mRNA_M-pyrifera_M_contig101685.349.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A3D5DI24_9GAMM (PQQ-dependent dehydrogenase, methanol/ethanol family (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DI24_9GAMM) HSP 1 Score: 447 bits (1150), Expect = 2.710e-157 Identity = 202/222 (90.99%), Postives = 215/222 (96.85%), Query Frame = 1 Query: 1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVAL+AKTGE+VWSVKNGDPKLG+TNTNAPHVMKDKVITG+SGAEFGVRCWINAYNLSDG WRAYSMGPDEDML+DP KTTSLGQP+GKDSSLKTW+GDQWKIGGGSTWGWWP+DKERNA Y GTGNPSTWNPVVRPGDNKWSMSIFSRDVDTG+AHWVYQMTPHDEWD DG+NEMILVD++VKGK+ Sbjct: 24 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALDAKTGEVVWSVKNGDPKLGETNTNAPHVMKDKVITGISGAEFGVRCWINAYNLSDGSLAWRAYSMGPDEDMLMDPEKTTSLGQPVGKDSSLKTWEGDQWKIGGGSTWGWWPFDKERNAFYVGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGIAHWVYQMTPHDEWDYDGVNEMILVDLEVKGKE 245
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A1S9D1X3_9GAMM (Methanol dehydrogenase [cytochrome c] subunit 1 n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9D1X3_9GAMM) HSP 1 Score: 383 bits (983), Expect = 5.700e-128 Identity = 169/222 (76.13%), Postives = 197/222 (88.74%), Query Frame = 1 Query: 1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666 +YDETVPVMCCDTVNRG+ Y DGKI L QA+T LVA++AKTG+ VWSVKNGDPK G+TNTNAPHV+KDKV+TG+SG EFGV ++ AYN+ DGK W+AYS+GPD+ ML+DP KTT LG+PIGKDSSLKTWKGDQWK GGG+TWGW+ YDKE N +YYG+GNP TWNPVVRPGDNKWSM+IF+RDVDTG+A WVYQMTPHDEWD DG+NEMIL D+KVKG+D Sbjct: 126 NYDETVPVMCCDTVNRGVAYADGKIFLHQANTELVAIDAKTGKKVWSVKNGDPKRGETNTNAPHVIKDKVVTGISGGEFGVHGFLAAYNIKDGKLAWKAYSVGPDDQMLIDPEKTTELGKPIGKDSSLKTWKGDQWKTGGGTTWGWYAYDKELNLVYYGSGNPGTWNPVVRPGDNKWSMTIFARDVDTGVAKWVYQMTPHDEWDYDGVNEMILADIKVKGED 347
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A3M1MNB9_9DELT (PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1MNB9_9DELT) HSP 1 Score: 374 bits (959), Expect = 6.600e-124 Identity = 179/251 (71.31%), Postives = 195/251 (77.69%), Query Frame = 1 Query: 1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNG-----------DPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTW------------KG-------DQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGK 663 +YDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVA++AKTG+ VWS KNG PK G TNTNAPHV+KDKV TG SGAEFGVRCWI AYNL DG WRA+SMGPDED+LVDP KTT LG+P+GK+SSLK+W KG DQWKIGGGS WGWWPY K+ N +YYG GNP WNPVVRPGDNKWSMSI++RDVDTGMA WVYQMTPHDEWD DGINEM+L D VKGK Sbjct: 126 NYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVAIDAKTGKKVWSTKNGADIPPEKGGPYGPKNGMTNTNAPHVIKDKVFTGCSGAEFGVRCWIAAYNLKDGSLAWRAFSMGPDEDILVDPNKTTMLGKPVGKNSSLKSWCAGKTDANWKWNKGGDCAKTSDQWKIGGGSVWGWWPYRKDLNLMYYGNGNPGVWNPVVRPGDNKWSMSIWARDVDTGMAKWVYQMTPHDEWDYDGINEMVLRDCNVKGK 376
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: UPI00188CB55D (thiol dehydrotransferase n=2 Tax=Noviherbaspirillum TaxID=1344552 RepID=UPI00188CB55D) HSP 1 Score: 363 bits (932), Expect = 2.270e-120 Identity = 163/220 (74.09%), Postives = 190/220 (86.36%), Query Frame = 1 Query: 16 VPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQ----PIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGK 663 +PVMCCDTVNRG+ YGDGKI+LQQADTTLVAL+AKTG+ VW VKNGDPK+G+TNTNAPH+ KDKVITG+SG EFGVR + AY+L+ GK VW+ YS+GPD +ML+DP KT + P+GKDSS+KTWKGDQWKIGGG+TWGW+ YD E N +YYGTGNPSTWNP RPGDNKWSM+IF+RD+DTGMA WVYQMTPHDEWD DG+NEMIL D+KVKGK Sbjct: 123 IPVMCCDTVNRGVAYGDGKIILQQADTTLVALDAKTGKEVWKVKNGDPKIGETNTNAPHIFKDKVITGISGGEFGVRGRLVAYDLATGKEVWKGYSVGPDNEMLIDPDKTMTWTDGKMAPVGKDSSIKTWKGDQWKIGGGTTWGWYSYDPETNLVYYGTGNPSTWNPSQRPGDNKWSMTIFARDLDTGMAKWVYQMTPHDEWDYDGVNEMILADIKVKGK 342
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: UPI00047C0A1C (methanol/ethanol family PQQ-dependent dehydrogenase n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI00047C0A1C) HSP 1 Score: 362 bits (929), Expect = 9.560e-120 Identity = 166/228 (72.81%), Postives = 194/228 (85.09%), Query Frame = 1 Query: 1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKT-TSLG-----QPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666 D DET+PVMCCDTVNRGL YGDGKI+LQQADTTL AL+AKTG++VW VKNGDPKLG TNTNAP V+KDKV+TG+SG EFGVR +I AYNL DGK W+AYS GPD+++ VDP KT T +G QP+ KDSSLKTW+GDQWKIGGG+TWGW+ YD + N +YYG+GNPSTWNPV RPGDNKWSM+I++RD DTG+A WVYQMTPHDEWD DGINEM+L D K+ GK+ Sbjct: 119 DPDETIPVMCCDTVNRGLAYGDGKIILQQADTTLTALDAKTGKVVWQVKNGDPKLGMTNTNAPLVVKDKVLTGISGGEFGVRGFIAAYNLKDGKLAWKAYSTGPDDEIKVDPEKTMTWMGKDKGLQPVDKDSSLKTWEGDQWKIGGGTTWGWYSYDPKLNLVYYGSGNPSTWNPVQRPGDNKWSMTIWARDADTGVAKWVYQMTPHDEWDYDGINEMVLADQKINGKE 346
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A432RKT3_9GAMM (PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Methylococcus sp. TaxID=39769 RepID=A0A432RKT3_9GAMM) HSP 1 Score: 361 bits (926), Expect = 2.100e-119 Identity = 162/220 (73.64%), Postives = 186/220 (84.55%), Query Frame = 1 Query: 7 DETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666 DET+PVMCCDTVNRGL YGDGKI L QADTTLVAL+AKTG VWSVKNGDPKLG TNT+AP V+KDKVI G+SG EFGVR ++ AYN DG W+ YSMGPD D L+DP +TTS+GQP+G+DSSLKTWKGDQWKIGGG+TWGW+ YD +YYG+GNPSTWNP RPGDNKWSMS+++R+VDTG WVYQMTPHDEWD DGINE++LVD K+ GKD Sbjct: 122 DETIPVMCCDTVNRGLAYGDGKIYLLQADTTLVALDAKTGTRVWSVKNGDPKLGMTNTSAPFVVKDKVIVGISGGEFGVRGFLAAYNAKDGTLAWKGYSMGPDADTLIDPKETTSMGQPVGEDSSLKTWKGDQWKIGGGTTWGWYAYDSALGLVYYGSGNPSTWNPSQRPGDNKWSMSLWARNVDTGAVKWVYQMTPHDEWDYDGINEVVLVDQKMDGKD 341
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A1G0GDU3_9GAMM (Methanol dehydrogenase n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0GDU3_9GAMM) HSP 1 Score: 362 bits (928), Expect = 2.500e-119 Identity = 167/239 (69.87%), Postives = 187/239 (78.24%), Query Frame = 1 Query: 1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTW------------------KGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGK 663 D+DETVPVMCCDTVNRGL YGDGKI LQQADT LVAL A G +VWS KNGDPK GQTNTNAPH MKDKV TG++GAEFGVRCW+ AYN SDG W+AYSMGPDE++L D KTTS+G+ +GKDSSLKTW DQWK GGGSTWGWW D + N +YYG+GNPSTWNPVVRPGDNKWSM++F+RD+DTG+A WVYQMTPHDEWD DGINEMIL D + GK Sbjct: 125 DFDETVPVMCCDTVNRGLAYGDGKIYLQQADTVLVALKANDGSVVWSTKNGDPKKGQTNTNAPHPMKDKVFTGIAGAEFGVRCWMAAYNASDGSLAWKAYSMGPDEEILFDD-KTTSMGKAVGKDSSLKTWCADKDWKAPARGPSSCKSLSDQWKTGGGSTWGWWAADFDENLMYYGSGNPSTWNPVVRPGDNKWSMTMFARDIDTGIARWVYQMTPHDEWDYDGINEMILADQNIGGK 362
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A7Z1AE18_9GAMM (Methanol dehydrogenase [cytochrome c] subunit 1 n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7Z1AE18_9GAMM) HSP 1 Score: 359 bits (922), Expect = 6.680e-119 Identity = 160/216 (74.07%), Postives = 185/216 (85.65%), Query Frame = 1 Query: 16 VPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGK 663 +PVMCCDTVNRGL YGDGKI+L QADTTLVAL+AKTG+ +WSV NGDP G+T+T AP V+KDKV G+SG EFGVR + AYNL DGK WRAYSMGPD D L+DP KTT LG+P+GKDS + TWKGDQWKIGGG+TWGW+ YD + N +YYG+GNPSTWNPV RPGDN+WSM+IF+RDVDTG+A WVYQMTPHDEWD DGINEMILVD ++KGK Sbjct: 126 IPVMCCDTVNRGLAYGDGKIILSQADTTLVALDAKTGKKIWSVVNGDPSKGETSTAAPMVVKDKVFIGISGGEFGVRGSMTAYNLKDGKLAWRAYSMGPDSDTLLDPQKTTHLGKPVGKDSGINTWKGDQWKIGGGATWGWYSYDPDLNLMYYGSGNPSTWNPVQRPGDNRWSMTIFARDVDTGIAKWVYQMTPHDEWDYDGINEMILVDKEIKGK 341
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: UPI00037C4149 (methanol/ethanol family PQQ-dependent dehydrogenase n=1 Tax=Methyloferula stellata TaxID=876270 RepID=UPI00037C4149) HSP 1 Score: 359 bits (922), Expect = 7.280e-119 Identity = 159/217 (73.27%), Postives = 182/217 (83.87%), Query Frame = 1 Query: 16 VPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666 +PVMCCDTVNRGL YGDGKI L QADTTLVAL+AKTG +VWSVK+GDP G T T+AP VMKDKV G+SG EFGV+ W++AYN+ DGK WR YSMGPD L+DP KTTSLG+P+GKDSSL TW+GDQWKIGGG+TWGW+ YD N +YYG+GNPSTWNP RPGDNKWSM+I++RDVDTG A WVYQMTPHDEWD DGINEMIL D K+ GK+ Sbjct: 122 IPVMCCDTVNRGLSYGDGKIFLHQADTTLVALDAKTGSVVWSVKDGDPSKGATGTDAPFVMKDKVFIGVSGGEFGVQSWVSAYNIKDGKLAWRGYSMGPDSQTLIDPEKTTSLGKPVGKDSSLSTWEGDQWKIGGGATWGWYSYDPALNLIYYGSGNPSTWNPNQRPGDNKWSMTIWARDVDTGQAKWVYQMTPHDEWDYDGINEMILTDQKIDGKE 338
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A1G0K2W9_9GAMM (Methanol dehydrogenase n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K2W9_9GAMM) HSP 1 Score: 360 bits (924), Expect = 1.120e-118 Identity = 167/247 (67.61%), Postives = 189/247 (76.52%), Query Frame = 1 Query: 10 ETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNG-----DPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTW-----------------------KGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666 ETVPVMCCD VNRGLG+GDGKILLQQADT LVALNAK G++VW +NG PK G T TNAPHV+KDKV TG SGAEFGVRCWI A+NL DGK WR +SMGPD D+++DP K+ S+G+P+GKDSSL+TW +GDQWK GGGSTWGWWP D +N +YYG GNP TWNPVVRPGDNKWSMSI++RD+DTGM WVYQMTPHDEWD DG+NEMIL DMKVKGKD Sbjct: 127 ETVPVMCCDIVNRGLGFGDGKILLQQADTLLVALNAKDGKVVWKAENGRDIGYGPKAGNTTTNAPHVIKDKVFTGCSGAEFGVRCWIAAFNLKDGKLAWRGFSMGPDSDIILDPNKSMSMGKPVGKDSSLRTWCAEGDWDKNELRANDQGKRECSKRGDQWKQGGGSTWGWWPADFGKNLMYYGNGNPGTWNPVVRPGDNKWSMSIWARDIDTGMVAWVYQMTPHDEWDFDGVNEMILADMKVKGKD 373 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101685.349.1 >prot_M-pyrifera_M_contig101685.349.1 ID=prot_M-pyrifera_M_contig101685.349.1|Name=mRNA_M-pyrifera_M_contig101685.349.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp MCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTback to top mRNA from alignment at M-pyrifera_M_contig101685:2..667- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101685.349.1 ID=mRNA_M-pyrifera_M_contig101685.349.1|Name=mRNA_M-pyrifera_M_contig101685.349.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig101685:2..667- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101685:2..667- >mRNA_M-pyrifera_M_contig101685.349.1 ID=mRNA_M-pyrifera_M_contig101685.349.1|Name=mRNA_M-pyrifera_M_contig101685.349.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig101685:2..667- (Macrocystis pyrifera P11B4 male)back to top |