCGACATCCAGTGCATGGTACAACAACGGTTCCCGACGCACGGCA
ACGATAATCGAGGAACGGTAACGGTCTCCCACGCACGGTAAGGGGAAGGG
TAACCAAAACGGGTGTAGCCGACGCGCGGTGAAGCTAGCTAGGTCTTGGC
GCCAAGTTTCTTTGCGCCGAGACTGCGGACCCAGGGATACGCTATTGTGT
GGATTGCCATGTGCTGTATGGTACTACTCGTGTTGTTTTAGCATCAGCAG
GTGTATCACTCTGAACCGGAATATAGCGACAATTCTGATGTAAAAAATCA
TTCCAATGTTCCTTATATTATGGGTCAGAGTAGTATTACAGTAGTTGGCG
TGTTCGGGCGGCACTGATTACCCCCTCTCCCTGCTTGCCCGCCCCCCCCG
CCCGCGTGCCGTCCCTCGCCCACCTCAGAGTAATGCTGCGAAGGAGCAGC
AAGGAGGCGGCAGAGGCGGGATAAGCCCGGGGTACCCCCAGCTTCGAAGC
CTGTTCACTTTTATGTCTGAG GTGCGGACCCCTTTTTTTTCTCTACTATC
AGTAGACACTGGGTGCTTTTTCTCGCGAGCGATGGACTACAATATAGAAT
AGAGATTTTCCCACCTGCTTGGTTAGCTTGAGAGTAATTTTACATCGTCG
GCGGCTGCTGCTGTTTTGTTTCTTTTTGGTCAGACTGATTGTTTTTTACT
AATTGCATTCCGTTACCTGCGTTTTTTATTTTACCGAGCTGGTCCGATAT
TGTTTGGTACCCGGTAAGGATTGGTGTCTGCTGGCACCTGCAAATTTTTG
TTACGTGACGTCTTTTTCCCCGAGAGAGGGACGCTGTTTTGACCGGTCGA
TGCGAGCGTCCTCTCCGGCGACAGTGCACGACATTGTATCGTTTTCCGGC
TGCGGTGTTGTATACGTAAGACGTACGTAAGTCTAATTTCAAGTCGCTTG
TCCGCGAAACGGGGATAAAATCCTGGATAGGTTAGTACCCGTCGTGGATT
TCAATAATTTTTGTGGGTGGTGGCTACGCCGCGATTACGATAAAGAGCTT
ATGATGGTATAGTGCGTGCAATGGGGAAAGGCGGTGTCGCGGGGCTGAAG
AGCTGCGGCGGTGCTCTCTCGCTGGCGCAGATGCCACTGCCGGGTGCGCA
TGGACGCGCAATACTTCTGCGACCTGTTTTTTTAGTGTTTTGTTTTGTTT
GCTTGTTTGTTGTGCCGTGTGGGTTGGTTGGTAGGTAGGTGTTCTTCTCC
TGTGTAGGCCTGGAAACAAACATCCCACGCTGAGGAAGTAGCAAACGCCT
CAATTTTGTGCATGCACACTCTATAATCGAGCTGTGTTTTCCCTTCCCAG
TTCCTTTGTTTACTTGCCCCAATGCTTACTTCGAACCAAAAGGTGCTTTG
CGCCACGTCTGCATTTTTATGATAGGCCAGGGAATGAAAGAAACAAAATC
GAAGAATAAAAGCATGGAAACACGAAGAGCGAAAATGTAACGCTGAGGAC
TGAGAAGCCAAAAACTTTTGCAATACCATCATTCGTGAGCTAAACGAAAA
ACTAATATATTTTTGACACTAGATCGCCCCGATCACCATCGCTCTTGCTG
GACGGTTGTAGGTGTTGAGCGATCCGAAGACGAGGCAGCGGCTCGGACCC
GTCCTCGACCAGCTCGGGGAATTTGGCCGAGAG GTAAGCCAGCTGGGGGG
GGGAATACGTGCGCGTCATGCGATTCAGTCCCTCCCTTGTCAAAACTTGT
TTTCGTTTCGTTGGGCGAGGGACCATAGAAATGTTACAGTCGTCAATCAA
TCCACCATTTGATCAACAGATCAATCATTCGCTAACAACAGGGAAGCTCC
GGCAGCCAATCAAACAAGCATTCAATCAACCATCCTTTTTACTCGATTAT
GTCCGTTTCGTTGGGATATGAGTGTGGCATCAACAGGTTATGTACGTATT
TGGTTTGCTCTTGTCGCGTGAGAATCCTCGAAATAGTTCTGTTTCGAGCC
ATGATTTGGGTTTTATATAGCGGATGAAATACGAAACAACGCATGGTACA
CGGTGCGGTTCGAATTCGTGCTGTGTGTATGTACCGTATCGAGCAAGTAG
GTTACGTCACAGAGGAGGGTGACAGAGTGTGCCTGCTACGTTTTGTCGTT
GAGGACAGCGAGGAACCCCGTTTTACCTGCCGGTGCCACAGAGTAGAATA
GCCGATGTGAGTACAATGGTGTCTCACCAACGTGATTAAGTCGCGATAGG
CGTTGTACTGACCTTTCTCCGTGGTAACCGCTTTAGGCAGCTGCTGCTGA
TGATAGTGATGCTGGTGATGCTGGCGATGCTGATGGTATTCTATTGCTGT
AATCTCTCACGAGAATGGGAGGCTCGAACCGTTTTTTTATCGCGCACGAA
ATTCCTGTTAAACCCGCCCCAACTCGAACCATCTACGTAAACTTCACCGT
TGAAACACCTCATAACTTCCTCTCTGCTCTCCCTTCCCCTCTCTTATCCG
CCCGCTGGGGGTGCTCTTGTATGTTTGTGTGCGTTTTGTGTGATGTTTTG
GTCAGGTTTCTGCCCGAATCGTAGAGCGGCAGGCGACGAACGTCGTCCGT
GGCGGGTTCGGTTTGCTCAACGTTGGTCAGGCGTTTCCTGCCCTCGCCGA
CGTCTTGGACGCCGTATCTCCCCCGAGCCAAAGGTAA back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10190:294..4280+
>mRNA_M-pyrifera_M_contig10190.403.1 ID=mRNA_M-pyrifera_M_contig10190.403.1|Name=mRNA_M-pyrifera_M_contig10190.403.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig10190:294..4280+ (Macrocystis pyrifera P11B4 male) GTGGACCTCGATCTGACGATCTCTGTGCTGAGCTTTTTGCTTTCGGACAA CGCGCTCTTCTTGAGGGAGCCGCTCATCAACGAGCTCCTCGACACCATGG ACGAGGTGGACCTCGATCTGACGATCTCTGTGCTGAGCTTTTTGCTTTCG GACAACGCGCTCTTCTTGAGGGAGCCGCTCATCAACGAGCTCCTCGACAC CATGGACGAGTTGAGCGCCGCCTCGTACAACTTCGCGTCGGCAGCGACGA GGGGTCTCCTGCCTAAAAGCAAGGAAGAGTCTACCCAGAAGAAGCTCGAC GCTGTATGGGGCGTGGTTCAGCAGGTGGTCGAGTTGAGCGCCGCCTCGTA CAACTTCGCGTCGGCAGCGACGAGGGGTCTCCTGCCTAAAAGCAAGGAAG AGTCTACCCAGAAGAAGCTCGACGCTGTATGGGGCGTGGTTCAGCAGGTG GTCGAGAGTAATGCTGCGAAGGAGCAGCAAGGAGGCGGCAGAGGCGGGAT AAGCCCGGGGTACCCCCAGCTTCGAAGCCTGTTCACTTTTATGTCTGAGA GTAATGCTGCGAAGGAGCAGCAAGGAGGCGGCAGAGGCGGGATAAGCCCG GGGTACCCCCAGCTTCGAAGCCTGTTCACTTTTATGTCTGAGGTGTTGAG CGATCCGAAGACGAGGCAGCGGCTCGGACCCGTCCTCGACCAGCTCGGGG AATTTGGCCGAGAGGTGTTGAGCGATCCGAAGACGAGGCAGCGGCTCGGA CCCGTCCTCGACCAGCTCGGGGAATTTGGCCGAGAGGTTTCTGCCCGAAT CGTAGAGCGGCAGGCGACGAACGTCGTCCGTGGCGGGTTCGGTTTGCTCA ACGTTGGTCAGGCGTTTCCTGCCCTCGCCGACGTCTTGGACGCCGTATCT CCCCCGAGCCAAAGGTAAGTTTCTGCCCGAATCGTAGAGCGGCAGGCGAC GAACGTCGTCCGTGGCGGGTTCGGTTTGCTCAACGTTGGTCAGGCGTTTC CTGCCCTCGCCGACGTCTTGGACGCCGTATCTCCCCCGAGCCAAAGGTAA back to top