prot_M-pyrifera_M_contig101760.364.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig101760.364.1
Unique Name	prot_M-pyrifera_M_contig101760.364.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	108

Homology

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A2E4FSV6_9BACT (Cyclic nucleotide-binding protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E4FSV6_9BACT)

HSP 1 Score: 54.7 bits (130), Expect = 7.870e-7
Identity = 36/102 (35.29%), Postives = 56/102 (54.90%), Query Frame = 0

Query:    2 DVVLHEGQAPDCMYQLLTGAVRVHK-----GPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRV 98
            +V++ EG+    ++ LLTG + V K      P  +ATLH+G + GE+SF+  +  SA VV +S + V L +  + LR  L+ DP   A F+  L   L  R+
Sbjct:   32 EVLIEEGRPLSDVFVLLTGELSVVKRALPDSP--VATLHEGEIVGELSFLDSRPPSATVVANSNS-VTLAISRDELRVKLSSDPSFAAHFYRALGVFLATRL 130

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A7X6C8Q3_9CYAN (Mechanosensitive ion channel n=1 Tax=Microcoleus sp. SU_5_3 TaxID=2720482 RepID=A0A7X6C8Q3_9CYAN)

HSP 1 Score: 55.8 bits (133), Expect = 8.730e-7
Identity = 38/105 (36.19%), Postives = 55/105 (52.38%), Query Frame = 0

Query:    1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 103
            G VV  E    D  Y +L+G+V V   K  ++IATLH+G  FGEIS +L    +A V   S+ A++  ++   L+KLL + P L       +A  L  R  A+ D
Sbjct:  375 GQVVCKENDPGDSFYIILSGSVEVLYQKADQYIATLHEGEFFGEISLLLGTPRTATVRT-SEDAILFVVERHDLQKLLEEQPNLAD----QIAQKLSERQQALRD 474

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A4U0N5_9PROT (Transcriptional regulator, Crp/Fnr family n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=A4U0N5_9PROT)

HSP 1 Score: 55.1 bits (131), Expect = 1.320e-6
Identity = 31/87 (35.63%), Postives = 49/87 (56.32%), Query Frame = 0

Query:    1 GDVVLHEGQAPDCMYQLLTGAVRVHK----GPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLG 83
            G+ ++ EG++ D +Y +  GAV + K    GPR +ATLH G +FGE+S    +T SA V    +  V L L  + L  L+ + P++ 
Sbjct:  182 GEDIVREGESGDRLYVIFRGAVTITKHLPDGPRQLATLHSGQIFGEMSIFEAETRSATVTATEETEV-LSLDQDHLHSLIQQRPEIS 267

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: V6EWY7_MAGGM (Putative cyclic nucleotide-binding domain protein n=2 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=V6EWY7_MAGGM)

HSP 1 Score: 55.1 bits (131), Expect = 1.730e-6
Identity = 31/87 (35.63%), Postives = 49/87 (56.32%), Query Frame = 0

Query:    1 GDVVLHEGQAPDCMYQLLTGAVRVHK----GPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLG 83
            G+ ++ EG++ D +Y +  GAV + K    GPR +ATLH G +FGE+S    +T SA V    +  V L L  + L  L+ + P++ 
Sbjct:  922 GEDIVREGESGDRLYVIFRGAVTITKHLPDGPRQLATLHSGQIFGEMSIFEAETRSATVTATEETEV-LSLDQDHLHSLIQQRPEIS 1007

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A7X6HUE4_9CYAN (Mechanosensitive ion channel n=1 Tax=Microcoleus sp. SU_5_6 TaxID=2720483 RepID=A0A7X6HUE4_9CYAN)

HSP 1 Score: 53.9 bits (128), Expect = 4.140e-6
Identity = 36/105 (34.29%), Postives = 53/105 (50.48%), Query Frame = 0

Query:    1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 103
            G ++  E    D  Y +L+GAV V   K  R+IATLH+G  FGEIS +L    +A V     + ++  ++   L+KLL + P L       +A  L  R  A+ D
Sbjct:  375 GQIICKENDPGDSFYIILSGAVEVLSQKADRYIATLHEGEFFGEISLLLGAPRTATVRTMEDS-IIFVVEHHDLQKLLVEQPNLAD----QIAQKLSERQQALRD 474

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: UPI00187E5E53 (mechanosensitive ion channel n=4 Tax=Microcoleaceae TaxID=1892252 RepID=UPI00187E5E53)

HSP 1 Score: 53.5 bits (127), Expect = 5.640e-6
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 0

Query:    1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 103
            G +V  E    D  Y +L+GAV V   K  ++IATLH+G  FGEIS +L    +A V   S+ +++  ++   L+KLL + P L       +A  L  R  A+ D
Sbjct:  372 GQIVCKENAPGDSFYIILSGAVEVLSQKTDQYIATLHEGEFFGEISLLLGTPRTATVKT-SEDSILFVVERHDLQKLLVEQPNLAD----QIAQKLSERQQALRD 471

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A317IFG8_9BACT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A317IFG8_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 7.640e-6
Identity = 28/101 (27.72%), Postives = 54/101 (53.47%), Query Frame = 0

Query:    4 VLHEGQAPDCMYQLLTGAVRVHKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMNDE 104
            ++ EG+   CMY +L G V+VHKG + +A L+    FGE++ +  +T SA V   +   ++  +  E    ++   P++       +  +LC R+ A+N++
Sbjct:   50 IVKEGEFGSCMYIILDGIVKVHKGNQLLAKLYRKDFFGELALLDTETRSASVTAETDC-MLFRIDQESFYDMIESRPEVVKG----VIKMLCKRIRAVNEQ 145

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A355CK50_9CYAN (Cyclic nucleotide-binding domain-containing protein n=3 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A355CK50_9CYAN)

HSP 1 Score: 53.1 bits (126), Expect = 7.700e-6
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 0

Query:    1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 103
            G VV  E    +  Y +L+GAV V   K  ++IATLH+G  FGEIS +L    +A V   ++ A++  ++   L+KLL + P L       +A  L  R  A+ D
Sbjct:  372 GQVVCKENDPGNSFYIILSGAVEVLSQKADKYIATLHEGEFFGEISLLLGTPRTATVRT-TEDAILFVVERHDLQKLLVEQPNLAD----QIAQKLSERQQALRD 471

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A2T1E4J5_9CYAN (Cyclic nucleotide-binding domain-containing protein n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T1E4J5_9CYAN)

HSP 1 Score: 52.8 bits (125), Expect = 1.050e-5
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 0

Query:    1 GDVVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLAMND 103
            G +V  E    D  Y +L+GAV V   K  ++IATLH+G  FGEIS +L    +A V   S+ +++  ++   L+KLL + P L       +A  L  R  A+ D
Sbjct:  372 GQIVCKEDAPGDSFYIILSGAVEVLSQKTNQYIATLHEGEFFGEISLLLGTPRTATVKT-SEDSILFVVERHDLQKLLIEQPNLAD----QIAQKLSERQQALRD 471

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BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Match: A0A6M0C7L6_9CYAN (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Okeania sp. SIO2H7 TaxID=2607802 RepID=A0A6M0C7L6_9CYAN)

HSP 1 Score: 52.4 bits (124), Expect = 1.090e-5
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 0

Query:    3 VVLHEGQAPDCMYQLLTGAVRV--HKGPRFIATLHDGALFGEISFMLQQTASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLG 83
            V+  E  + D  Y +L+GAV V   K  ++IATLH+G  FGE+S +L    +A V    Q +V+  ++   L+KLL + P L 
Sbjct:  131 VIFEENDSGDSFYVILSGAVEVISQKTGQYIATLHEGEFFGEMSLLLGSPRTATVRTM-QDSVLFIIEQHDLKKLLEEQPDLA 212

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig101760.364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
A0A2E4FSV6_9BACT	7.870e-7	35.29	Cyclic nucleotide-binding protein n=1 Tax=Acidobac...	[more]
A0A7X6C8Q3_9CYAN	8.730e-7	36.19	Mechanosensitive ion channel n=1 Tax=Microcoleus s...	[more]
A4U0N5_9PROT	1.320e-6	35.63	Transcriptional regulator, Crp/Fnr family n=1 Tax=...	[more]
V6EWY7_MAGGM	1.730e-6	35.63	Putative cyclic nucleotide-binding domain protein ...	[more]
A0A7X6HUE4_9CYAN	4.140e-6	34.29	Mechanosensitive ion channel n=1 Tax=Microcoleus s...	[more]
UPI00187E5E53	5.640e-6	35.24	mechanosensitive ion channel n=4 Tax=Microcoleacea...	[more]
A0A317IFG8_9BACT	7.640e-6	27.72	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A355CK50_9CYAN	7.700e-6	35.24	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A2T1E4J5_9CYAN	1.050e-5	35.24	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A6M0C7L6_9CYAN	1.090e-5	37.35	Cyclic nucleotide-binding domain-containing protei...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 1..106 e-value: 1.4E-18 score: 69.0
IPR000595	Cyclic nucleotide-binding domain	PFAM	PF00027	cNMP_binding	coord: 1..79 e-value: 2.4E-15 score: 56.4
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 1..76 score: 14.715
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 1..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig101760	contig	M-pyrifera_M_contig101760:15..498 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig101760.364.1	mRNA_M-pyrifera_M_contig101760.364.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig101760 15..498 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig101760.364.1 ID=prot_M-pyrifera_M_contig101760.364.1|Name=mRNA_M-pyrifera_M_contig101760.364.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
GDVVLHEGQAPDCMYQLLTGAVRVHKGPRFIATLHDGALFGEISFMLQQT
ASADVVVHSQAAVVLCLKLEPLRKLLNKDPKLGACFFYYLATVLCPRVLA
MNDEATT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR000595	cNMP-bd_dom
IPR018490	cNMP-bd-like