mRNA_M-pyrifera_M_contig101685.349.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101685.349.1
Unique NamemRNA_M-pyrifera_M_contig101685.349.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A3D5DI24_9GAMM (PQQ-dependent dehydrogenase, methanol/ethanol family (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DI24_9GAMM)

HSP 1 Score: 447 bits (1150), Expect = 2.710e-157
Identity = 202/222 (90.99%), Postives = 215/222 (96.85%), Query Frame = 1
Query:    1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666
            DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVAL+AKTGE+VWSVKNGDPKLG+TNTNAPHVMKDKVITG+SGAEFGVRCWINAYNLSDG   WRAYSMGPDEDML+DP KTTSLGQP+GKDSSLKTW+GDQWKIGGGSTWGWWP+DKERNA Y GTGNPSTWNPVVRPGDNKWSMSIFSRDVDTG+AHWVYQMTPHDEWD DG+NEMILVD++VKGK+
Sbjct:   24 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALDAKTGEVVWSVKNGDPKLGETNTNAPHVMKDKVITGISGAEFGVRCWINAYNLSDGSLAWRAYSMGPDEDMLMDPEKTTSLGQPVGKDSSLKTWEGDQWKIGGGSTWGWWPFDKERNAFYVGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGIAHWVYQMTPHDEWDYDGVNEMILVDLEVKGKE 245          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A1S9D1X3_9GAMM (Methanol dehydrogenase [cytochrome c] subunit 1 n=1 Tax=Chromatiales bacterium USCg_Taylor TaxID=1934255 RepID=A0A1S9D1X3_9GAMM)

HSP 1 Score: 383 bits (983), Expect = 5.700e-128
Identity = 169/222 (76.13%), Postives = 197/222 (88.74%), Query Frame = 1
Query:    1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666
            +YDETVPVMCCDTVNRG+ Y DGKI L QA+T LVA++AKTG+ VWSVKNGDPK G+TNTNAPHV+KDKV+TG+SG EFGV  ++ AYN+ DGK  W+AYS+GPD+ ML+DP KTT LG+PIGKDSSLKTWKGDQWK GGG+TWGW+ YDKE N +YYG+GNP TWNPVVRPGDNKWSM+IF+RDVDTG+A WVYQMTPHDEWD DG+NEMIL D+KVKG+D
Sbjct:  126 NYDETVPVMCCDTVNRGVAYADGKIFLHQANTELVAIDAKTGKKVWSVKNGDPKRGETNTNAPHVIKDKVVTGISGGEFGVHGFLAAYNIKDGKLAWKAYSVGPDDQMLIDPEKTTELGKPIGKDSSLKTWKGDQWKTGGGTTWGWYAYDKELNLVYYGSGNPGTWNPVVRPGDNKWSMTIFARDVDTGVAKWVYQMTPHDEWDYDGVNEMILADIKVKGED 347          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A3M1MNB9_9DELT (PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1MNB9_9DELT)

HSP 1 Score: 374 bits (959), Expect = 6.600e-124
Identity = 179/251 (71.31%), Postives = 195/251 (77.69%), Query Frame = 1
Query:    1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNG-----------DPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTW------------KG-------DQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGK 663
            +YDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVA++AKTG+ VWS KNG            PK G TNTNAPHV+KDKV TG SGAEFGVRCWI AYNL DG   WRA+SMGPDED+LVDP KTT LG+P+GK+SSLK+W            KG       DQWKIGGGS WGWWPY K+ N +YYG GNP  WNPVVRPGDNKWSMSI++RDVDTGMA WVYQMTPHDEWD DGINEM+L D  VKGK
Sbjct:  126 NYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVAIDAKTGKKVWSTKNGADIPPEKGGPYGPKNGMTNTNAPHVIKDKVFTGCSGAEFGVRCWIAAYNLKDGSLAWRAFSMGPDEDILVDPNKTTMLGKPVGKNSSLKSWCAGKTDANWKWNKGGDCAKTSDQWKIGGGSVWGWWPYRKDLNLMYYGNGNPGVWNPVVRPGDNKWSMSIWARDVDTGMAKWVYQMTPHDEWDYDGINEMVLRDCNVKGK 376          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: UPI00188CB55D (thiol dehydrotransferase n=2 Tax=Noviherbaspirillum TaxID=1344552 RepID=UPI00188CB55D)

HSP 1 Score: 363 bits (932), Expect = 2.270e-120
Identity = 163/220 (74.09%), Postives = 190/220 (86.36%), Query Frame = 1
Query:   16 VPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQ----PIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGK 663
            +PVMCCDTVNRG+ YGDGKI+LQQADTTLVAL+AKTG+ VW VKNGDPK+G+TNTNAPH+ KDKVITG+SG EFGVR  + AY+L+ GK VW+ YS+GPD +ML+DP KT +       P+GKDSS+KTWKGDQWKIGGG+TWGW+ YD E N +YYGTGNPSTWNP  RPGDNKWSM+IF+RD+DTGMA WVYQMTPHDEWD DG+NEMIL D+KVKGK
Sbjct:  123 IPVMCCDTVNRGVAYGDGKIILQQADTTLVALDAKTGKEVWKVKNGDPKIGETNTNAPHIFKDKVITGISGGEFGVRGRLVAYDLATGKEVWKGYSVGPDNEMLIDPDKTMTWTDGKMAPVGKDSSIKTWKGDQWKIGGGTTWGWYSYDPETNLVYYGTGNPSTWNPSQRPGDNKWSMTIFARDLDTGMAKWVYQMTPHDEWDYDGVNEMILADIKVKGK 342          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: UPI00047C0A1C (methanol/ethanol family PQQ-dependent dehydrogenase n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI00047C0A1C)

HSP 1 Score: 362 bits (929), Expect = 9.560e-120
Identity = 166/228 (72.81%), Postives = 194/228 (85.09%), Query Frame = 1
Query:    1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKT-TSLG-----QPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666
            D DET+PVMCCDTVNRGL YGDGKI+LQQADTTL AL+AKTG++VW VKNGDPKLG TNTNAP V+KDKV+TG+SG EFGVR +I AYNL DGK  W+AYS GPD+++ VDP KT T +G     QP+ KDSSLKTW+GDQWKIGGG+TWGW+ YD + N +YYG+GNPSTWNPV RPGDNKWSM+I++RD DTG+A WVYQMTPHDEWD DGINEM+L D K+ GK+
Sbjct:  119 DPDETIPVMCCDTVNRGLAYGDGKIILQQADTTLTALDAKTGKVVWQVKNGDPKLGMTNTNAPLVVKDKVLTGISGGEFGVRGFIAAYNLKDGKLAWKAYSTGPDDEIKVDPEKTMTWMGKDKGLQPVDKDSSLKTWEGDQWKIGGGTTWGWYSYDPKLNLVYYGSGNPSTWNPVQRPGDNKWSMTIWARDADTGVAKWVYQMTPHDEWDYDGINEMVLADQKINGKE 346          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A432RKT3_9GAMM (PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Methylococcus sp. TaxID=39769 RepID=A0A432RKT3_9GAMM)

HSP 1 Score: 361 bits (926), Expect = 2.100e-119
Identity = 162/220 (73.64%), Postives = 186/220 (84.55%), Query Frame = 1
Query:    7 DETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666
            DET+PVMCCDTVNRGL YGDGKI L QADTTLVAL+AKTG  VWSVKNGDPKLG TNT+AP V+KDKVI G+SG EFGVR ++ AYN  DG   W+ YSMGPD D L+DP +TTS+GQP+G+DSSLKTWKGDQWKIGGG+TWGW+ YD     +YYG+GNPSTWNP  RPGDNKWSMS+++R+VDTG   WVYQMTPHDEWD DGINE++LVD K+ GKD
Sbjct:  122 DETIPVMCCDTVNRGLAYGDGKIYLLQADTTLVALDAKTGTRVWSVKNGDPKLGMTNTSAPFVVKDKVIVGISGGEFGVRGFLAAYNAKDGTLAWKGYSMGPDADTLIDPKETTSMGQPVGEDSSLKTWKGDQWKIGGGTTWGWYAYDSALGLVYYGSGNPSTWNPSQRPGDNKWSMSLWARNVDTGAVKWVYQMTPHDEWDYDGINEVVLVDQKMDGKD 341          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A1G0GDU3_9GAMM (Methanol dehydrogenase n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0GDU3_9GAMM)

HSP 1 Score: 362 bits (928), Expect = 2.500e-119
Identity = 167/239 (69.87%), Postives = 187/239 (78.24%), Query Frame = 1
Query:    1 DYDETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTW------------------KGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGK 663
            D+DETVPVMCCDTVNRGL YGDGKI LQQADT LVAL A  G +VWS KNGDPK GQTNTNAPH MKDKV TG++GAEFGVRCW+ AYN SDG   W+AYSMGPDE++L D  KTTS+G+ +GKDSSLKTW                    DQWK GGGSTWGWW  D + N +YYG+GNPSTWNPVVRPGDNKWSM++F+RD+DTG+A WVYQMTPHDEWD DGINEMIL D  + GK
Sbjct:  125 DFDETVPVMCCDTVNRGLAYGDGKIYLQQADTVLVALKANDGSVVWSTKNGDPKKGQTNTNAPHPMKDKVFTGIAGAEFGVRCWMAAYNASDGSLAWKAYSMGPDEEILFDD-KTTSMGKAVGKDSSLKTWCADKDWKAPARGPSSCKSLSDQWKTGGGSTWGWWAADFDENLMYYGSGNPSTWNPVVRPGDNKWSMTMFARDIDTGIARWVYQMTPHDEWDYDGINEMILADQNIGGK 362          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A7Z1AE18_9GAMM (Methanol dehydrogenase [cytochrome c] subunit 1 n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7Z1AE18_9GAMM)

HSP 1 Score: 359 bits (922), Expect = 6.680e-119
Identity = 160/216 (74.07%), Postives = 185/216 (85.65%), Query Frame = 1
Query:   16 VPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGK 663
            +PVMCCDTVNRGL YGDGKI+L QADTTLVAL+AKTG+ +WSV NGDP  G+T+T AP V+KDKV  G+SG EFGVR  + AYNL DGK  WRAYSMGPD D L+DP KTT LG+P+GKDS + TWKGDQWKIGGG+TWGW+ YD + N +YYG+GNPSTWNPV RPGDN+WSM+IF+RDVDTG+A WVYQMTPHDEWD DGINEMILVD ++KGK
Sbjct:  126 IPVMCCDTVNRGLAYGDGKIILSQADTTLVALDAKTGKKIWSVVNGDPSKGETSTAAPMVVKDKVFIGISGGEFGVRGSMTAYNLKDGKLAWRAYSMGPDSDTLLDPQKTTHLGKPVGKDSGINTWKGDQWKIGGGATWGWYSYDPDLNLMYYGSGNPSTWNPVQRPGDNRWSMTIFARDVDTGIAKWVYQMTPHDEWDYDGINEMILVDKEIKGK 341          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: UPI00037C4149 (methanol/ethanol family PQQ-dependent dehydrogenase n=1 Tax=Methyloferula stellata TaxID=876270 RepID=UPI00037C4149)

HSP 1 Score: 359 bits (922), Expect = 7.280e-119
Identity = 159/217 (73.27%), Postives = 182/217 (83.87%), Query Frame = 1
Query:   16 VPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666
            +PVMCCDTVNRGL YGDGKI L QADTTLVAL+AKTG +VWSVK+GDP  G T T+AP VMKDKV  G+SG EFGV+ W++AYN+ DGK  WR YSMGPD   L+DP KTTSLG+P+GKDSSL TW+GDQWKIGGG+TWGW+ YD   N +YYG+GNPSTWNP  RPGDNKWSM+I++RDVDTG A WVYQMTPHDEWD DGINEMIL D K+ GK+
Sbjct:  122 IPVMCCDTVNRGLSYGDGKIFLHQADTTLVALDAKTGSVVWSVKDGDPSKGATGTDAPFVMKDKVFIGVSGGEFGVQSWVSAYNIKDGKLAWRGYSMGPDSQTLIDPEKTTSLGKPVGKDSSLSTWEGDQWKIGGGATWGWYSYDPALNLIYYGSGNPSTWNPNQRPGDNKWSMTIWARDVDTGQAKWVYQMTPHDEWDYDGINEMILTDQKIDGKE 338          
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Match: A0A1G0K2W9_9GAMM (Methanol dehydrogenase n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K2W9_9GAMM)

HSP 1 Score: 360 bits (924), Expect = 1.120e-118
Identity = 167/247 (67.61%), Postives = 189/247 (76.52%), Query Frame = 1
Query:   10 ETVPVMCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNG-----DPKLGQTNTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDMLVDPMKTTSLGQPIGKDSSLKTW-----------------------KGDQWKIGGGSTWGWWPYDKERNALYYGTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGINEMILVDMKVKGKD 666
            ETVPVMCCD VNRGLG+GDGKILLQQADT LVALNAK G++VW  +NG      PK G T TNAPHV+KDKV TG SGAEFGVRCWI A+NL DGK  WR +SMGPD D+++DP K+ S+G+P+GKDSSL+TW                       +GDQWK GGGSTWGWWP D  +N +YYG GNP TWNPVVRPGDNKWSMSI++RD+DTGM  WVYQMTPHDEWD DG+NEMIL DMKVKGKD
Sbjct:  127 ETVPVMCCDIVNRGLGFGDGKILLQQADTLLVALNAKDGKVVWKAENGRDIGYGPKAGNTTTNAPHVIKDKVFTGCSGAEFGVRCWIAAFNLKDGKLAWRGFSMGPDSDIILDPNKSMSMGKPVGKDSSLRTWCAEGDWDKNELRANDQGKRECSKRGDQWKQGGGSTWGWWPADFGKNLMYYGNGNPGTWNPVVRPGDNKWSMSIWARDIDTGMVAWVYQMTPHDEWDFDGVNEMILADMKVKGKD 373          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101685.349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DI24_9GAMM2.710e-15790.99PQQ-dependent dehydrogenase, methanol/ethanol fami... [more]
A0A1S9D1X3_9GAMM5.700e-12876.13Methanol dehydrogenase [cytochrome c] subunit 1 n=... [more]
A0A3M1MNB9_9DELT6.600e-12471.31PQQ-dependent dehydrogenase, methanol/ethanol fami... [more]
UPI00188CB55D2.270e-12074.09thiol dehydrotransferase n=2 Tax=Noviherbaspirillu... [more]
UPI00047C0A1C9.560e-12072.81methanol/ethanol family PQQ-dependent dehydrogenas... [more]
A0A432RKT3_9GAMM2.100e-11973.64PQQ-dependent dehydrogenase, methanol/ethanol fami... [more]
A0A1G0GDU3_9GAMM2.500e-11969.87Methanol dehydrogenase n=1 Tax=Gammaproteobacteria... [more]
A0A7Z1AE18_9GAMM6.680e-11974.07Methanol dehydrogenase [cytochrome c] subunit 1 n=... [more]
UPI00037C41497.280e-11973.27methanol/ethanol family PQQ-dependent dehydrogenas... [more]
A0A1G0K2W9_9GAMM1.120e-11867.61Methanol dehydrogenase n=1 Tax=Gammaproteobacteria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101685contigM-pyrifera_M_contig101685:2..667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score352.8
Seed ortholog evalue1.1e-94
Seed eggNOG ortholog675812.VHA_002085
Preferred namemxaF
KEGG rclassRC00087,RC00088,RC01039
KEGG koko:K00114
KEGG ReactionR05062,R05198,R05285
KEGG Pathwayko00010,ko00625,ko01100,ko01110,ko01120,ko01130,map00010,map00625,map01100,map01110,map01120,map01130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PQQ enzyme repeat
EggNOG OGs1MUQX@1224,1RN5D@1236,1Y0DT@135623,COG4993@1,COG4993@2
EC1.1.2.8
COG Functional cat.G
Best tax levelVibrionales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size666
Cds size642
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815515.2851424-CDS-M-pyrifera_M_contig101685:1..6431622815515.2851424-CDS-M-pyrifera_M_contig101685:1..643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101685 2..643 -
1692277445.952597-CDS-M-pyrifera_M_contig101685:1..6431692277445.952597-CDS-M-pyrifera_M_contig101685:1..643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101685 2..643 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815515.2982998-UTR-M-pyrifera_M_contig101685:643..6671622815515.2982998-UTR-M-pyrifera_M_contig101685:643..667Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101685 644..667 -
1692277445.963687-UTR-M-pyrifera_M_contig101685:643..6671692277445.963687-UTR-M-pyrifera_M_contig101685:643..667Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101685 644..667 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101685.349.1prot_M-pyrifera_M_contig101685.349.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101685 2..643 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101685.349.1

>prot_M-pyrifera_M_contig101685.349.1 ID=prot_M-pyrifera_M_contig101685.349.1|Name=mRNA_M-pyrifera_M_contig101685.349.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp
MCCDTVNRGLGYGDGKILLQQADTTLVALNAKTGELVWSVKNGDPKLGQT
NTNAPHVMKDKVITGMSGAEFGVRCWINAYNLSDGKRVWRAYSMGPDEDM
LVDPMKTTSLGQPIGKDSSLKTWKGDQWKIGGGSTWGWWPYDKERNALYY
GTGNPSTWNPVVRPGDNKWSMSIFSRDVDTGMAHWVYQMTPHDEWDDDGI
NEMILVDMKVKGKD
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mRNA from alignment at M-pyrifera_M_contig101685:2..667-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101685.349.1 ID=mRNA_M-pyrifera_M_contig101685.349.1|Name=mRNA_M-pyrifera_M_contig101685.349.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig101685:2..667- (Macrocystis pyrifera P11B4 male)
GATTACGACGAAACCGTCCCAGTGATGTGCTGCGATACGGTGAACCGTGG TCTTGGTTACGGTGATGGCAAGATCCTGTTACAGCAGGCCGACACCACGT TGGTCGCGTTGAACGCGAAAACTGGTGAGTTGGTTTGGTCTGTCAAGAAC GGCGATCCGAAACTCGGACAAACGAATACAAACGCTCCGCATGTGATGAA AGACAAAGTCATCACGGGTATGTCGGGCGCGGAATTCGGTGTTCGTTGCT GGATCAATGCCTATAACCTCAGCGATGGTAAGCGCGTGTGGCGCGCCTAC AGCATGGGACCTGACGAGGATATGCTCGTCGATCCGATGAAAACAACGTC GCTTGGTCAACCCATCGGCAAGGATTCTTCACTGAAAACCTGGAAAGGTG ATCAATGGAAAATCGGTGGTGGTTCGACCTGGGGCTGGTGGCCGTACGAT AAAGAGCGTAATGCCCTTTACTACGGTACCGGTAATCCGTCGACATGGAA CCCGGTTGTTCGCCCCGGCGACAACAAGTGGTCGATGTCGATTTTCTCGC GTGACGTAGACACTGGTATGGCCCATTGGGTTTACCAGATGACGCCTCAC GATGAGTGGGATGACGACGGCATCAATGAAATGATCCTCGTCGACATGAA GGTCAAGGGTAAAGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101685:2..667-

>mRNA_M-pyrifera_M_contig101685.349.1 ID=mRNA_M-pyrifera_M_contig101685.349.1|Name=mRNA_M-pyrifera_M_contig101685.349.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig101685:2..667- (Macrocystis pyrifera P11B4 male)
ATGTGCTGCGATACGGTGAACCGTGGTCTTGGTTACGGTGATGGCAAGAT
CCTGTTACAGCAGGCCGACACCACGTTGGTCGCGTTGAACGCGAAAACTG
GTGAGTTGGTTTGGTCTGTCAAGAACGGCGATCCGAAACTCGGACAAACG
AATACAAACGCTCCGCATGTGATGAAAGACAAAGTCATCACGGGTATGTC
GGGCGCGGAATTCGGTGTTCGTTGCTGGATCAATGCCTATAACCTCAGCG
ATGGTAAGCGCGTGTGGCGCGCCTACAGCATGGGACCTGACGAGGATATG
CTCGTCGATCCGATGAAAACAACGTCGCTTGGTCAACCCATCGGCAAGGA
TTCTTCACTGAAAACCTGGAAAGGTGATCAATGGAAAATCGGTGGTGGTT
CGACCTGGGGCTGGTGGCCGTACGATAAAGAGCGTAATGCCCTTTACTAC
GGTACCGGTAATCCGTCGACATGGAACCCGGTTGTTCGCCCCGGCGACAA
CAAGTGGTCGATGTCGATTTTCTCGCGTGACGTAGACACTGGTATGGCCC
ATTGGGTTTACCAGATGACGCCTCACGATGAGTGGGATGACGACGGCATC
AATGAAATGATCCTCGTCGACATGAAGGTCAAGGGTAAAGACATGTGCTG
CGATACGGTGAACCGTGGTCTTGGTTACGGTGATGGCAAGATCCTGTTAC
AGCAGGCCGACACCACGTTGGTCGCGTTGAACGCGAAAACTGGTGAGTTG
GTTTGGTCTGTCAAGAACGGCGATCCGAAACTCGGACAAACGAATACAAA
CGCTCCGCATGTGATGAAAGACAAAGTCATCACGGGTATGTCGGGCGCGG
AATTCGGTGTTCGTTGCTGGATCAATGCCTATAACCTCAGCGATGGTAAG
CGCGTGTGGCGCGCCTACAGCATGGGACCTGACGAGGATATGCTCGTCGA
TCCGATGAAAACAACGTCGCTTGGTCAACCCATCGGCAAGGATTCTTCAC
TGAAAACCTGGAAAGGTGATCAATGGAAAATCGGTGGTGGTTCGACCTGG
GGCTGGTGGCCGTACGATAAAGAGCGTAATGCCCTTTACTACGGTACCGG
TAATCCGTCGACATGGAACCCGGTTGTTCGCCCCGGCGACAACAAGTGGT
CGATGTCGATTTTCTCGCGTGACGTAGACACTGGTATGGCCCATTGGGTT
TACCAGATGACGCCTCACGATGAGTGGGATGACGACGGCATCAATGAAAT
GATCCTCGTCGACATGAAGGTCAAGGGTAAAGAC
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