prot_M-pyrifera_M_contig101811.386.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig101811.386.1
Unique Nameprot_M-pyrifera_M_contig101811.386.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length220
Homology
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A5A8DJC1_CAFRO (DNA polymerase epsilon catalytic subunit n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJC1_CAFRO)

HSP 1 Score: 286 bits (731), Expect = 1.550e-85
Identity = 155/245 (63.27%), Postives = 178/245 (72.65%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDADG----NPARF---------------------ADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            +VSP TCAAC+F+S  ++ +C+R +EW WRG+ FPATRAET+ ++R QL TET +   G     PARF                     A+LPP  +   L KRLK Y QR YKRAKDT  EKR AT+CQRE+ FYIDTVRAFRDRRYE+KGLTK W K++AKAE  GD +AA  AR R VL+DSLQLAHKCILNSFYGYVMRKG+RW SMEM GVVT TGA LITQAR LVERIGRPLELDTDG
Sbjct:  590 VVSPETCAACEFNSADNAHQCKRVMEWTWRGEVFPATRAETD-MIRRQLETETFKAPPGWRPDGPARFGASSSSSSAGGAGEPERWVPYAELPPDERDLQLHKRLKMYCQRQYKRAKDTHVEKRHATICQREHPFYIDTVRAFRDRRYEYKGLTKKWVKELAKAEKGGDKLAAEAARTRVVLFDSLQLAHKCILNSFYGYVMRKGSRWFSMEMGGVVTQTGASLITQARMLVERIGRPLELDTDG 833          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A5A8BYB4_CAFRO (DNA polymerase epsilon catalytic subunit n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BYB4_CAFRO)

HSP 1 Score: 286 bits (731), Expect = 2.190e-85
Identity = 155/245 (63.27%), Postives = 178/245 (72.65%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDADG----NPARF---------------------ADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            +VSP TCAAC+F+S  ++ +C+R +EW WRG+ FPATRAET+ ++R QL TET +   G     PARF                     A+LPP  +   L KRLK Y QR YKRAKDT  EKR AT+CQRE+ FYIDTVRAFRDRRYE+KGLTK W K++AKAE  GD +AA  AR R VL+DSLQLAHKCILNSFYGYVMRKG+RW SMEM GVVT TGA LITQAR LVERIGRPLELDTDG
Sbjct:  463 VVSPETCAACEFNSADNAHQCKRVMEWTWRGEVFPATRAETD-MIRRQLETETFKAPPGWRPDGPARFGASSSSSSAGGAGEPERWVPYAELPPDERDLQLHKRLKMYCQRQYKRAKDTHVEKRHATICQREHPFYIDTVRAFRDRRYEYKGLTKKWVKELAKAEKGGDKLAAEAARTRVVLFDSLQLAHKCILNSFYGYVMRKGSRWFSMEMGGVVTQTGASLITQARMLVERIGRPLELDTDG 706          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A812Q0Y1_9DINO (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q0Y1_9DINO)

HSP 1 Score: 271 bits (694), Expect = 5.690e-81
Identity = 141/220 (64.09%), Postives = 167/220 (75.91%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDADGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            +V    CA+CDF+S     +C+R +EWVWRG+Y+P +R+E    +R   A   VE  DG P  + +LP   +   L +R+K YSQRVYKR KDT    +VAT+CQREN FY++TVRAFRDRRYE+KGLTKTW KK+  AE  GDA+    A+AR V YDSLQLAHKCILNSFYGYVMR+GARWHSMEMAGVVT+TGA LITQARELVERIGRPLELDTDG
Sbjct:  637 IVDETICASCDFNSP--EHKCKRDMEWVWRGEYYPLSRSE----LRRIEAQLEVEVVDGVP--YPELPREEREGALKRRVKEYSQRVYKRVKDTTETSKVATICQRENPFYVETVRAFRDRRYEYKGLTKTWVKKLVAAEKGGDALEIEAAKARVVYYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGVVTYTGATLITQARELVERIGRPLELDTDG 848          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A6G1RZE0_9GRUI (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Hypotaenidia okinawae TaxID=2861861 RepID=A0A6G1RZE0_9GRUI)

HSP 1 Score: 249 bits (637), Expect = 1.100e-80
Identity = 129/222 (58.11%), Postives = 158/222 (71.17%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVE--DADGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            MV  ATCAACDF+  G  A CQR + W WRG++ PA+R+E   + + QL +E       +G P  F +L    Q +   KRL  Y ++ YK+   T  E+RV T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK++ A   GDA      +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGA +ITQAREL+E+IGRPLELDTDG
Sbjct:   12 MVDEATCAACDFNKPG--ANCQRRMTWQWRGEFMPASRSEYHRI-QQQLESEKFPPLSPEGAPRAFHELSHEEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDG 230          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A670JRR4_PODMU (DNA polymerase epsilon catalytic subunit n=2 Tax=Laterata TaxID=1329976 RepID=A0A670JRR4_PODMU)

HSP 1 Score: 253 bits (647), Expect = 5.220e-77
Identity = 132/222 (59.46%), Postives = 161/222 (72.52%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDA--DGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            MV+ ATCAACDF+  G  A CQR + W WRG++ PA+R+E   + + QL +E       DG P  F +L    Q +   KRL  Y ++ YK+   T  E+RV T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK+A A  +GDA  A   +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGA +ITQAREL+E+IGRPLELDTDG
Sbjct:  305 MVNEATCAACDFNKPG--ANCQRRMTWQWRGEFMPASRSEYHRI-QQQLESEKFPPLFPDGPPRVFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLAAAMESGDASEAKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDG 523          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A4W5MAK6_9TELE (DNA polymerase epsilon catalytic subunit n=7 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A4W5MAK6_9TELE)

HSP 1 Score: 253 bits (646), Expect = 1.040e-76
Identity = 131/222 (59.01%), Postives = 160/222 (72.07%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDA--DGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            MV  ATCAACDF+  G  A CQR + W WRG+  PA+R+E   + + QL +E       +G P  F +L    Q     KRL  Y +R YK+ + T  E+RV T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK++ A+ +GDA      +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V +TGA +ITQARELVE+IGRPLELDTDG
Sbjct:  316 MVDEATCAACDFNKPG--ANCQRKMSWQWRGEIMPASRSEFHRI-QQQLESEKFPPLFPNGRPRAFHELNLEEQARHEKKRLGDYCRRAYKKVRQTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAQESGDAALVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGANIITQARELVEQIGRPLELDTDG 534          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: UPI001C9CC4F9 (DNA polymerase epsilon catalytic subunit A n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9CC4F9)

HSP 1 Score: 260 bits (665), Expect = 1.610e-76
Identity = 134/221 (60.63%), Postives = 166/221 (75.11%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDADGNPAR-FADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            +V+ A CAACDF+S G  A C+R +EW WRG+Y PA+  E + + R QL TETV+  DG+ AR F +LP   Q  L  KRL  Y ++ Y + K T  E R  TVCQ+EN+FY+DTVRAFRDRRYE+KGLTK   ++VA A A+GDA     A+ R+++YDSLQLAHKCILNSFYGYVMRKGARWHSMEM G+V HTGA +I +ARE++ER+GRPLELDTDG
Sbjct:  641 IVNEAVCAACDFNSPG--AACKREMEWAWRGEYLPASLGEFQRI-RQQLETETVKSEDGSTARPFHELPLPEQAALEKKRLSDYCRKAYAKTKVTKVEIRKQTVCQKENSFYVDTVRAFRDRRYEYKGLTKMAKQQVAAAIASGDASEIKSAKNREIIYDSLQLAHKCILNSFYGYVMRKGARWHSMEMGGIVCHTGANIIMRAREIIERVGRPLELDTDG 858          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A452IMM2_9SAUR (DNA polymerase epsilon catalytic subunit n=1 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452IMM2_9SAUR)

HSP 1 Score: 252 bits (643), Expect = 2.230e-76
Identity = 129/222 (58.11%), Postives = 159/222 (71.62%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDA--DGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            MV  ATCAACDF+  G  A CQR + W WRG++ PA+R+E   + + QL +E +     DG P  F +L    Q +   KRL  Y ++ YK+   T  E+R+ T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK++ A   GDA      +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGA +ITQAREL+E+IGRPLELDTDG
Sbjct:  283 MVDEATCAACDFNKPG--ANCQRRMTWQWRGEFMPASRSEYHRI-QQQLESEKLPPLYPDGPPRAFHELSREEQAKFEKKRLADYCRKAYKKLHVTKVEERITTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAATEMGDATEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDG 501          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: UPI00145531E7 (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145531E7)

HSP 1 Score: 259 bits (663), Expect = 3.000e-76
Identity = 134/222 (60.36%), Postives = 163/222 (73.42%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDAD-GNPAR-FADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            MV+  TCA CDF+  G  ARCQR L W+WRGD+ PATR E + + + QL  E +   + G P R F ++P   Q  +  KRL  Y ++ YK+ K T TE+R  T CQREN+FY+DTVRAFRDRRYEFKGL K W +KVA A   GDA     A+  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V +TGA +IT+ARE+VE+IGRPLELDTDG
Sbjct:  635 MVNEVTCAGCDFNKPG--ARCQRKLPWMWRGDFLPATRGEYQRI-KQQLEMERIPPVNPGEPPRVFHEIPREEQAAMEKKRLSDYCRKAYKKTKVTRTEERTTTTCQRENSFYVDTVRAFRDRRYEFKGLLKVWKRKVAAAIEKGDAAEIKSAKNTEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGASIITRAREIVEQIGRPLELDTDG 853          
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Match: A0A8C9L721_PAVCR (DNA polymerase epsilon catalytic subunit n=1 Tax=Pavo cristatus TaxID=9049 RepID=A0A8C9L721_PAVCR)

HSP 1 Score: 251 bits (640), Expect = 3.200e-76
Identity = 130/222 (58.56%), Postives = 158/222 (71.17%), Query Frame = 0
Query:    1 MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLATETVEDA--DGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRVATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAEARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLITQARELVERIGRPLELDTDG 220
            MV  ATCAACDF+  G  A CQR + W WRG++ PA+R+E   + + QL +E       DG P  F +L    Q +   KRL  Y ++ YK+   T  E+RV T+CQREN+FY+DTVRAFRDRRYEFKGL K W KK++ A   GDA      +  ++LYDSLQLAHKCILNSFYGYVMRKGARW+SMEMAG+V  TGA +ITQAREL+E+IGRPLELDTDG
Sbjct:  276 MVDEATCAACDFNKPG--ANCQRRMTWQWRGEFMPASRSEYHRI-QQQLESEKFPPLYPDGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAMETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDG 494          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101811.386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DJC1_CAFRO1.550e-8563.27DNA polymerase epsilon catalytic subunit n=1 Tax=C... [more]
A0A5A8BYB4_CAFRO2.190e-8563.27DNA polymerase epsilon catalytic subunit n=4 Tax=C... [more]
A0A812Q0Y1_9DINO5.690e-8164.09DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A6G1RZE0_9GRUI1.100e-8058.11DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A670JRR4_PODMU5.220e-7759.46DNA polymerase epsilon catalytic subunit n=2 Tax=L... [more]
A0A4W5MAK6_9TELE1.040e-7659.01DNA polymerase epsilon catalytic subunit n=7 Tax=E... [more]
UPI001C9CC4F91.610e-7660.63DNA polymerase epsilon catalytic subunit A n=1 Tax... [more]
A0A452IMM2_9SAUR2.230e-7658.11DNA polymerase epsilon catalytic subunit n=1 Tax=G... [more]
UPI00145531E73.000e-7660.36DNA polymerase epsilon catalytic subunit A-like n=... [more]
A0A8C9L721_PAVCR3.200e-7658.56DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023211DNA polymerase, palm domain superfamilyGENE3D3.90.1600.10coord: 45..198
e-value: 1.9E-16
score: 62.0
IPR006134DNA-directed DNA polymerase, family B, multifunctional domainPFAMPF00136DNA_pol_Bcoord: 140..209
e-value: 2.2E-9
score: 36.5
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..220
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..220
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 87..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101811contigM-pyrifera_M_contig101811:3..662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101811.386.1mRNA_M-pyrifera_M_contig101811.386.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig101811 3..665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig101811.386.1 ID=prot_M-pyrifera_M_contig101811.386.1|Name=mRNA_M-pyrifera_M_contig101811.386.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp
MVSPATCAACDFSSVGDSARCQRHLEWVWRGDYFPATRAETEGVVRHQLA
TETVEDADGNPARFADLPPSRQHELLVKRLKTYSQRVYKRAKDTATEKRV
ATVCQRENAFYIDTVRAFRDRRYEFKGLTKTWSKKVAKAEAAGDAIAAAE
ARARQVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGVVTHTGARLI
TQARELVERIGRPLELDTDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023211DNA_pol_palm_dom_sf
IPR006134DNA-dir_DNA_pol_B_multi_dom
IPR029703POL2