mRNA_M-pyrifera_M_contig101811.386.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101811.386.1
Unique NamemRNA_M-pyrifera_M_contig101811.386.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A5A8DJC1_CAFRO (DNA polymerase epsilon catalytic subunit n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJC1_CAFRO)

HSP 1 Score: 286 bits (733), Expect = 8.560e-86
Identity = 156/246 (63.41%), Postives = 179/246 (72.76%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDADG----NPARF---------------------ADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            A+VSP TCAAC+F+S  ++ +C+R +EW WRG+ FPATRAET+ ++R QL TET +   G     PARF                     A+LPP  +   L KRLK Y QR YKRAKDT  EKR AT+CQRE+ FYIDTVRAFRDRRYE+KGLTK W K++AKAE  GD +AA  AR R VL+DSLQLAHKCILNSFYGYVMRKG+RW SMEM GVVT TGA LITQAR LVERIGRPLELDTDG
Sbjct:  589 AVVSPETCAACEFNSADNAHQCKRVMEWTWRGEVFPATRAETD-MIRRQLETETFKAPPGWRPDGPARFGASSSSSSAGGAGEPERWVPYAELPPDERDLQLHKRLKMYCQRQYKRAKDTHVEKRHATICQREHPFYIDTVRAFRDRRYEYKGLTKKWVKELAKAEKGGDKLAAEAARTRVVLFDSLQLAHKCILNSFYGYVMRKGSRWFSMEMGGVVTQTGASLITQARMLVERIGRPLELDTDG 833
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BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A5A8BYB4_CAFRO (DNA polymerase epsilon catalytic subunit n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BYB4_CAFRO)

HSP 1 Score: 286 bits (733), Expect = 1.230e-85
Identity = 156/246 (63.41%), Postives = 179/246 (72.76%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDADG----NPARF---------------------ADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            A+VSP TCAAC+F+S  ++ +C+R +EW WRG+ FPATRAET+ ++R QL TET +   G     PARF                     A+LPP  +   L KRLK Y QR YKRAKDT  EKR AT+CQRE+ FYIDTVRAFRDRRYE+KGLTK W K++AKAE  GD +AA  AR R VL+DSLQLAHKCILNSFYGYVMRKG+RW SMEM GVVT TGA LITQAR LVERIGRPLELDTDG
Sbjct:  462 AVVSPETCAACEFNSADNAHQCKRVMEWTWRGEVFPATRAETD-MIRRQLETETFKAPPGWRPDGPARFGASSSSSSAGGAGEPERWVPYAELPPDERDLQLHKRLKMYCQRQYKRAKDTHVEKRHATICQREHPFYIDTVRAFRDRRYEYKGLTKKWVKELAKAEKGGDKLAAEAARTRVVLFDSLQLAHKCILNSFYGYVMRKGSRWFSMEMGGVVTQTGASLITQARMLVERIGRPLELDTDG 706
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BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A812Q0Y1_9DINO (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q0Y1_9DINO)

HSP 1 Score: 272 bits (696), Expect = 3.100e-81
Identity = 142/221 (64.25%), Postives = 168/221 (76.02%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDADGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            A+V    CA+CDF+S     +C+R +EWVWRG+Y+P +R+E    +R   A   VE  DG P  + +LP   +   L +R+K YSQRVYKR KDT    +VAT+CQREN FY++TVRAFRDRRYE+KGLTKTW KK+  AE  GDA+    A+AR V YDSLQLAHKCILNSFYGYVMR+GARWHSMEMAGVVT+TGA LITQARELVERIGRPLELDTDG
Sbjct:  636 AIVDETICASCDFNSP--EHKCKRDMEWVWRGEYYPLSRSE----LRRIEAQLEVEVVDGVP--YPELPREEREGALKRRVKEYSQRVYKRVKDTTETSKVATICQRENPFYVETVRAFRDRRYEYKGLTKTWVKKLVAAEKGGDALEIEAAKARVVYYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGVVTYTGATLITQARELVERIGRPLELDTDG 848
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BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A6G1RZE0_9GRUI (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Hypotaenidia okinawae TaxID=2861861 RepID=A0A6G1RZE0_9GRUI)

HSP 1 Score: 250 bits (639), Expect = 5.680e-81
Identity = 130/223 (58.30%), Postives = 159/223 (71.30%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVE--DADGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            AMV  ATCAACDF+  G  A CQR + W WRG++ PA+R+E   + + QL +E       +G P  F +L    Q +   KRL  Y ++ YK+   T  E+RV T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK++ A   GDA      +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGA +ITQAREL+E+IGRPLELDTDG
Sbjct:   11 AMVDEATCAACDFNKPG--ANCQRRMTWQWRGEFMPASRSEYHRI-QQQLESEKFPPLSPEGAPRAFHELSHEEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDG 230
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BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A670JRR4_PODMU (DNA polymerase epsilon catalytic subunit n=2 Tax=Laterata TaxID=1329976 RepID=A0A670JRR4_PODMU)

HSP 1 Score: 254 bits (649), Expect = 2.750e-77
Identity = 133/223 (59.64%), Postives = 162/223 (72.65%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDA--DGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            AMV+ ATCAACDF+  G  A CQR + W WRG++ PA+R+E   + + QL +E       DG P  F +L    Q +   KRL  Y ++ YK+   T  E+RV T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK+A A  +GDA  A   +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGA +ITQAREL+E+IGRPLELDTDG
Sbjct:  304 AMVNEATCAACDFNKPG--ANCQRRMTWQWRGEFMPASRSEYHRI-QQQLESEKFPPLFPDGPPRVFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLAAAMESGDASEAKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDG 523
[Close]
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A4W5MAK6_9TELE (DNA polymerase epsilon catalytic subunit n=7 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A4W5MAK6_9TELE)

HSP 1 Score: 254 bits (648), Expect = 5.490e-77
Identity = 132/223 (59.19%), Postives = 161/223 (72.20%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDA--DGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            AMV  ATCAACDF+  G  A CQR + W WRG+  PA+R+E   + + QL +E       +G P  F +L    Q     KRL  Y +R YK+ + T  E+RV T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK++ A+ +GDA      +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V +TGA +ITQARELVE+IGRPLELDTDG
Sbjct:  315 AMVDEATCAACDFNKPG--ANCQRKMSWQWRGEIMPASRSEFHRI-QQQLESEKFPPLFPNGRPRAFHELNLEEQARHEKKRLGDYCRRAYKKVRQTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAQESGDAALVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGANIITQARELVEQIGRPLELDTDG 534
[Close]
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: UPI001C9CC4F9 (DNA polymerase epsilon catalytic subunit A n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9CC4F9)

HSP 1 Score: 261 bits (667), Expect = 9.040e-77
Identity = 135/222 (60.81%), Postives = 167/222 (75.23%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDADGNPAR-FADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            A+V+ A CAACDF+S G  A C+R +EW WRG+Y PA+  E + + R QL TETV+  DG+ AR F +LP   Q  L  KRL  Y ++ Y + K T  E R  TVCQ+EN+FY+DTVRAFRDRRYE+KGLTK   ++VA A A+GDA     A+ R+++YDSLQLAHKCILNSFYGYVMRKGARWHSMEM G+V HTGA +I +ARE++ER+GRPLELDTDG
Sbjct:  640 AIVNEAVCAACDFNSPG--AACKREMEWAWRGEYLPASLGEFQRI-RQQLETETVKSEDGSTARPFHELPLPEQAALEKKRLSDYCRKAYAKTKVTKVEIRKQTVCQKENSFYVDTVRAFRDRRYEYKGLTKMAKQQVAAAIASGDASEIKSAKNREIIYDSLQLAHKCILNSFYGYVMRKGARWHSMEMGGIVCHTGANIIMRAREIIERVGRPLELDTDG 858
[Close]
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A452IMM2_9SAUR (DNA polymerase epsilon catalytic subunit n=1 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452IMM2_9SAUR)

HSP 1 Score: 253 bits (645), Expect = 1.180e-76
Identity = 130/223 (58.30%), Postives = 160/223 (71.75%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDA--DGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            AMV  ATCAACDF+  G  A CQR + W WRG++ PA+R+E   + + QL +E +     DG P  F +L    Q +   KRL  Y ++ YK+   T  E+R+ T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK++ A   GDA      +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGA +ITQAREL+E+IGRPLELDTDG
Sbjct:  282 AMVDEATCAACDFNKPG--ANCQRRMTWQWRGEFMPASRSEYHRI-QQQLESEKLPPLYPDGPPRAFHELSREEQAKFEKKRLADYCRKAYKKLHVTKVEERITTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAATEMGDATEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDG 501
[Close]
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: UPI00145531E7 (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145531E7)

HSP 1 Score: 260 bits (665), Expect = 1.680e-76
Identity = 135/223 (60.54%), Postives = 164/223 (73.54%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDAD-GNPAR-FADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            AMV+  TCA CDF+  G  ARCQR L W+WRGD+ PATR E + + + QL  E +   + G P R F ++P   Q  +  KRL  Y ++ YK+ K T TE+R  T CQREN+FY+DTVRAFRDRRYEFKGL K W +KVA A   GDA     A+  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V +TGA +IT+ARE+VE+IGRPLELDTDG
Sbjct:  634 AMVNEVTCAGCDFNKPG--ARCQRKLPWMWRGDFLPATRGEYQRI-KQQLEMERIPPVNPGEPPRVFHEIPREEQAAMEKKRLSDYCRKAYKKTKVTRTEERTTTTCQRENSFYVDTVRAFRDRRYEFKGLLKVWKRKVAAAIEKGDAAEIKSAKNTEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGASIITRAREIVEQIGRPLELDTDG 853
[Close]
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A8C9L721_PAVCR (DNA polymerase epsilon catalytic subunit n=1 Tax=Pavo cristatus TaxID=9049 RepID=A0A8C9L721_PAVCR)

HSP 1 Score: 251 bits (642), Expect = 1.680e-76
Identity = 131/223 (58.74%), Postives = 159/223 (71.30%), Query Frame = 1 
Query:    1 AMVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDA--DGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 663
            AMV  ATCAACDF+  G  A CQR + W WRG++ PA+R+E   + + QL +E       DG P  F +L    Q +   KRL  Y ++ YK+   T  E+RV T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK++ A   GDA      +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGA +ITQAREL+E+IGRPLELDTDG
Sbjct:  275 AMVDEATCAACDFNKPG--ANCQRRMTWQWRGEFMPASRSEYHRI-QQQLESEKFPPLYPDGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDG 494
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DJC1_CAFRO8.560e-8663.41DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
A0A5A8BYB4_CAFRO1.230e-8563.41DNA polymerase epsilon catalytic subunit n=4 Tax=C... [more]
A0A812Q0Y1_9DINO3.100e-8164.25DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A6G1RZE0_9GRUI5.680e-8158.30DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A670JRR4_PODMU2.750e-7759.64DNA polymerase epsilon catalytic subunit n=2 Tax=L... [more]
A0A4W5MAK6_9TELE5.490e-7759.19DNA polymerase epsilon catalytic subunit n=7 Tax=E... [more]
UPI001C9CC4F99.040e-7760.81DNA polymerase epsilon catalytic subunit A n=1 Tax... [more]
A0A452IMM2_9SAUR1.180e-7658.30DNA polymerase epsilon catalytic subunit n=1 Tax=G... [more]
UPI00145531E71.680e-7660.54DNA polymerase epsilon catalytic subunit A-like n=... [more]
A0A8C9L721_PAVCR1.680e-7658.74DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101811contigM-pyrifera_M_contig101811:3..665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score256.1
Seed ortholog evalue1.4e-65
Seed eggNOG ortholog7668.SPU_025749-tr
KEGG rclassRC02795
KEGG koko:K02324
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko05166,map00230,map00240,map01100,map03030,map03410,map03420,map05166
KEGG ModuleM00263
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000278,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006281,GO:0006284,GO:0006287,GO:0006289,GO:0006297,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0007113,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008622,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0018130,GO:0019438,GO:0022616,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035265,GO:0040007,GO:0042575,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045004,GO:0045005,GO:0046483,GO:0048589,GO:0050896,GO:0051716,GO:0061695,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.DNA replication proofreading
EggNOG OGs38CFB@33154,3BBCV@33208,3CUK2@33213,COG0417@1,KOG1798@2759
EC2.7.7.7
COG Functional cat.L
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Exons1
Model size663
Cds size660
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815518.0641108-CDS-M-pyrifera_M_contig101811:2..6621622815518.0641108-CDS-M-pyrifera_M_contig101811:2..662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101811 3..662 -
1692277446.5558896-CDS-M-pyrifera_M_contig101811:2..6621692277446.5558896-CDS-M-pyrifera_M_contig101811:2..662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101811 3..662 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815518.0797074-UTR-M-pyrifera_M_contig101811:662..6651622815518.0797074-UTR-M-pyrifera_M_contig101811:662..665Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101811 663..665 -
1692277446.5664601-UTR-M-pyrifera_M_contig101811:662..6651692277446.5664601-UTR-M-pyrifera_M_contig101811:662..665Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101811 663..665 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101811.386.1prot_M-pyrifera_M_contig101811.386.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101811 3..662 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101811.386.1

>prot_M-pyrifera_M_contig101811.386.1 ID=prot_M-pyrifera_M_contig101811.386.1|Name=mRNA_M-pyrifera_M_contig101811.386.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLA
TETVEDADGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRV
ATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAE
ARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLI
TQARELVERIGRPLELDTDG
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mRNA from alignment at M-pyrifera_M_contig101811:3..665-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101811.386.1 ID=mRNA_M-pyrifera_M_contig101811.386.1|Name=mRNA_M-pyrifera_M_contig101811.386.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=663bp|location=Sequence derived from alignment at M-pyrifera_M_contig101811:3..665- (Macrocystis pyrifera P11B4 male)
GCCATGGTTTCTCCAGCCACATGTGCAGCGTGTGATTTCTCTTCTGTTGG
CGATTCTGCTCGTTGCCAGCGGCACCTCGAGTGGGTGTGGCGTGGGGATT
ACTTCCCAGCCACCCGCGCTGAAACGGAGGGCGTGGTTCGGCATCAACTG
GCTACTGAAACTGTGGAGGATGCGGATGGGAATCCAGCTAGGTTCGCAGA
CTTGCCCCCTTCGAGGCAGCATGAGCTTTTGGTGAAGCGGCTCAAGACCT
ACTCACAGCGCGTCTACAAGCGGGCAAAGGACACAGCGACGGAAAAACGC
GTCGCCACAGTGTGTCAGCGGGAAAACGCATTCTACATTGACACCGTCAG
AGCATTCCGAGATCGGCGCTACGAATTCAAGGGCCTCACCAAGACTTGGA
GCAAGAAGGTGGCCAAGGCAGAAGCTGCCGGAGATGCCATCGCTGCTGCT
GAAGCCAGGGCCAGACAAGTGCTCTACGACTCCCTGCAGCTCGCGCACAA
GTGCATCCTCAACTCCTTCTACGGCTACGTCATGCGGAAGGGCGCCAGGT
GGCACTCCATGGAAATGGCCGGCGTCGTGACGCACACGGGCGCCAGGCTC
ATCACGCAAGCCAGGGAACTCGTAGAGCGCATCGGAAGACCGCTCGAACT
CGACACGGACGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101811:3..665-

>mRNA_M-pyrifera_M_contig101811.386.1 ID=mRNA_M-pyrifera_M_contig101811.386.1|Name=mRNA_M-pyrifera_M_contig101811.386.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig101811:3..665- (Macrocystis pyrifera P11B4 male)
ATGGTTTCTCCAGCCACATGTGCAGCGTGTGATTTCTCTTCTGTTGGCGA
TTCTGCTCGTTGCCAGCGGCACCTCGAGTGGGTGTGGCGTGGGGATTACT
TCCCAGCCACCCGCGCTGAAACGGAGGGCGTGGTTCGGCATCAACTGGCT
ACTGAAACTGTGGAGGATGCGGATGGGAATCCAGCTAGGTTCGCAGACTT
GCCCCCTTCGAGGCAGCATGAGCTTTTGGTGAAGCGGCTCAAGACCTACT
CACAGCGCGTCTACAAGCGGGCAAAGGACACAGCGACGGAAAAACGCGTC
GCCACAGTGTGTCAGCGGGAAAACGCATTCTACATTGACACCGTCAGAGC
ATTCCGAGATCGGCGCTACGAATTCAAGGGCCTCACCAAGACTTGGAGCA
AGAAGGTGGCCAAGGCAGAAGCTGCCGGAGATGCCATCGCTGCTGCTGAA
GCCAGGGCCAGACAAGTGCTCTACGACTCCCTGCAGCTCGCGCACAAGTG
CATCCTCAACTCCTTCTACGGCTACGTCATGCGGAAGGGCGCCAGGTGGC
ACTCCATGGAAATGGCCGGCGTCGTGACGCACACGGGCGCCAGGCTCATC
ACGCAAGCCAGGGAACTCGTAGAGCGCATCGGAAGACCGCTCGAACTCGA
CACGGACGGAATGGTTTCTCCAGCCACATGTGCAGCGTGTGATTTCTCTT
CTGTTGGCGATTCTGCTCGTTGCCAGCGGCACCTCGAGTGGGTGTGGCGT
GGGGATTACTTCCCAGCCACCCGCGCTGAAACGGAGGGCGTGGTTCGGCA
TCAACTGGCTACTGAAACTGTGGAGGATGCGGATGGGAATCCAGCTAGGT
TCGCAGACTTGCCCCCTTCGAGGCAGCATGAGCTTTTGGTGAAGCGGCTC
AAGACCTACTCACAGCGCGTCTACAAGCGGGCAAAGGACACAGCGACGGA
AAAACGCGTCGCCACAGTGTGTCAGCGGGAAAACGCATTCTACATTGACA
CCGTCAGAGCATTCCGAGATCGGCGCTACGAATTCAAGGGCCTCACCAAG
ACTTGGAGCAAGAAGGTGGCCAAGGCAGAAGCTGCCGGAGATGCCATCGC
TGCTGCTGAAGCCAGGGCCAGACAAGTGCTCTACGACTCCCTGCAGCTCG
CGCACAAGTGCATCCTCAACTCCTTCTACGGCTACGTCATGCGGAAGGGC
GCCAGGTGGCACTCCATGGAAATGGCCGGCGTCGTGACGCACACGGGCGC
CAGGCTCATCACGCAAGCCAGGGAACTCGTAGAGCGCATCGGAAGACCGC
TCGAACTCGACACGGACGGA
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