mRNA_M-pyrifera_M_contig101760.364.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A2E4FSV6_9BACT (Cyclic nucleotide-binding protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E4FSV6_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 7.870e-7 Identity = 36/102 (35.29%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 4 DVVLHEGQAPDCMYQLLTGAVRVHK-----GPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRV 294 +V++ EG+ ++ LLTG + V K P +ATLH+G + GE+SF+ + SA VV +S + V L + + LR L+ DP A F+ L L R+ Sbjct: 32 EVLIEEGRPLSDVFVLLTGELSVVKRALPDSP--VATLHEGEIVGELSFLDSRPPSATVVANSNS-VTLAISRDELRVKLSSDPSFAAHFYRALGVFLATRL 130
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A7X6C8Q3_9CYAN (Mechanosensitive ion channel n=1 Tax=Microcoleus sp. SU_5_3 TaxID=2720482 RepID=A0A7X6C8Q3_9CYAN) HSP 1 Score: 55.8 bits (133), Expect = 8.730e-7 Identity = 38/105 (36.19%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 309 G VV E D Y +L+G+V V K ++IATLH+G FGEIS +L +A V S+ A++ ++ L+KLL + P L +A L R A+ D Sbjct: 375 GQVVCKENDPGDSFYIILSGSVEVLYQKADQYIATLHEGEFFGEISLLLGTPRTATVRT-SEDAILFVVERHDLQKLLEEQPNLAD----QIAQKLSERQQALRD 474
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A4U0N5_9PROT (Transcriptional regulator, Crp/Fnr family n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=A4U0N5_9PROT) HSP 1 Score: 55.1 bits (131), Expect = 1.320e-6 Identity = 31/87 (35.63%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 1 GDVVLHEGQAPDCMYQLLTGAVRVHK----GPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLG 249 G+ ++ EG++ D +Y + GAV + K GPR +ATLH G +FGE+S +T SA V + V L L + L L+ + P++ Sbjct: 182 GEDIVREGESGDRLYVIFRGAVTITKHLPDGPRQLATLHSGQIFGEMSIFEAETRSATVTATEETEV-LSLDQDHLHSLIQQRPEIS 267
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: V6EWY7_MAGGM (Putative cyclic nucleotide-binding domain protein n=2 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=V6EWY7_MAGGM) HSP 1 Score: 55.1 bits (131), Expect = 1.730e-6 Identity = 31/87 (35.63%), Postives = 49/87 (56.32%), Query Frame = 1 Query: 1 GDVVLHEGQAPDCMYQLLTGAVRVHK----GPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLG 249 G+ ++ EG++ D +Y + GAV + K GPR +ATLH G +FGE+S +T SA V + V L L + L L+ + P++ Sbjct: 922 GEDIVREGESGDRLYVIFRGAVTITKHLPDGPRQLATLHSGQIFGEMSIFEAETRSATVTATEETEV-LSLDQDHLHSLIQQRPEIS 1007
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A7X6HUE4_9CYAN (Mechanosensitive ion channel n=1 Tax=Microcoleus sp. SU_5_6 TaxID=2720483 RepID=A0A7X6HUE4_9CYAN) HSP 1 Score: 53.9 bits (128), Expect = 4.140e-6 Identity = 36/105 (34.29%), Postives = 53/105 (50.48%), Query Frame = 1 Query: 1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 309 G ++ E D Y +L+GAV V K R+IATLH+G FGEIS +L +A V + ++ ++ L+KLL + P L +A L R A+ D Sbjct: 375 GQIICKENDPGDSFYIILSGAVEVLSQKADRYIATLHEGEFFGEISLLLGAPRTATVRTMEDS-IIFVVEHHDLQKLLVEQPNLAD----QIAQKLSERQQALRD 474
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: UPI00187E5E53 (mechanosensitive ion channel n=4 Tax=Microcoleaceae TaxID=1892252 RepID=UPI00187E5E53) HSP 1 Score: 53.5 bits (127), Expect = 5.640e-6 Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 309 G +V E D Y +L+GAV V K ++IATLH+G FGEIS +L +A V S+ +++ ++ L+KLL + P L +A L R A+ D Sbjct: 372 GQIVCKENAPGDSFYIILSGAVEVLSQKTDQYIATLHEGEFFGEISLLLGTPRTATVKT-SEDSILFVVERHDLQKLLVEQPNLAD----QIAQKLSERQQALRD 471
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A317IFG8_9BACT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A317IFG8_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 7.640e-6 Identity = 28/101 (27.72%), Postives = 54/101 (53.47%), Query Frame = 1 Query: 10 VLHEGQAPDCMYQLLTGAVRVHKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMNDE 312 ++ EG+ CMY +L G V+VHKG + +A L+ FGE++ + +T SA V + ++ + E ++ P++ + +LC R+ A+N++ Sbjct: 50 IVKEGEFGSCMYIILDGIVKVHKGNQLLAKLYRKDFFGELALLDTETRSASVTAETDC-MLFRIDQESFYDMIESRPEVVKG----VIKMLCKRIRAVNEQ 145
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A355CK50_9CYAN (Cyclic nucleotide-binding domain-containing protein n=3 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A355CK50_9CYAN) HSP 1 Score: 53.1 bits (126), Expect = 7.700e-6 Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 309 G VV E + Y +L+GAV V K ++IATLH+G FGEIS +L +A V ++ A++ ++ L+KLL + P L +A L R A+ D Sbjct: 372 GQVVCKENDPGNSFYIILSGAVEVLSQKADKYIATLHEGEFFGEISLLLGTPRTATVRT-TEDAILFVVERHDLQKLLVEQPNLAD----QIAQKLSERQQALRD 471
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A2T1E4J5_9CYAN (Cyclic nucleotide-binding domain-containing protein n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T1E4J5_9CYAN) HSP 1 Score: 52.8 bits (125), Expect = 1.050e-5 Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 309 G +V E D Y +L+GAV V K ++IATLH+G FGEIS +L +A V S+ +++ ++ L+KLL + P L +A L R A+ D Sbjct: 372 GQIVCKEDAPGDSFYIILSGAVEVLSQKTNQYIATLHEGEFFGEISLLLGTPRTATVKT-SEDSILFVVERHDLQKLLIEQPNLAD----QIAQKLSERQQALRD 471
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A6M0C7L6_9CYAN (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Okeania sp. SIO2H7 TaxID=2607802 RepID=A0A6M0C7L6_9CYAN) HSP 1 Score: 52.4 bits (124), Expect = 1.090e-5 Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 1 Query: 7 VVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLG 249 V+ E + D Y +L+GAV V K ++IATLH+G FGE+S +L +A V Q +V+ ++ L+KLL + P L Sbjct: 131 VIFEENDSGDSFYVILSGAVEVISQKTGQYIATLHEGEFFGEMSLLLGSPRTATVRTM-QDSVLFIIEQHDLKKLLEEQPDLA 212 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101760.364.1 >prot_M-pyrifera_M_contig101760.364.1 ID=prot_M-pyrifera_M_contig101760.364.1|Name=mRNA_M-pyrifera_M_contig101760.364.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp GDVVLHEGQAPDCMYQLLTGAVRVHKGPRFIATLHDGALFGEISFMLQQTback to top mRNA from alignment at M-pyrifera_M_contig101760:15..498+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101760.364.1 ID=mRNA_M-pyrifera_M_contig101760.364.1|Name=mRNA_M-pyrifera_M_contig101760.364.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=484bp|location=Sequence derived from alignment at M-pyrifera_M_contig101760:15..498+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101760:15..498+ >mRNA_M-pyrifera_M_contig101760.364.1 ID=mRNA_M-pyrifera_M_contig101760.364.1|Name=mRNA_M-pyrifera_M_contig101760.364.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig101760:15..498+ (Macrocystis pyrifera P11B4 male)back to top |