prot_M-pyrifera_M_contig101881.398.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101881.398.1
Unique Nameprot_M-pyrifera_M_contig101881.398.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length175
Homology
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BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Match: A0A7R9QGF4_9ACAR (Zinc finger protein-like 1 homolog (Fragment) n=2 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9QGF4_9ACAR)

HSP 1 Score: 85.5 bits (210), Expect = 2.050e-18
Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:    1 VVAPYLEWLKDSDYHTPHCSICRQEYS-QHDATVRLSCNHVFHPACIQNLAEQQPPHTAQADYACPTCATAIIPS 74
            +VAPYL+WL+DS+Y  P C +CRQE S +   T+RL C H++H +C+  LA + PP+TA A Y CP+C   I P+
Sbjct:   36 IVAPYLQWLEDSNYQ-PVCGLCRQELSDKSQQTIRLICYHIYHVSCLNRLANELPPNTAPAGYTCPSCHKPIFPA 109
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BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Match: E0V933_PEDHC (Zinc finger protein-like 1 homolog n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0V933_PEDHC)

HSP 1 Score: 89.4 bits (220), Expect = 3.170e-18
Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 0 
Query:    1 VVAPYLEWLKDSDYHTPHCSICRQEYSQHDATVRLSCNHVFHPACIQNLAEQQPPHTAQADYACPTCATAIIPSPEDETELALALKSVLEEQSWAKAFL 99
            +V  YL+WL+DSDY+ P C IC  E  + D  +RLSC HVFH ACI ++ ++ P  TA + Y CPTC   + P P   + +A ALK  L   +WA+A L
Sbjct:   36 IVQSYLQWLQDSDYN-PVCDICMFELKKEDC-IRLSCYHVFHWACIDDMGQKIPNTTAPSGYTCPTCKVELFPPPHLVSPVAEALKQKLASVNWARAGL 132
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BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Match: A0A210PQA4_MIZYE (Zinc finger protein-like 1 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PQA4_MIZYE)

HSP 1 Score: 88.2 bits (217), Expect = 1.460e-17
Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 0 
Query:    1 VVAPYLEWLKDSDYHTPHCSICRQEYS-QHDATVRLSCNHVFHPACIQNLAEQQPPHTAQADYACPTCATAIIPSPEDETELALALKSVLEEQSWAKAFL 99
            +V  YL+WL+DSDY +P C++C +  +  ++  VRL+C  VFH  C+   A Q PP+TA A YACPTC   I P+    + +A+ L+ +L + +WA+A L
Sbjct:   36 IVKSYLQWLQDSDY-SPACTLCTKVLTADNEQCVRLTCYDVFHWHCLNRYANQMPPNTAPAGYACPTCNAGIFPAQNVASPVAVELRQMLSQVNWARAGL 134
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BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Match: UPI00188572BE (zinc finger protein-like 1 homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188572BE)

HSP 1 Score: 82.0 bits (201), Expect = 1.600e-15
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0 
Query:    1 VVAPYLEWLKDSDYHTPHCSICRQEYSQHDATVRLSCNHVFHPACIQNLAEQQPPHTAQADYACPTCATAIIPSPEDETELALALKSVLEEQSWAKAFLSAQPAQPEPLLPSSPGPSAGGYTPTSPGA 128
            +V  YL WL+DSD   P C +C+ +   H   VRL+C HVFH +C+  LA + P +TA A Y CP C   + P     + +A  L++ L + +WA+A L        PLL + P  S GG  PT  GA
Sbjct:   36 IVQSYLHWLQDSDCD-PRCQLCKADLKDHPC-VRLTCYHVFHWSCLNELALELPANTAPAGYRCPACEEPLFPPANLVSPVADVLRAALHQVNWARAGLGL------PLLDTPP--SFGGEAPTVAGA 153
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101881.398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7R9QGF4_9ACAR2.050e-1849.33Zinc finger protein-like 1 homolog (Fragment) n=2 ... [more]
E0V933_PEDHC3.170e-1845.45Zinc finger protein-like 1 homolog n=1 Tax=Pedicul... [more]
A0A210PQA4_MIZYE1.460e-1742.00Zinc finger protein-like 1 n=1 Tax=Mizuhopecten ye... [more]
UPI00188572BE1.600e-1539.06zinc finger protein-like 1 homolog n=1 Tax=Pollici... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 19..67
e-value: 1.3E-6
score: 37.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 18..67
e-value: 2.2E-8
score: 34.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 19..67
score: 11.693
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 8..83
e-value: 9.3E-13
score: 49.1
IPR039043Zinc finger protein-like 1PANTHERPTHR12981ZINC FINGER PROTEIN-LIKE 1coord: 1..105
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 7..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101881contigM-pyrifera_M_contig101881:1..664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101881.398.1mRNA_M-pyrifera_M_contig101881.398.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101881 1..664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101881.398.1 ID=prot_M-pyrifera_M_contig101881.398.1|Name=mRNA_M-pyrifera_M_contig101881.398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
VVAPYLEWLKDSDYHTPHCSICRQEYSQHDATVRLSCNHVFHPACIQNLA
EQQPPHTAQADYACPTCATAIIPSPEDETELALALKSVLEEQSWAKAFLS
AQPAQPEPLLPSSPGPSAGGYTPTSPGAGGSNAGGGDFSFTPVSRKAREP
GTSRLEEYPDDEDKDKYRRRGAAQL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR039043ZFPL1