mRNA_M-pyrifera_M_contig100157.33.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: D7G2A4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A4_ECTSI) HSP 1 Score: 125 bits (314), Expect = 3.620e-34 Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 1 Query: 1 PLLQDAKVSACFCTMGVGKPSK-----SSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGANADLKPSRFGGATAGGGLYLGTKGKV 258 PLL+DA V+ACF TMGVGKPSK ++REEFEKVDL IPTAFA+AS+ AGCV+HISLL SVGA+A KPSR G AGGGLYLG KGKV Sbjct: 39 PLLRDAGVAACFVTMGVGKPSKVKSEQATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRITGTAAGGGLYLGVKGKV 129
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: A0A6H5K5V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V5_9PHAE) HSP 1 Score: 111 bits (277), Expect = 3.090e-29 Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 43 MGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGANADLKPSRFGGATAGGGLYLGTKGKV 258 MGVGKPSK++REEFEKVDL IPTAFA+AS+ AGCV+HISLL SVGA+A KPSR G AGGGLYLG KGKV Sbjct: 1 MGVGKPSKATREEFEKVDLEIPTAFAQASKSAGCVRHISLLGSVGADATAKPSRITGTAAGGGLYLGVKGKV 72
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: A0A7S0EJ53_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EJ53_9EUKA) HSP 1 Score: 77.0 bits (188), Expect = 3.980e-15 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 4 LLQDAKVSACFCTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGANADLKPSRF---GGATAGGGLYLGTKGKV 258 L + SA F MGVG PSKS+ EE ++D +P AFA A++ AG V+H+S+LS+VGA+ + KP F G +AGGGLY KGK+ Sbjct: 78 LKEAGDASAAFNLMGVGTPSKSTEEELTRIDFAVPAAFASAAKAAG-VRHLSVLSAVGADKEAKPGGFLGFGKTSAGGGLYNMLKGKI 164
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: UPI000F8ECE50 (NAD(P)H-binding protein n=1 Tax=Pararhodobacter zhoushanensis TaxID=2479545 RepID=UPI000F8ECE50) HSP 1 Score: 62.0 bits (149), Expect = 5.320e-10 Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 28 ACFCTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGAN 183 A CT+GVG+PSK+SREEF +VD IP AF +A RDAG V H LL++VG++ Sbjct: 67 AALCTLGVGEPSKASREEFTRVDHDIPLAFGQACRDAG-VAHFGLLAAVGSD 117
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: A0A1I3IR16_9RHOB (Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains n=1 Tax=Jannaschia pohangensis TaxID=390807 RepID=A0A1I3IR16_9RHOB) HSP 1 Score: 59.7 bits (143), Expect = 8.300e-9 Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 25 SACFCTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGANADLKPSRF 207 S C +GVG+PSK +R+EF ++D IP FA A+R AG V H LLSSVGANA PS F Sbjct: 61 SVAICCLGVGEPSKVTRDEFRRIDHDIPLGFATAARAAG-VGHFLLLSSVGANA-ASPSFF 119
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: A0A848VQ17_9BACT (NAD(P)H-binding protein n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A848VQ17_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 2.330e-8 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 37 CTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGANADLKPSRFGGATAGGGLYLGTKGKV 258 CT+G+G+PSK SREEFE+VD FAKA + AG V+H +LLSSVGA D S + YL TKG++ Sbjct: 74 CTLGIGQPSKVSREEFERVDHDYVLDFAKACKAAG-VRHFALLSSVGA--DAGSSNY---------YLRTKGRL 135
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: UPI001F1EFF47 (NAD(P)H-binding protein n=1 Tax=Portibacter lacus TaxID=1099794 RepID=UPI001F1EFF47) HSP 1 Score: 57.4 bits (137), Expect = 5.980e-8 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 1 Query: 34 FCTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGANADLK 195 FCT+GVG+PSK SRE+F KVD FAKA + AG V H LL+SVG + + K Sbjct: 70 FCTLGVGQPSKVSREDFRKVDYTAVLEFAKACKAAG-VDHFQLLASVGIDPNAK 122
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: A0A1H9GEU9_9BACT (NAD(P)H-binding n=2 Tax=Lewinella agarilytica TaxID=478744 RepID=A0A1H9GEU9_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 8.720e-8 Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 28 ACFCTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGANA 186 A CT+GVG+PSK SREEF K+D FA+A R AG V H LLSSVG +A Sbjct: 77 AAICTLGVGQPSKMSREEFLKIDKQAVIDFARACRQAG-VAHFELLSSVGVDA 128
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: UPI000367E4FA (NAD(P)H-binding protein n=1 Tax=Lewinella persica TaxID=70998 RepID=UPI000367E4FA) HSP 1 Score: 56.6 bits (135), Expect = 1.180e-7 Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 34 FCTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVG 177 CT+GVG+PSK S+EEFEK+D + FAKA + AG V+H LLSSVG Sbjct: 72 ICTLGVGEPSKISKEEFEKIDKLAVIDFAKACKVAG-VQHFELLSSVG 118
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Match: A0A4R9LRT4_9LEPT (NAD(P)-bd_dom domain-containing protein n=2 Tax=Leptospira ilyithenensis TaxID=2484901 RepID=A0A4R9LRT4_9LEPT) HSP 1 Score: 56.2 bits (134), Expect = 1.680e-7 Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 1 Query: 34 FCTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKHISLLSSVGANADLKPSRFGGATAGGGLYLGTKGKV 258 CT+GVG+PSK SREEF ++D FAK + G VKH LL SVGA D K S F YL TKG++ Sbjct: 68 ICTLGVGEPSKMSREEFVRIDKDAVLDFAKTCKSKG-VKHFLLLGSVGA--DKKSSSF---------YLRTKGEI 130 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100157.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100157.33.1 >prot_M-pyrifera_M_contig100157.33.1 ID=prot_M-pyrifera_M_contig100157.33.1|Name=mRNA_M-pyrifera_M_contig100157.33.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp PLLQDAKVSACFCTMGVGKPSKSSREEFEKVDLVIPTAFAKASRDAGCVKback to top mRNA from alignment at M-pyrifera_M_contig100157:240..497- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100157.33.1 ID=mRNA_M-pyrifera_M_contig100157.33.1|Name=mRNA_M-pyrifera_M_contig100157.33.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=258bp|location=Sequence derived from alignment at M-pyrifera_M_contig100157:240..497- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100157:240..497- >mRNA_M-pyrifera_M_contig100157.33.1 ID=mRNA_M-pyrifera_M_contig100157.33.1|Name=mRNA_M-pyrifera_M_contig100157.33.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig100157:240..497- (Macrocystis pyrifera P11B4 male)back to top |