mRNA_M-pyrifera_M_contig101881.398.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101881.398.1
Unique NamemRNA_M-pyrifera_M_contig101881.398.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Match: A0A7R9QGF4_9ACAR (Zinc finger protein-like 1 homolog (Fragment) n=2 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9QGF4_9ACAR)

HSP 1 Score: 85.5 bits (210), Expect = 2.050e-18
Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:    1 VVAPYLEWLKDSDYHTPHCSICRQEYS-QHDATVRLSCNHVFHPACIQNLAEQQPPHTAQADYACPTCATAIIPS 222
            +VAPYL+WL+DS+Y  P C +CRQE S +   T+RL C H++H +C+  LA + PP+TA A Y CP+C   I P+
Sbjct:   36 IVAPYLQWLEDSNYQ-PVCGLCRQELSDKSQQTIRLICYHIYHVSCLNRLANELPPNTAPAGYTCPSCHKPIFPA 109
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BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Match: E0V933_PEDHC (Zinc finger protein-like 1 homolog n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0V933_PEDHC)

HSP 1 Score: 89.4 bits (220), Expect = 3.170e-18
Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 1 
Query:    1 VVAPYLEWLKDSDYHTPHCSICRQEYSQHDATVRLSCNHVFHPACIQNLAEQQPPHTAQADYACPTCATAIIPSPEDETELALALKSVLEEQSWAKAFL 297
            +V  YL+WL+DSDY+ P C IC  E  + D  +RLSC HVFH ACI ++ ++ P  TA + Y CPTC   + P P   + +A ALK  L   +WA+A L
Sbjct:   36 IVQSYLQWLQDSDYN-PVCDICMFELKKEDC-IRLSCYHVFHWACIDDMGQKIPNTTAPSGYTCPTCKVELFPPPHLVSPVAEALKQKLASVNWARAGL 132
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BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Match: A0A210PQA4_MIZYE (Zinc finger protein-like 1 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PQA4_MIZYE)

HSP 1 Score: 88.2 bits (217), Expect = 1.460e-17
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 1 
Query:    1 VVAPYLEWLKDSDYHTPHCSICRQEYS-QHDATVRLSCNHVFHPACIQNLAEQQPPHTAQADYACPTCATAIIPSPEDETELALALKSVLEEQSWAKAFL 297
            +V  YL+WL+DSDY +P C++C +  +  ++  VRL+C  VFH  C+   A Q PP+TA A YACPTC   I P+    + +A+ L+ +L + +WA+A L
Sbjct:   36 IVKSYLQWLQDSDY-SPACTLCTKVLTADNEQCVRLTCYDVFHWHCLNRYANQMPPNTAPAGYACPTCNAGIFPAQNVASPVAVELRQMLSQVNWARAGL 134
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BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Match: UPI00188572BE (zinc finger protein-like 1 homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188572BE)

HSP 1 Score: 82.0 bits (201), Expect = 1.600e-15
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 1 
Query:    1 VVAPYLEWLKDSDYHTPHCSICRQEYSQHDATVRLSCNHVFHPACIQNLAEQQPPHTAQADYACPTCATAIIPSPEDETELALALKSVLEEQSWAKAFLSAQPAQPEPLLPSSPGPSAGGYTPTSPGA 384
            +V  YL WL+DSD   P C +C+ +   H   VRL+C HVFH +C+  LA + P +TA A Y CP C   + P     + +A  L++ L + +WA+A L        PLL + P  S GG  PT  GA
Sbjct:   36 IVQSYLHWLQDSDCD-PRCQLCKADLKDHPC-VRLTCYHVFHWSCLNELALELPANTAPAGYRCPACEEPLFPPANLVSPVADVLRAALHQVNWARAGLGL------PLLDTPP--SFGGEAPTVAGA 153
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7R9QGF4_9ACAR2.050e-1849.33Zinc finger protein-like 1 homolog (Fragment) n=2 ... [more]
E0V933_PEDHC3.170e-1845.45Zinc finger protein-like 1 homolog n=1 Tax=Pedicul... [more]
A0A210PQA4_MIZYE1.460e-1742.00Zinc finger protein-like 1 n=1 Tax=Mizuhopecten ye... [more]
UPI00188572BE1.600e-1539.06zinc finger protein-like 1 homolog n=1 Tax=Pollici... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101881contigM-pyrifera_M_contig101881:1..664 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score92.4
Seed ortholog evalue2.2e-16
Seed eggNOG ortholog45351.EDO40209
Preferred nameZFPL1
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0006355,GO:0006403,GO:0006810,GO:0008150,GO:0008270,GO:0009889,GO:0010468,GO:0010556,GO:0012505,GO:0015931,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0033036,GO:0033227,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0060255,GO:0065007,GO:0071702,GO:0071705,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.Zinc finger protein-like 1
EggNOG OGs39QDS@33154,3BI16@33208,KOG3970@1,KOG3970@2759
COG Functional cat.O
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons3
Model size525
Cds size525
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101881.398.1prot_M-pyrifera_M_contig101881.398.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101881 1..664 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815518.8365865-CDS-M-pyrifera_M_contig101881:0..1151622815518.8365865-CDS-M-pyrifera_M_contig101881:0..115Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101881 1..115 +
1692277446.9400432-CDS-M-pyrifera_M_contig101881:0..1151692277446.9400432-CDS-M-pyrifera_M_contig101881:0..115Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101881 1..115 +
1622815518.8626945-CDS-M-pyrifera_M_contig101881:173..2621622815518.8626945-CDS-M-pyrifera_M_contig101881:173..262Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101881 174..262 +
1692277446.9522314-CDS-M-pyrifera_M_contig101881:173..2621692277446.9522314-CDS-M-pyrifera_M_contig101881:173..262Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101881 174..262 +
1622815518.8768585-CDS-M-pyrifera_M_contig101881:343..6641622815518.8768585-CDS-M-pyrifera_M_contig101881:343..664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101881 344..664 +
1692277446.9614172-CDS-M-pyrifera_M_contig101881:343..6641692277446.9614172-CDS-M-pyrifera_M_contig101881:343..664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101881 344..664 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101881.398.1

>prot_M-pyrifera_M_contig101881.398.1 ID=prot_M-pyrifera_M_contig101881.398.1|Name=mRNA_M-pyrifera_M_contig101881.398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
VVAPYLEWLKDSDYHTPHCSICRQEYSQHDATVRLSCNHVFHPACIQNLA
EQQPPHTAQADYACPTCATAIIPSPEDETELALALKSVLEEQSWAKAFLS
AQPAQPEPLLPSSPGPSAGGYTPTSPGAGGSNAGGGDFSFTPVSRKAREP
GTSRLEEYPDDEDKDKYRRRGAAQL
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mRNA from alignment at M-pyrifera_M_contig101881:1..664+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101881.398.1 ID=mRNA_M-pyrifera_M_contig101881.398.1|Name=mRNA_M-pyrifera_M_contig101881.398.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=664bp|location=Sequence derived from alignment at M-pyrifera_M_contig101881:1..664+ (Macrocystis pyrifera P11B4 male)
GTGGTTGCTCCCTACCTGGAGTGGCTGAAGGACTCAGACTATCACACACC
ACACTGCAGTATATGTAGACAAGAGTACAGCCAACATGACGCCACGGTCC
GCCTCAGTTGCAACCGTGCGTCGCTTCGTTTCCCCTCGCCTCTCCTTCTG
CGCCCTCCTGACGCGCAGTGCAGATGTATTCCATCCGGCTTGCATTCAGA
ACCTTGCAGAGCAGCAGCCACCACACACAGCCCAAGCAGACTATGCATGC
CCGACTTGCGCGGTAACGCCGCCCCCCCCCCCCCCCCCCCACCCCCCCCC
CCCCCGCGCGCGCCCACTTCCAACCCCTTGCTGACAGGGGCAGACGGCAA
TCATTCCCAGCCCTGAGGACGAGACAGAGCTGGCGTTGGCATTGAAGAGC
GTGCTGGAGGAACAGTCCTGGGCAAAGGCATTTCTCAGTGCGCAGCCGGC
GCAGCCGGAGCCACTACTGCCTTCCAGCCCTGGACCATCTGCTGGAGGCT
ACACACCCACCTCTCCTGGTGCGGGAGGCAGCAACGCAGGCGGAGGCGAC
TTCTCTTTCACTCCGGTCTCAAGGAAGGCGCGTGAGCCCGGCACATCTCG
ACTGGAGGAGTACCCAGACGATGAGGACAAGGACAAGTACCGAAGGAGGG
GAGCCGCGCAGTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101881:1..664+

>mRNA_M-pyrifera_M_contig101881.398.1 ID=mRNA_M-pyrifera_M_contig101881.398.1|Name=mRNA_M-pyrifera_M_contig101881.398.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig101881:1..664+ (Macrocystis pyrifera P11B4 male)
GTGGTTGCTCCCTACCTGGAGTGGCTGAAGGACTCAGACTATCACACACC
ACACTGCAGTATATGTAGACAAGAGTACAGCCAACATGACGCCACGGTCC
GCCTCAGTTGCAACCGTGGTTGCTCCCTACCTGGAGTGGCTGAAGGACTC
AGACTATCACACACCACACTGCAGTATATGTAGACAAGAGTACAGCCAAC
ATGACGCCACGGTCCGCCTCAGTTGCAACCATGTATTCCATCCGGCTTGC
ATTCAGAACCTTGCAGAGCAGCAGCCACCACACACAGCCCAAGCAGACTA
TGCATGCCCGACTTGCGCGATGTATTCCATCCGGCTTGCATTCAGAACCT
TGCAGAGCAGCAGCCACCACACACAGCCCAAGCAGACTATGCATGCCCGA
CTTGCGCGACGGCAATCATTCCCAGCCCTGAGGACGAGACAGAGCTGGCG
TTGGCATTGAAGAGCGTGCTGGAGGAACAGTCCTGGGCAAAGGCATTTCT
CAGTGCGCAGCCGGCGCAGCCGGAGCCACTACTGCCTTCCAGCCCTGGAC
CATCTGCTGGAGGCTACACACCCACCTCTCCTGGTGCGGGAGGCAGCAAC
GCAGGCGGAGGCGACTTCTCTTTCACTCCGGTCTCAAGGAAGGCGCGTGA
GCCCGGCACATCTCGACTGGAGGAGTACCCAGACGATGAGGACAAGGACA
AGTACCGAAGGAGGGGAGCCGCGCAGTTGACGGCAATCATTCCCAGCCCT
GAGGACGAGACAGAGCTGGCGTTGGCATTGAAGAGCGTGCTGGAGGAACA
GTCCTGGGCAAAGGCATTTCTCAGTGCGCAGCCGGCGCAGCCGGAGCCAC
TACTGCCTTCCAGCCCTGGACCATCTGCTGGAGGCTACACACCCACCTCT
CCTGGTGCGGGAGGCAGCAACGCAGGCGGAGGCGACTTCTCTTTCACTCC
GGTCTCAAGGAAGGCGCGTGAGCCCGGCACATCTCGACTGGAGGAGTACC
CAGACGATGAGGACAAGGACAAGTACCGAAGGAGGGGAGCCGCGCAGTTG
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